Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32877 Striga asiatica HOM05D006466 ORTHO05D008084 1.9e-104 382.9 243 100.0
MSTRG.12091 Avicennia marina HOM05D006466 ORTHO05D008084 1.1e-72 277.3 241 68.9
SalBow6G4398 Salvia bowleyana HOM05D006466 ORTHO05D008084 7.9e-63 244.6 183 71.6
Migut.A00968 Erythranthe guttata HOM05D006466 ORTHO05D008084 3.0e-62 242.7 248 69.4
unitig_61.g26196 Utricularia gibba HOM05D006466 ORTHO05D008084 7.7e-58 228.0 240 57.5
Ciclev10005762m.g Citrus clementina HOM05D006466 ORTHO05D008084 1.3e-52 210.7 243 55.1
Ah.12g056750 Amaranthus hybridus HOM05D006466 ORTHO05D008084 1.8e-51 206.8 242 51.2
Nitab4.5_0000312g0170 Nicotiana tabacum HOM05D006466 ORTHO05D008084 2.4e-51 206.5 241 60.6
Nitab4.5_0008481g0010 Nicotiana tabacum HOM05D006466 ORTHO05D008084 2.4e-51 206.5 240 57.9
Potri.001G123200 Populus trichocarpa HOM05D006466 ORTHO05D008084 2.6e-50 203.0 247 53.8
Thecc.03G253200 Theobroma cacao HOM05D006466 ORTHO05D008084 5.9e-50 201.8 243 56.8
Sabra01G0094900 Salix brachista HOM05D006466 ORTHO05D008084 1.0e-49 201.1 247 52.6
PGR031G1557 Punica granatum HOM05D006466 ORTHO05D008084 2.9e-49 199.5 243 53.9
QL12p012545 Quercus lobata HOM05D006466 ORTHO05D008084 6.5e-49 198.4 239 52.3
Eucgr.D02068 Eucalyptus grandis HOM05D006466 ORTHO05D008084 1.1e-48 197.6 238 53.4
ClCG01G004000 Citrullus lanatus HOM05D006466 ORTHO05D008084 1.9e-48 196.8 250 51.6
Gohir.A12G217700 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.9e-48 196.8 245 54.7
Atru.chr2.1841 Acer truncatum HOM05D006466 ORTHO05D008084 2.5e-48 196.4 243 53.1
Sopen08g027210 Solanum pennellii HOM05D006466 ORTHO05D008084 2.5e-48 196.4 242 51.2
Solyc08g078740.1 Solanum lycopersicum HOM05D006466 ORTHO05D008084 3.2e-48 196.1 240 50.0
PGSC0003DMG401004755 Solanum tuberosum HOM05D006466 ORTHO05D008084 5.5e-48 195.3 238 49.2
Lsat_1_v5_gn_3_521 Lactuca sativa HOM05D006466 ORTHO05D008084 1.2e-47 194.1 237 57.0
TWI81G0148 Tripterygium wilfordii HOM05D006466 ORTHO05D008084 2.1e-47 193.4 233 54.1
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 2.7e-47 193.0 235 53.2
Gohir.D12G220200 Gossypium hirsutum HOM05D006466 ORTHO05D008084 1.0e-46 191.0 245 53.9
Gorai.008G235900 Gossypium raimondii HOM05D006466 ORTHO05D008084 1.0e-46 191.0 245 53.5
Manes.01G079600 Manihot esculenta HOM05D006466 ORTHO05D008084 1.0e-46 191.0 244 55.3
MELO3C005537.2 Cucumis melo HOM05D006466 ORTHO05D008084 1.4e-46 190.7 239 50.2
Cc08_g12600 Coffea canephora HOM05D006466 ORTHO05D008084 1.8e-46 190.3 172 62.2
CsaV3_5G004180 Cucumis sativus L. HOM05D006466 ORTHO05D008084 1.8e-46 190.3 239 50.2
Lj4g0024258 Lotus japonicus HOM05D006466 ORTHO05D008084 1.8e-46 190.3 178 61.8
Manes.15G178400 Manihot esculenta HOM05D006466 ORTHO05D008084 5.2e-46 188.7 231 56.7
Hma1.2p1_2380F.1_g320960 Hydrangea macrophylla HOM05D006466 ORTHO05D008084 8.8e-46 188.0 237 51.5
Cfa012739 Carpinus fangiana HOM05D006466 ORTHO05D008084 9.7e-45 184.5 249 51.4
Lj1A353T9 Lonicera japonica HOM05D006466 ORTHO05D008084 1.3e-44 184.1 244 51.6
Haze_07889 Corylus avellana HOM05D006466 ORTHO05D008084 2.8e-44 183.0 252 51.6
Actinidia27463 Actinidia chinensis HOM05D006466 ORTHO05D008084 3.7e-44 182.6 246 49.6
Manes.15G178500 Manihot esculenta HOM05D006466 ORTHO05D008084 4.8e-44 182.2 231 55.0
SHI10480 Sapria himalayana HOM05D006466 ORTHO05D008084 1.8e-43 180.3 238 49.2
Peaxi162Scf00002g00172 Petunia axillaris HOM05D006466 ORTHO05D008084 3.1e-43 179.5 268 48.5
FAN04G2180 Fragaria x ananassa HOM05D006466 ORTHO05D008084 4.1e-43 179.1 249 50.6
GSVIVG01001313001 Vitis vinifera HOM05D006466 ORTHO05D008084 5.3e-43 178.7 247 56.7
RcHm_v2.0_Chr7g0203001 Rosa chinensis HOM05D006466 ORTHO05D008084 7.0e-43 178.3 240 51.2
FAN18G0606 Fragaria x ananassa HOM05D006466 ORTHO05D008084 9.1e-43 177.9 233 52.4
CANSAT21G1921 Cannabis sativa HOM05D006466 ORTHO05D008084 1.2e-42 177.6 237 55.7
Dinv39131 Davidia involucrata HOM05D006466 ORTHO05D008084 1.2e-42 177.6 233 51.5
ECA232G3467 Erigeron canadensis HOM05D006466 ORTHO05D008084 1.6e-42 177.2 234 59.8
Sed0012351 Sechium edule HOM05D006466 ORTHO05D008084 2.6e-42 176.4 231 48.9
FvH4_5g18710 Fragaria vesca HOM05D006466 ORTHO05D008084 7.7e-42 174.9 233 51.9
FAN08G0853 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.0e-41 174.5 180 58.9
FAN13G1623 Fragaria x ananassa HOM05D006466 ORTHO05D008084 1.0e-41 174.5 231 55.4
CiPaw.11G153200 Carya illinoinensis HOM05D006466 ORTHO05D008084 1.3e-41 174.1 246 49.6
Medtr4g101030 Medicago truncatula HOM05D006466 ORTHO05D008084 1.3e-41 174.1 249 54.2
Sed0026776 Sechium edule HOM05D006466 ORTHO05D008084 2.9e-41 172.9 250 47.6
Aa31LG2G12660 Aethionema arabicum HOM05D006466 ORTHO05D008084 5.0e-41 172.2 250 45.6
A03p49940 Brassica napus HOM05D006466 ORTHO05D008084 5.0e-41 172.2 254 53.5
BraA03t14087Z Brassica rapa HOM05D006466 ORTHO05D008084 5.0e-41 172.2 254 53.5
Thhalv10026056m.g Eutrema salsugineum HOM05D006466 ORTHO05D008084 6.5e-41 171.8 252 49.6
Cpa.g.sc29.144 Carica papaya HOM05D006466 ORTHO05D008084 8.5e-41 171.4 242 48.3
Rhsim07G0108000 Rhododendron simsii HOM05D006466 ORTHO05D008084 2.5e-40 169.9 164 61.6
BcaNung02868 Brassica carinata HOM05D006466 ORTHO05D008084 5.5e-40 168.7 256 44.9
HPP92_014482 Vanilla planifolia HOM05D006466 ORTHO05D008084 1.2e-39 167.5 251 46.2
Carub.0007s2494 Capsella rubella HOM05D006466 ORTHO05D008084 1.6e-39 167.2 253 45.5
Nn1g01036 Nelumbo nucifera HOM05D006466 ORTHO05D008084 1.6e-39 167.2 238 48.3
Psat4g071640 Pisum sativum HOM05D006466 ORTHO05D008084 2.7e-39 166.4 177 55.4
GSVIVG01030884001 Vitis vinifera HOM05D006466 ORTHO05D008084 2.7e-39 166.4 243 56.4
Sp7g15110 Schrenkiella parvula HOM05D006466 ORTHO05D008084 8.0e-39 164.9 259 44.4
CARHR222950 Cardamine hirsuta HOM05D006466 ORTHO05D008084 1.0e-38 164.5 256 44.9
Oeu019590.1 Olea europaea HOM05D006466 ORTHO05D008084 1.0e-38 164.5 238 50.4
arahy.Tifrunner.gnm1.ann1.MY6G43 Arachis hypogaea HOM05D006466 ORTHO05D008084 3.0e-38 162.9 180 53.3
BcaC06g33488 Brassica carinata HOM05D006466 ORTHO05D008084 3.0e-38 162.9 259 50.2
C07p47980 Brassica napus HOM05D006466 ORTHO05D008084 3.0e-38 162.9 259 50.2
BolC7t45321H Brassica oleracea HOM05D006466 ORTHO05D008084 3.0e-38 162.9 259 50.2
Prupe.5G071300 Prunus persica HOM05D006466 ORTHO05D008084 3.0e-38 162.9 172 57.0
CDE02G4728 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 5.2e-38 162.2 242 45.5
AL7G38350 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 8.8e-38 161.4 252 44.8
AL7G38400 Arabidopsis lyrata HOM05D006466 ORTHO05D008084 8.8e-38 161.4 252 44.8
TPR.G37616 Trifolium pratense HOM05D006466 ORTHO05D008084 8.8e-38 161.4 251 44.6
arahy.Tifrunner.gnm1.ann1.LISY29 Arachis hypogaea HOM05D006466 ORTHO05D008084 1.2e-37 161.0 247 50.2
MD04G1088600 Malus domestica HOM05D006466 ORTHO05D008084 1.5e-37 160.6 178 55.6
arahy.Tifrunner.gnm1.ann1.VT8LY8 Arachis hypogaea HOM05D006466 ORTHO05D008084 4.4e-37 159.1 246 48.0
PSO170G1975 Papaver somniferum HOM05D006466 ORTHO05D008084 3.7e-36 156.0 247 44.9
TAR375G0032 Trochodendron aralioides HOM05D006466 ORTHO05D008084 8.3e-36 154.8 234 48.7
arahy.Tifrunner.gnm1.ann1.HK6I2L Arachis hypogaea HOM05D006466 ORTHO05D008084 1.1e-35 154.5 240 48.3
PSO528G0015 Papaver somniferum HOM05D006466 ORTHO05D008084 1.1e-35 154.5 247 44.5
ATR0193G040 Amborella trichopoda HOM05D006466 ORTHO05D008084 4.1e-35 152.5 168 54.8
Lalb_Chr16g0389331 Lupinus albus HOM05D006466 ORTHO05D008084 4.1e-35 152.5 175 54.9
AT4G16535 Arabidopsis thaliana HOM05D006466 ORTHO05D008084 1.2e-34 151.0 253 43.5
AUR62007505 Chenopodium quinoa HOM05D006466 ORTHO05D008084 2.7e-34 149.8 174 51.1
Nn6g33981 Nelumbo nucifera HOM05D006466 ORTHO05D008084 2.7e-34 149.8 168 55.4
Phvul.003G219800 Phaseolus vulgaris HOM05D006466 ORTHO05D008084 3.5e-34 149.4 242 45.9
Lj8A452G56 Lonicera japonica HOM05D006466 ORTHO05D008084 1.0e-33 147.9 154 59.1
Aqoxy6G01886 Aquilegia oxysepala HOM05D006466 ORTHO05D008084 1.7e-33 147.1 248 45.6
Os10g0507500 Oryza sativa ssp. japonica HOM05D006466 ORTHO05D008084 6.5e-33 145.2 258 43.4
Eucgr.D02058 Eucalyptus grandis HOM05D006466 ORTHO05D008084 2.5e-32 143.3 236 45.8
Ca_21959_v3 Cicer arietinum L. HOM05D006466 ORTHO05D008084 3.2e-32 142.9 172 50.6
SEGI_30297 Sequoiadendron giganteum HOM05D006466 ORTHO05D008084 9.4e-32 141.4 248 42.7
VMungo0251G3296 Vigna mungo HOM05D006466 ORTHO05D008084 4.4e-29 132.5 241 42.7
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 3.1e-27 126.3 244 39.3
AUR62039958 Chenopodium quinoa HOM05D006466 ORTHO05D008084 4.1e-27 125.9 229 40.2
Glyma.17G140900 Glycine max HOM05D006466 ORTHO05D008084 1.7e-25 120.6 253 43.1
Pp3c3_19850 Physcomitrium patens HOM05D006466 ORTHO05D008084 1.7e-25 120.6 191 47.6
arahy.Tifrunner.gnm1.ann1.Y2DLV0 Arachis hypogaea HOM05D006466 ORTHO05D008084 1.6e-23 114.0 123 54.5
CDE11G0010 Ceratophyllum demersum HOM05D006466 ORTHO05D008084 2.1e-23 113.6 196 43.9
arahy.Tifrunner.gnm1.ann1.AC5BZW Arachis hypogaea HOM05D006466 ORTHO05D008084 3.6e-23 112.8 154 49.4
Mapoly0015s0012 Marchantia polymorpha HOM05D006466 ORTHO05D008084 6.8e-22 108.6 199 40.7
Oeu039628.1 Olea europaea HOM05D006466 ORTHO05D008084 3.3e-16 89.7 54 85.2
Zm00001eb044010 Zea mays HOM05D006466 ORTHO05D008084 1.6e-15 87.4 107 50.5
arahy.Tifrunner.gnm1.ann1.W2BU8F Arachis hypogaea HOM05D004339 ORTHO05D002389 1.0e-14 84.7 156 41.7
Eucgr.L01522 Eucalyptus grandis HOM05D006466 ORTHO05D008084 2.3e-14 83.6 50 84.0
HanXRQChr02g0051581 Helianthus annuus HOM05D006466 ORTHO05D008084 4.1e-11 72.8 113 44.2
unitig_0.g1068 Utricularia gibba HOM05D006466 ORTHO05D008084 6.0e-10 68.9 44 68.2
BcaC04g19403 Brassica carinata HOM05D006466 ORTHO05D008084 7.8e-10 68.6 146 46.6
BolC9t58475H Brassica oleracea HOM05D006466 ORTHO05D008084 7.8e-10 68.6 146 46.6
Sc22g0000810 Simmondsia chinensis HOM05D006466 ORTHO05D008084 5.0e-09 65.9 111 46.8
C03p73400 Brassica napus HOM05D006466 ORTHO05D008084 1.5e-08 64.3 84 47.6
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 1.9e-08 63.9 85 45.9
BcaC01g01648 Brassica carinata HOM05D006466 ORTHO05D008084 3.3e-08 63.2 78 50.0
C03p59450 Brassica napus HOM05D006466 ORTHO05D008084 2.8e-07 60.1 56 57.1
BraA04t17310Z Brassica rapa HOM05D006466 ORTHO05D008084 1.8e-06 57.4 79 44.3
CBR_g29445 Chara braunii HOM05D006466 ORTHO05D008084 3.1e-06 56.6 95 42.1
MCO04G315 Micromonas commoda HOM05D006430 ORTHO05D007585 8.9e-06 55.1 39 74.4


User provided reference genes

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