Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32865 Striga asiatica HOM05D008749 ORTHO05D010891 1.8e-57 225.7 117 100.0
Dinv21615 Davidia involucrata HOM05D000220 ORTHO05D010891 4.7e-21 104.8 109 57.8
Dinv28567 Davidia involucrata HOM05D008749 ORTHO05D010891 6.0e-16 87.8 113 46.9
Nitab4.5_0006435g0010 Nicotiana tabacum HOM05D008749 ORTHO05D010891 1.0e-15 87.0 62 64.5
HanXRQChr17g0549861 Helianthus annuus HOM05D008749 ORTHO05D010891 1.9e-14 82.8 75 64.0
Zm00001eb000430 Zea mays HOM05D008749 ORTHO05D010891 3.3e-14 82.0 58 70.7
Nn1g01060 Nelumbo nucifera HOM05D008749 ORTHO05D010891 4.3e-14 81.6 111 49.5
Nn6g34013 Nelumbo nucifera HOM05D008749 ORTHO05D010891 5.6e-14 81.3 112 46.4
TAR375G1081 Trochodendron aralioides HOM05D008749 ORTHO05D010891 6.2e-13 77.8 103 47.6
Nn1g01056 Nelumbo nucifera HOM05D008749 ORTHO05D010891 1.4e-12 76.6 79 57.0
Dinv21614 Davidia involucrata HOM05D008749 ORTHO05D010891 6.8e-12 74.3 111 43.2
EL10Ac5g13038 Beta vulgaris HOM05D008749 ORTHO05D010891 1.5e-11 73.2 122 42.6
A01p13770 Brassica napus HOM05D008749 ORTHO05D010891 1.5e-11 73.2 112 48.2
MBI04_g32486_MAGBIO Magnolia biondii HOM05D008749 ORTHO05D010891 2.0e-11 72.8 61 63.9
AT4G22463 Arabidopsis thaliana HOM05D008749 ORTHO05D010891 3.4e-11 72.0 107 47.7
ECA247G1192 Erigeron canadensis HOM05D008749 ORTHO05D010891 4.4e-11 71.6 58 58.6
Actinidia05197 Actinidia chinensis HOM05D008749 ORTHO05D010891 7.5e-11 70.9 70 57.1
Atru.chr9.1350 Acer truncatum HOM05D008749 ORTHO05D010891 1.3e-10 70.1 117 41.9
Actinidia27461 Actinidia chinensis HOM05D008749 ORTHO05D010891 1.7e-10 69.7 100 47.0
Thecc.09G132700 Theobroma cacao HOM05D015384 ORTHO05D012850 2.2e-10 69.3 77 53.2
Nn6g34014 Nelumbo nucifera HOM05D008749 ORTHO05D010891 3.7e-10 68.6 111 40.5
AT1G62515 Arabidopsis thaliana HOM05D008749 ORTHO05D010891 1.1e-09 67.0 61 57.4
Migut.M00127 Erythranthe guttata HOM05D013672 ORTHO05D012850 1.4e-09 66.6 79 45.6
Ah.02g116800 Amaranthus hybridus HOM05D008749 ORTHO05D010891 2.4e-09 65.9 71 50.7
HanXRQChr17g0549911 Helianthus annuus HOM05D008749 ORTHO05D010891 4.1e-09 65.1 105 40.0
DCAR_002361 Daucus carota HOM05D008749 ORTHO05D010891 9.2e-09 63.9 70 50.0
FAN18G0269 Fragaria x ananassa HOM05D008749 ORTHO05D010891 1.2e-08 63.5 70 51.4
ECA238G3377 Erigeron canadensis HOM05D008749 ORTHO05D010891 1.6e-08 63.2 62 51.6
Eucgr.E00449 Eucalyptus grandis HOM05D008749 ORTHO05D010891 2.7e-08 62.4 71 50.7
unitig_0.g1063 Utricularia gibba HOM05D015384 ORTHO05D012850 7.8e-08 60.8 76 46.1
AT4G00163 Arabidopsis thaliana HOM05D008749 ORTHO05D010891 1.3e-07 60.1 63 49.2
MBI04_g32487_MAGBIO Magnolia biondii HOM05D008749 ORTHO05D010891 3.0e-07 58.9 68 50.0
Thecc.09G022700 Theobroma cacao HOM05D008749 ORTHO05D010891 3.0e-07 58.9 58 53.4
FAN15G1908 Fragaria x ananassa HOM05D019040 ORTHO05D010891 6.6e-07 57.8 76 48.7
Cc06_g22410 Coffea canephora HOM05D008749 ORTHO05D010891 8.6e-07 57.4 60 56.7
TAR626G1276 Trochodendron aralioides HOM05D038201 ORTHO05D023277 8.6e-07 57.4 91 42.9
Lsat_1_v5_gn_6_2881 Lactuca sativa HOM05D008749 ORTHO05D010891 1.1e-06 57.0 109 38.5
EL10Ac5g13045 Beta vulgaris HOM05D008749 ORTHO05D010891 1.9e-06 56.2 59 47.5
Sabra18G0107000 Salix brachista HOM05D015384 ORTHO05D012850 1.9e-06 56.2 76 44.7
MBI18_g01544_MAGBIO Magnolia biondii HOM05D013672 ORTHO05D012850 7.3e-06 54.3 59 45.8


User provided reference genes

Program Settings