Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 2.3e-165 585.5 290 100.0
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.0e-93 347.4 303 64.4
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.9e-89 331.6 297 61.6
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 5.0e-88 328.6 290 62.8
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 4.2e-87 325.5 294 61.2
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 3.6e-86 322.4 293 62.5
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 6.1e-86 321.6 294 60.2
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 7.9e-86 321.2 296 59.8
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 3.0e-85 319.3 287 60.6
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 5.2e-85 318.5 293 60.1
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 6.7e-85 318.2 293 59.4
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 5.7e-84 315.1 305 58.7
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 2.2e-83 313.2 287 60.6
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 3.7e-83 312.4 289 59.5
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 6.3e-83 311.6 290 59.3
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 8.2e-83 311.2 294 58.2
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.1e-82 310.8 300 57.3
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.8e-82 310.1 287 58.5
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 3.1e-82 309.3 287 59.6
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 4.1e-82 308.9 292 58.6
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 7.0e-82 308.1 295 57.6
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 9.1e-82 307.8 295 58.6
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 1.6e-81 307.0 289 58.1
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.6e-81 306.2 287 57.5
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 6.5e-80 301.6 291 57.4
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 8.5e-80 301.2 291 58.1
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 1.1e-79 300.8 309 55.7
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.5e-79 300.4 289 57.4
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 1.5e-79 300.4 289 57.4
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 1.9e-79 300.1 291 58.1
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.9e-79 300.1 290 57.6
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.9e-79 300.1 293 56.3
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.9e-79 300.1 289 57.4
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 2.5e-79 299.7 289 57.8
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.5e-79 299.7 291 58.1
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 4.2e-79 298.9 290 57.2
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 5.5e-79 298.5 297 55.6
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.2e-78 297.4 290 55.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 1.6e-78 297.0 293 57.0
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 6.1e-78 295.0 292 56.5
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 6.1e-78 295.0 289 56.7
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 1.4e-77 293.9 293 56.7
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 1.8e-77 293.5 299 55.9
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.8e-77 293.5 294 56.5
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.0e-77 292.7 288 56.2
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.0e-77 292.7 291 56.4
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 4.0e-77 292.4 288 57.3
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.0e-77 292.4 288 56.9
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 8.8e-77 291.2 290 57.6
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 1.2e-76 290.8 281 57.3
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 2.6e-76 289.7 286 57.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 4.4e-76 288.9 290 55.9
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 4.4e-76 288.9 291 56.4
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 5.7e-76 288.5 288 54.9
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 1.3e-75 287.3 299 53.5
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 2.2e-75 286.6 290 55.2
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 2.8e-75 286.2 289 55.7
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 3.7e-75 285.8 240 62.1
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 3.7e-75 285.8 291 54.6
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.8e-75 285.4 289 55.0
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 4.8e-75 285.4 290 54.8
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.4e-74 283.9 290 54.5
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 3.1e-74 282.7 298 53.0
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 4.1e-74 282.3 285 55.1
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 4.1e-74 282.3 285 55.1
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 7.0e-74 281.6 300 54.0
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 2.0e-73 280.0 285 54.4
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 2.7e-73 279.6 284 55.6
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 4.5e-73 278.9 287 54.0
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 4.5e-73 278.9 285 54.4
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 5.9e-73 278.5 285 55.1
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 7.7e-73 278.1 293 52.9
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 7.7e-73 278.1 272 55.5
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 1.0e-72 277.7 288 53.5
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 1.3e-72 277.3 282 55.3
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.8e-72 275.8 364 45.9
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 2.5e-71 273.1 305 51.8
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 2.5e-71 273.1 283 53.4
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 3.2e-71 272.7 288 53.1
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 9.4e-71 271.2 288 52.4
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 1.2e-70 270.8 285 53.0
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 2.7e-70 269.6 285 52.6
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 2.3e-69 266.5 285 52.6
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 1.2e-68 264.2 244 57.4
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 1.5e-68 263.8 293 53.2
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 4.8e-67 258.8 292 49.7
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 2.0e-65 253.4 378 43.4
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 2.9e-64 249.6 293 48.1
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 8.5e-64 248.1 290 51.4
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.1e-63 247.7 295 49.5
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 7.2e-63 245.0 289 48.8
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 2.3e-61 240.0 289 47.8
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 5.7e-60 235.3 259 53.3
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.7e-59 233.8 150 80.7
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 6.3e-59 231.9 227 58.1
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 9.2e-58 228.0 244 50.0
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 4.5e-57 225.7 222 55.0
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 8.6e-56 221.5 247 49.0
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 8.6e-56 221.5 209 58.4
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 3.3e-55 219.5 304 44.7
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 8.0e-54 214.9 288 45.8
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 4.0e-45 186.0 248 42.7
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 8.3e-43 178.3 159 61.6
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.1e-42 177.9 153 65.4
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 2.6e-36 156.8 262 35.5
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 4.9e-35 152.5 164 53.7
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 7.3e-31 138.7 138 55.8
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 3.4e-28 129.8 191 44.0
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 3.4e-28 129.8 191 44.0
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.5e-25 119.8 275 30.2
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 3.0e-24 116.7 224 34.4
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.1e-22 110.5 179 40.2
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 5.8e-20 102.4 104 57.7
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 3.8e-19 99.8 210 34.3
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 4.9e-19 99.4 96 57.3
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 9.3e-18 95.1 210 33.3
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.2e-17 94.7 100 56.0
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 1.0e-16 91.7 119 45.4
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.3e-16 91.3 95 53.7
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 4.3e-15 86.3 107 45.8
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 9.9e-12 75.1 85 48.2
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 2.2e-11 73.9 48 68.8


User provided reference genes

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