Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32852 Striga asiatica HOM05D006860 ORTHO05D009547 4.6e-144 514.6 273 100.0
Migut.A00808 Erythranthe guttata HOM05D006860 ORTHO05D009547 7.0e-92 341.3 280 66.4
Oeu026500.1 Olea europaea HOM05D006860 ORTHO05D009547 7.0e-84 314.7 273 61.2
Dinv39106 Davidia involucrata HOM05D006860 ORTHO05D009547 1.4e-76 290.4 276 55.8
RcHm_v2.0_Chr7g0202371 Rosa chinensis HOM05D006860 ORTHO05D009547 9.5e-73 277.7 277 55.6
FAN04G1232 Fragaria x ananassa HOM05D006860 ORTHO05D009547 8.0e-72 274.6 261 56.3
FAN08G1076 Fragaria x ananassa HOM05D006860 ORTHO05D009547 5.2e-71 271.9 262 56.5
Solyc08g079050.2 Solanum lycopersicum HOM05D006860 ORTHO05D009547 5.2e-71 271.9 277 56.0
Sopen08g027510 Solanum pennellii HOM05D006860 ORTHO05D009547 1.5e-70 270.4 277 55.6
FvH4_5g00261 Fragaria vesca HOM05D006860 ORTHO05D009547 2.0e-70 270.0 261 56.3
PGSC0003DMG400004793 Solanum tuberosum HOM05D006860 ORTHO05D009547 2.6e-70 269.6 277 55.6
FAN13G2943 Fragaria x ananassa HOM05D006860 ORTHO05D009547 5.8e-70 268.5 261 56.3
Haze_07857 Corylus avellana HOM05D006860 ORTHO05D009547 1.3e-69 267.3 273 52.4
QL12p013422 Quercus lobata HOM05D006860 ORTHO05D009547 1.4e-68 263.8 274 53.6
Cc08_g12900 Coffea canephora HOM05D006860 ORTHO05D009547 3.5e-67 259.2 283 51.9
Rhsim07G0104800 Rhododendron simsii HOM05D006860 ORTHO05D009547 1.0e-66 257.7 283 53.7
Prupe.5G075300 Prunus persica HOM05D006860 ORTHO05D009547 2.3e-66 256.5 265 54.7
CAN.G1217.16 Capsicum annuum HOM05D006860 ORTHO05D009547 2.5e-65 253.1 262 51.5
MD06G1063700 Malus domestica HOM05D006860 ORTHO05D009547 3.3e-65 252.7 274 54.7
CANSAT21G2349 Cannabis sativa HOM05D006860 ORTHO05D009547 1.1e-63 247.7 274 52.2
Lalb_Chr23g0276231 Lupinus albus HOM05D006860 ORTHO05D009547 6.8e-63 245.0 294 49.7
DCAR_004924 Daucus carota HOM05D006860 ORTHO05D009547 3.4e-62 242.7 262 52.3
Nitab4.5_0012289g0010 Nicotiana tabacum HOM05D006860 ORTHO05D009547 1.3e-61 240.7 237 57.8
Thecc.03G256700 Theobroma cacao HOM05D006860 ORTHO05D009547 2.2e-61 240.0 273 52.4
FAN18G3824 Fragaria x ananassa HOM05D006860 ORTHO05D009547 3.7e-61 239.2 262 52.3
Peaxi162Scf00002g00093 Petunia axillaris HOM05D006860 ORTHO05D009547 4.9e-61 238.8 237 54.4
CiPaw.11G150700 Carya illinoinensis HOM05D006860 ORTHO05D009547 8.3e-61 238.0 223 55.6
unitig_27.g24920 Utricularia gibba HOM05D006860 ORTHO05D009547 2.4e-60 236.5 257 52.5
Glyma.15G182700 Glycine max HOM05D006860 ORTHO05D009547 3.2e-60 236.1 275 52.7
Ca_02280_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 2.1e-59 233.4 277 48.0
Nitab4.5_0000993g0040 Nicotiana tabacum HOM05D006860 ORTHO05D009547 2.7e-59 233.0 219 58.9
Nn6g34033 Nelumbo nucifera HOM05D006860 ORTHO05D009547 4.6e-59 232.3 266 47.7
Duzib084G1019 Durio zibethinus HOM05D006860 ORTHO05D009547 1.9e-57 226.9 270 49.3
TWI15G0511 Tripterygium wilfordii HOM05D006860 ORTHO05D009547 1.9e-57 226.9 280 47.5
arahy.Tifrunner.gnm1.ann1.26U38F Arachis hypogaea HOM05D006860 ORTHO05D009547 4.3e-57 225.7 274 54.4
arahy.Tifrunner.gnm1.ann1.NHN2FI Arachis hypogaea HOM05D006860 ORTHO05D009547 4.3e-57 225.7 274 54.4
Psat1g138880 Pisum sativum HOM05D006860 ORTHO05D009547 5.6e-57 225.3 274 48.2
Manes.01G076800 Manihot esculenta HOM05D006860 ORTHO05D009547 3.6e-56 222.6 282 45.4
Aqoxy7G00725 Aquilegia oxysepala HOM05D006860 ORTHO05D009547 4.7e-56 222.2 264 47.7
EL10Ac5g13012 Beta vulgaris HOM05D006860 ORTHO05D009547 4.7e-56 222.2 272 47.4
Gohir.A03G009800 Gossypium hirsutum HOM05D006860 ORTHO05D009547 1.1e-55 221.1 266 48.1
Gohir.D03G160900 Gossypium hirsutum HOM05D006860 ORTHO05D009547 1.8e-55 220.3 266 48.1
Medtr2g044090 Medicago truncatula HOM05D006860 ORTHO05D009547 1.8e-55 220.3 277 46.2
Gorai.003G169400 Gossypium raimondii HOM05D006860 ORTHO05D009547 3.1e-55 219.5 278 47.1
Phvul.009G223700 Phaseolus vulgaris HOM05D006860 ORTHO05D009547 6.8e-55 218.4 269 49.8
Potri.001G120700 Populus trichocarpa HOM05D006860 ORTHO05D009547 1.2e-54 217.6 279 46.6
TAR375G0404 Trochodendron aralioides HOM05D006860 ORTHO05D009547 1.2e-54 217.6 229 52.0
Sabra01G0093000 Salix brachista HOM05D006860 ORTHO05D009547 2.6e-54 216.5 278 45.7
vmacro14104 Vaccinium macrocarpon HOM05D006860 ORTHO05D009547 5.8e-54 215.3 235 51.1
Eucgr.D02032 Eucalyptus grandis HOM05D006860 ORTHO05D009547 7.5e-54 214.9 279 48.0
ECA233G1099 Erigeron canadensis HOM05D006860 ORTHO05D009547 2.9e-53 213.0 292 48.3
Lj6g0006421 Lotus japonicus HOM05D006860 ORTHO05D009547 2.9e-53 213.0 278 49.6
Atru.chr9.1377 Acer truncatum HOM05D006860 ORTHO05D009547 4.9e-53 212.2 275 48.4
THA.LOC104813362 Tarenaya hassleriana HOM05D006860 ORTHO05D009547 8.3e-53 211.5 280 45.4
VMungo1309G2714 Vigna mungo HOM05D006860 ORTHO05D009547 7.1e-52 208.4 272 46.3
HanXRQChr13g0394991 Helianthus annuus HOM05D006860 ORTHO05D009547 1.6e-51 207.2 264 47.3
Nn4g23121 Nelumbo nucifera HOM05D006860 ORTHO05D009547 1.3e-50 204.1 224 47.8
Thhalv10026873m.g Eutrema salsugineum HOM05D006860 ORTHO05D009547 3.0e-50 203.0 279 45.9
CARHR229490 Cardamine hirsuta HOM05D006860 ORTHO05D009547 5.1e-50 202.2 278 46.4
PSO017G2204 Papaver somniferum HOM05D006860 ORTHO05D009547 5.1e-50 202.2 275 42.5
Aa31LG6G4580 Aethionema arabicum HOM05D006860 ORTHO05D009547 1.1e-49 201.1 290 44.5
C01p16890 Brassica napus HOM05D006860 ORTHO05D009547 1.9e-49 200.3 278 45.0
Sp7g20650 Schrenkiella parvula HOM05D006860 ORTHO05D009547 1.9e-49 200.3 276 46.4
A01p13880 Brassica napus HOM05D006860 ORTHO05D009547 4.3e-49 199.1 278 44.6
BraA01t01334Z Brassica rapa HOM05D006860 ORTHO05D009547 4.3e-49 199.1 278 45.0
AL7G30980 Arabidopsis lyrata HOM05D006860 ORTHO05D009547 5.6e-49 198.7 277 44.8
BolC1t01631H Brassica oleracea HOM05D006860 ORTHO05D009547 7.3e-49 198.4 278 45.0
BcaC09g51131 Brassica carinata HOM05D006860 ORTHO05D009547 1.2e-48 197.6 278 44.6
PSO170G3955 Papaver somniferum HOM05D006860 ORTHO05D009547 1.6e-48 197.2 275 41.8
Actinidia27452 Actinidia chinensis HOM05D006860 ORTHO05D009547 1.1e-47 194.5 194 54.1
AT4G22600 Arabidopsis thaliana HOM05D006860 ORTHO05D009547 1.1e-47 194.5 277 44.4
Carub.0007s1871 Capsella rubella HOM05D006860 ORTHO05D009547 1.4e-47 194.1 277 44.8
Cpa.g.sc29.129 Carica papaya HOM05D006860 ORTHO05D009547 2.4e-47 193.4 269 46.5
TPR.G24674 Trifolium pratense HOM05D006860 ORTHO05D009547 4.4e-46 189.1 251 43.4
Ah.12g056480 Amaranthus hybridus HOM05D006860 ORTHO05D009547 1.4e-44 184.1 247 44.1
PGR031G3062 Punica granatum HOM05D006860 ORTHO05D009547 6.0e-43 178.7 261 43.7
Ciclev10024312m.g Citrus clementina HOM05D006860 ORTHO05D009547 3.1e-39 166.4 279 39.4
Sc07g0009390 Simmondsia chinensis HOM05D000685 ORTHO05D000511 6.0e-35 152.1 233 44.6
HPP92_025603 Vanilla planifolia HOM05D006860 ORTHO05D009547 4.3e-33 146.0 279 37.6
Zm00001eb249700 Zea mays HOM05D006860 ORTHO05D009547 7.6e-30 135.2 271 36.9
HPP92_025643 Vanilla planifolia HOM05D006860 ORTHO05D009547 2.4e-28 130.2 242 39.3
Os02g0661300 Oryza sativa ssp. japonica HOM05D006860 ORTHO05D009547 2.7e-27 126.7 258 35.7
COL.COLO4_37211 Corchorus olitorius HOM05D006860 ORTHO05D009547 6.9e-23 112.1 109 55.0
SGA_v2.0_scaffold16G07543 Striga asiatica HOM05D006860 ORTHO05D009547 6.9e-23 112.1 67 88.1
EL10Ac9g21191 Beta vulgaris HOM05D006860 ORTHO05D009547 5.8e-22 109.0 136 45.6
SGA_v2.0_scaffold15G07181 Striga asiatica HOM05D011902 ORTHO05D009547 1.0e-18 98.2 60 83.3
Ciclev10023898m.g Citrus clementina HOM05D006860 ORTHO05D009547 3.0e-18 96.7 134 45.5
AUR62007478 Chenopodium quinoa HOM05D006860 ORTHO05D009547 2.8e-16 90.1 109 47.7
SGA_v2.0_scaffold191G40457 Striga asiatica HOM05D000592 ORTHO05D001485 2.8e-16 90.1 67 74.6
Sp7g20630 Schrenkiella parvula HOM05D006860 ORTHO05D015488 5.3e-15 85.9 265 30.9
BcaB03g15468 Brassica carinata HOM05D000561 ORTHO05D009547 1.5e-14 84.3 244 29.9
EL10Ac8g19726 Beta vulgaris HOM05D006860 ORTHO05D009547 3.4e-14 83.2 52 69.2
BcaNung01686 Brassica carinata HOM05D006860 ORTHO05D009547 4.5e-14 82.8 264 30.3
Ciclev10010734m.g Citrus clementina HOM05D006860 ORTHO05D009547 4.5e-14 82.8 103 48.5
BcaB03g15470 Brassica carinata HOM05D006860 ORTHO05D009547 5.8e-14 82.4 244 30.3
Carub.0008s2329 Capsella rubella HOM05D006860 ORTHO05D009547 5.8e-14 82.4 267 26.2
BraA03t14423Z Brassica rapa HOM05D006860 ORTHO05D028065 7.1e-12 75.5 271 28.8
A03p53590 Brassica napus HOM05D006860 ORTHO05D015488 2.7e-11 73.6 265 30.2
BcaNung02490 Brassica carinata HOM05D006860 ORTHO05D015488 3.5e-11 73.2 262 29.4
A03p53570 Brassica napus HOM05D006860 ORTHO05D028065 6.1e-11 72.4 271 28.4
BraA03t14425Z Brassica rapa HOM05D006860 ORTHO05D015488 6.1e-11 72.4 264 29.9
C07p51910 Brassica napus HOM05D006860 ORTHO05D028065 1.0e-10 71.6 271 29.2
A03p53560 Brassica napus HOM05D006860 ORTHO05D015488 2.3e-10 70.5 258 28.7
BcaNung01685 Brassica carinata HOM05D006860 ORTHO05D009547 5.1e-10 69.3 264 29.5
C07p51920 Brassica napus HOM05D006860 ORTHO05D015488 8.7e-10 68.6 253 28.9
BolC7t45692H Brassica oleracea HOM05D006860 ORTHO05D015488 8.7e-10 68.6 253 28.9
BraA03t14422Z Brassica rapa HOM05D006860 ORTHO05D015488 1.1e-09 68.2 258 28.3
Ca_27374_v3 Cicer arietinum L. HOM05D006860 ORTHO05D009547 1.1e-09 68.2 70 52.9
SGA_v2.0_scaffold7G03921 Striga asiatica HOM05D002020 ORTHO05D002046 1.9e-09 67.4 51 68.6
C07p51900 Brassica napus HOM05D006860 ORTHO05D015488 2.5e-09 67.0 258 28.3
BolC7t45689H Brassica oleracea HOM05D006860 ORTHO05D015488 2.5e-09 67.0 258 28.3
BcaNung02492 Brassica carinata HOM05D006860 ORTHO05D015488 3.3e-09 66.6 258 27.9
Ca_19832_v3 Cicer arietinum L. HOM05D000030 ORTHO05D000009 3.3e-09 66.6 66 53.0
BcaNung01688 Brassica carinata HOM05D006860 ORTHO05D015488 4.3e-09 66.2 258 26.7
SGA_v2.0_scaffold47G17578 Striga asiatica HOM05D005231 ORTHO05D006387 1.3e-08 64.7 42 83.3
Ciclev10018172m.g Citrus clementina HOM05D006860 ORTHO05D009547 2.2e-08 63.9 66 48.5
BolC7t45690H Brassica oleracea HOM05D006860 ORTHO05D028065 2.4e-07 60.5 258 27.5
TPR.G18947 Trifolium pratense HOM05D006860 ORTHO05D009547 6.9e-07 58.9 73 45.2


User provided reference genes

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