Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 5.0e-87 324.3 155 100.0
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 4.3e-46 188.3 155 63.2
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 2.2e-42 176.0 125 73.6
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 8.4e-42 174.1 160 58.8
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 1.4e-41 173.3 164 57.3
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 4.6e-40 168.3 164 56.7
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 6.0e-40 167.9 164 56.7
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 1.7e-39 166.4 161 54.0
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 3.0e-39 165.6 164 54.3
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 5.1e-39 164.9 159 56.0
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 6.6e-39 164.5 163 54.0
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 1.1e-38 163.7 165 55.2
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 1.5e-38 163.3 157 57.3
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 1.9e-38 162.9 155 56.8
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 2.5e-38 162.5 154 54.5
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 5.6e-38 161.4 156 55.8
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 1.3e-37 160.2 154 53.9
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 1.6e-37 159.8 155 56.8
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.4e-36 156.8 157 53.5
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 1.4e-36 156.8 157 54.8
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.8e-36 156.4 156 55.1
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.4e-36 156.0 157 53.5
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 2.4e-36 156.0 158 53.8
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 2.4e-36 156.0 157 51.6
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 3.1e-36 155.6 166 54.2
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 3.1e-36 155.6 158 50.6
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.0e-36 155.2 157 52.9
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 6.9e-36 154.5 164 53.7
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 6.9e-36 154.5 164 52.4
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 9.0e-36 154.1 156 53.8
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 1.2e-35 153.7 158 50.6
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 1.5e-35 153.3 156 53.8
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.5e-35 153.3 164 53.0
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.5e-35 153.3 158 51.9
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.5e-35 153.3 155 55.5
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 2.6e-35 152.5 156 53.2
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 4.5e-35 151.8 156 53.2
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 5.8e-35 151.4 157 52.2
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 5.8e-35 151.4 165 52.1
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 7.6e-35 151.0 156 52.6
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 2.2e-34 149.4 159 52.2
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 2.2e-34 149.4 158 52.5
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.9e-34 148.3 156 51.9
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 6.4e-34 147.9 165 50.9
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 1.4e-33 146.7 157 49.7
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 2.4e-33 146.0 163 49.1
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 3.2e-33 145.6 157 51.0
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.1e-32 142.9 154 51.9
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 3.5e-32 142.1 153 50.3
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 4.6e-32 141.7 152 49.3
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 4.6e-32 141.7 154 54.5
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 7.9e-32 141.0 155 52.9
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.3e-31 140.2 163 49.7
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.3e-31 139.4 184 48.9
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 6.7e-31 137.9 153 48.4
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 1.1e-30 137.1 155 48.4
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 1.9e-30 136.3 127 57.5
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 2.5e-30 136.0 161 48.4
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 2.5e-30 136.0 146 52.1
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 9.6e-30 134.0 143 51.0
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 1.3e-29 133.7 164 45.7
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.6e-29 133.3 160 50.0
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.6e-29 133.3 121 55.4
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 4.8e-29 131.7 160 48.8
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 1.1e-28 130.6 160 49.4
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 1.8e-28 129.8 154 44.2
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 3.1e-28 129.0 158 48.1
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 4.0e-28 128.6 151 46.4
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 6.9e-28 127.9 160 48.8
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 6.9e-28 127.9 154 48.1
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 6.9e-28 127.9 156 48.7
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 9.0e-28 127.5 165 43.0
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 1.5e-27 126.7 154 47.4
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 2.6e-27 125.9 170 48.2
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 4.5e-27 125.2 162 47.5
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 4.5e-27 125.2 167 43.7
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 5.8e-27 124.8 173 44.5
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 5.8e-27 124.8 167 43.7
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 7.6e-27 124.4 163 45.4
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 1.3e-26 123.6 174 45.4
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 1.7e-26 123.2 148 44.6
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 2.9e-26 122.5 174 44.8
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 2.9e-26 122.5 153 49.0
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 3.8e-26 122.1 153 43.8
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 4.9e-26 121.7 159 45.3
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 1.1e-25 120.6 154 44.8
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 1.4e-25 120.2 163 43.6
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 1.9e-25 119.8 171 42.7
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 1.6e-24 116.7 154 42.9
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 2.1e-24 116.3 154 42.9
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 2.7e-24 115.9 165 41.2
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 7.9e-24 114.4 149 45.6
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 7.9e-24 114.4 148 44.6
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 2.3e-23 112.8 173 41.0
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 3.0e-23 112.5 133 45.1
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 5.1e-23 111.7 154 42.2
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 1.9e-22 109.8 154 42.2
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 4.8e-21 105.1 119 46.2
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 2.4e-20 102.8 153 39.9
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 1.5e-19 100.1 169 40.2
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 2.6e-19 99.4 110 46.4
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 3.4e-19 99.0 140 40.0
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 5.8e-19 98.2 162 38.9
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 5.0e-18 95.1 137 43.1
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 4.6e-16 88.6 83 53.0
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.0e-15 87.4 133 40.6
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.3e-15 86.3 116 44.0
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.6e-13 80.1 117 37.6
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 3.7e-13 79.0 117 37.6
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 2.4e-12 76.3 116 36.2
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 5.0e-10 68.6 126 34.9
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 2.5e-09 66.2 136 33.1
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 5.5e-09 65.1 50 64.0
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 5.5e-09 65.1 50 64.0
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 9.4e-09 64.3 41 75.6
ATR1120G017 Amborella trichopoda HOM05D005413 ORTHO05D006536 1.2e-08 63.9 104 36.5
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 1.6e-08 63.5 41 75.6
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 2.1e-08 63.2 112 36.6
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 3.9e-07 58.9 99 39.4
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 5.1e-07 58.5 142 28.9
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.1e-06 57.4 74 37.8
SEGI_03865 Sequoiadendron giganteum HOM05D005413 ORTHO05D006536 1.5e-06 57.0 147 29.9


User provided reference genes

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