Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 1.3e-94 349.7 174 100.0
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 6.3e-70 267.7 173 79.2
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 9.4e-58 227.3 183 65.0
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 1.4e-56 223.4 181 65.2
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 3.9e-56 221.9 180 65.6
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 6.7e-56 221.1 180 65.6
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 1.1e-55 220.3 175 67.4
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 2.0e-55 219.5 177 63.8
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 3.3e-55 218.8 177 63.3
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 2.6e-52 209.1 172 61.0
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 3.4e-52 208.8 176 60.8
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 7.7e-52 207.6 172 60.5
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 3.8e-51 205.3 172 59.9
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 1.1e-50 203.8 179 59.2
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.9e-50 203.0 177 62.1
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 2.5e-50 202.6 177 62.1
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 9.4e-50 200.7 180 61.1
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 1.0e-48 197.2 176 57.4
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 1.4e-48 196.8 178 59.6
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 1.8e-48 196.4 175 60.6
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 8.8e-48 194.1 176 59.7
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 8.2e-46 187.6 183 56.3
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 8.2e-46 187.6 178 55.6
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 1.4e-45 186.8 184 54.9
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 4.1e-45 185.3 178 57.3
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 7.0e-45 184.5 183 55.7
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 9.1e-45 184.1 175 56.6
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.2e-44 183.7 168 57.1
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 2.0e-44 183.0 183 55.7
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.0e-44 183.0 183 55.7
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 2.6e-44 182.6 178 55.6
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 7.7e-44 181.0 173 54.9
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 7.7e-44 181.0 171 58.5
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 2.9e-43 179.1 181 52.5
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 5.0e-43 178.3 168 57.1
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 6.5e-43 177.9 183 54.6
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 1.5e-42 176.8 186 54.8
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 3.2e-42 175.6 180 53.9
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 3.2e-42 175.6 182 54.9
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 5.5e-42 174.9 179 53.6
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 5.5e-42 174.9 180 53.9
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 9.4e-42 174.1 177 52.5
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 2.1e-41 172.9 169 53.3
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 3.6e-41 172.2 183 50.8
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 4.7e-41 171.8 179 54.2
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 6.1e-41 171.4 179 53.1
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 3.0e-40 169.1 179 52.5
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 8.8e-40 167.5 173 53.8
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 1.2e-39 167.2 175 53.1
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 2.0e-39 166.4 175 51.4
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 3.3e-39 165.6 181 51.4
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 2.2e-38 162.9 179 51.4
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 3.7e-38 162.2 168 54.2
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 6.3e-38 161.4 175 50.3
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 8.2e-38 161.0 164 56.7
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 1.4e-37 160.2 166 55.4
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 1.8e-37 159.8 172 53.5
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 2.4e-37 159.5 182 51.1
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 2.4e-37 159.5 177 50.3
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 9.1e-37 157.5 175 50.3
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 9.1e-37 157.5 181 53.6
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.6e-36 156.8 185 49.2
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 3.5e-36 155.6 169 51.5
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 3.5e-36 155.6 176 49.4
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 4.5e-36 155.2 179 49.7
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 4.5e-36 155.2 183 48.6
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 7.7e-36 154.5 168 50.0
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 7.7e-36 154.5 164 53.0
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.0e-35 154.1 175 48.6
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 1.0e-35 154.1 163 52.8
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 1.3e-35 153.7 182 53.8
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 1.7e-35 153.3 171 53.2
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 2.9e-35 152.5 178 48.3
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 2.9e-35 152.5 176 50.0
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 2.9e-35 152.5 176 48.9
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 3.8e-35 152.1 183 47.5
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 5.0e-35 151.8 171 52.0
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 5.0e-35 151.8 175 48.6
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 5.0e-35 151.8 177 48.0
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 6.5e-35 151.4 177 49.2
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 8.5e-35 151.0 173 49.1
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 1.9e-34 149.8 172 48.3
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.9e-34 149.8 176 50.0
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.9e-34 149.8 176 50.0
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 1.9e-34 149.8 164 53.7
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 3.2e-34 149.1 172 46.5
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 4.2e-34 148.7 173 49.7
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 5.5e-34 148.3 173 48.0
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 5.5e-34 148.3 164 50.6
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 1.6e-33 146.7 172 48.3
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 1.6e-33 146.7 171 49.7
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 2.1e-33 146.4 176 47.7
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 3.6e-33 145.6 177 48.0
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 3.6e-33 145.6 168 48.2
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 6.1e-33 144.8 178 45.5
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 8.0e-33 144.4 168 47.6
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 3.0e-32 142.5 163 49.1
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 4.0e-32 142.1 175 45.1
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 5.2e-32 141.7 165 50.3
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 1.2e-31 140.6 180 47.2
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.5e-31 140.2 114 59.6
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.6e-31 139.4 175 44.0
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 3.4e-31 139.0 178 48.3
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 3.4e-31 139.0 174 44.3
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 3.4e-31 139.0 168 48.2
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 5.7e-31 138.3 169 45.6
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 9.8e-31 137.5 175 44.0
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 1.3e-30 137.1 177 44.6
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 1.7e-30 136.7 175 44.0
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 1.7e-30 136.7 175 44.0
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 1.7e-30 136.7 175 44.6
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 2.2e-30 136.3 154 47.4
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 6.3e-30 134.8 175 44.0
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.8e-29 133.3 175 48.0
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 4.1e-29 132.1 188 44.1
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 5.4e-29 131.7 175 42.9
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 5.4e-29 131.7 176 45.5
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 2.9e-27 125.9 175 42.3
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 2.9e-27 125.9 171 40.9
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 1.2e-25 120.6 175 41.1
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 1.2e-25 120.6 175 41.1
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 1.6e-25 120.2 172 41.9
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 1.6e-25 120.2 172 41.9
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 4.7e-25 118.6 171 41.5
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 6.1e-25 118.2 181 41.4
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 8.0e-25 117.9 176 42.6
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 1.0e-24 117.5 116 50.9
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 2.0e-23 113.2 191 41.9
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 2.3e-19 99.8 114 50.9
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 4.0e-16 89.0 185 29.2
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 2.9e-14 82.8 167 32.9
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 1.4e-13 80.5 166 31.9
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 4.6e-12 75.5 117 40.2


User provided reference genes

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