Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32820 Striga asiatica HOM05D005292 ORTHO05D006473 1.6e-244 849.0 428 100.0
MSTRG.12063 Avicennia marina HOM05D005292 ORTHO05D006473 1.4e-168 596.7 416 74.3
Oeu016513.1 Olea europaea HOM05D005292 ORTHO05D006473 1.5e-157 560.1 427 70.0
Peaxi162Scf00271g00021 Petunia axillaris HOM05D005292 ORTHO05D006473 2.5e-152 542.7 423 66.7
Duzib084G0213 Durio zibethinus HOM05D005292 ORTHO05D006473 5.5e-152 541.6 430 67.2
COL.COLO4_31983 Corchorus olitorius HOM05D005292 ORTHO05D006473 1.2e-151 540.4 429 66.7
Glyma.05G052500 Glycine max HOM05D005292 ORTHO05D006473 1.4e-150 537.0 428 68.0
Thecc.03G261400 Theobroma cacao HOM05D005292 ORTHO05D006473 2.3e-150 536.2 427 66.3
Cpa.g.sc29.95 Carica papaya HOM05D005292 ORTHO05D006473 4.0e-150 535.4 432 66.7
Solyc08g079450.3 Solanum lycopersicum HOM05D005292 ORTHO05D006473 8.8e-150 534.3 423 65.2
Cfa012803 Carpinus fangiana HOM05D005292 ORTHO05D006473 2.0e-149 533.1 390 70.3
Sopen08g027820 Solanum pennellii HOM05D005292 ORTHO05D006473 3.3e-149 532.3 423 65.0
Cc08_g13210 Coffea canephora HOM05D005292 ORTHO05D006473 5.7e-149 531.6 396 69.7
GSVIVG01004916001 Vitis vinifera HOM05D005292 ORTHO05D006473 7.5e-149 531.2 406 68.2
Nn1g01261 Nelumbo nucifera HOM05D005292 ORTHO05D006473 9.7e-149 530.8 398 67.1
CANSAT80G2034 Cannabis sativa HOM05D005292 ORTHO05D006473 2.8e-148 529.3 392 69.4
Nitab4.5_0003534g0020 Nicotiana tabacum HOM05D005292 ORTHO05D006473 2.8e-148 529.3 417 66.7
Glyma.17G134700 Glycine max HOM05D005292 ORTHO05D006473 6.3e-148 528.1 378 73.3
Migut.A00832 Erythranthe guttata HOM05D005292 ORTHO05D006473 8.2e-148 527.7 437 66.8
Ca_12278_v3 Cicer arietinum L. HOM05D005292 ORTHO05D006473 2.4e-147 526.2 427 65.1
CSS0004035 Camellia sinensis var. sinensis HOM05D005292 ORTHO05D006473 5.3e-147 525.0 439 64.5
Gohir.D03G157800 Gossypium hirsutum HOM05D005292 ORTHO05D006473 7.0e-147 524.6 432 64.8
SalBow1G6483 Salvia bowleyana HOM05D005292 ORTHO05D006473 7.0e-147 524.6 405 69.6
Lj4g0005126 Lotus japonicus HOM05D005292 ORTHO05D006473 9.1e-147 524.2 428 65.4
VMungo1215G1740 Vigna mungo HOM05D005292 ORTHO05D006473 9.1e-147 524.2 426 66.9
CAN.G630.87 Capsicum annuum HOM05D005292 ORTHO05D006473 1.2e-146 523.9 424 64.2
CiPaw.11G147800 Carya illinoinensis HOM05D005292 ORTHO05D006473 1.2e-146 523.9 391 69.3
Phvul.003G214500 Phaseolus vulgaris HOM05D005292 ORTHO05D006473 1.2e-146 523.9 433 66.5
Atru.chr9.1428 Acer truncatum HOM05D005292 ORTHO05D006473 2.0e-146 523.1 427 66.5
Gohir.D12G223000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 2.7e-146 522.7 426 65.0
QL12p014915 Quercus lobata HOM05D005292 ORTHO05D006473 1.0e-145 520.8 416 66.6
CiPaw.12G105300 Carya illinoinensis HOM05D005292 ORTHO05D006473 5.0e-145 518.5 375 71.2
Manes.02G033900 Manihot esculenta HOM05D005292 ORTHO05D006473 6.5e-145 518.1 429 65.0
arahy.Tifrunner.gnm1.ann1.VS5X7Y Arachis hypogaea HOM05D005292 ORTHO05D006473 1.1e-144 517.3 428 64.3
Potri.003G114900 Populus trichocarpa HOM05D005292 ORTHO05D006473 1.1e-144 517.3 334 76.9
MD04G1079900 Malus domestica HOM05D005292 ORTHO05D006473 3.2e-144 515.8 431 63.6
Prupe.5G079200 Prunus persica HOM05D005292 ORTHO05D006473 3.2e-144 515.8 435 63.4
PSO782G2032 Papaver somniferum HOM05D005292 ORTHO05D006473 4.2e-144 515.4 338 74.9
arahy.Tifrunner.gnm1.ann1.YRMJ3W Arachis hypogaea HOM05D005292 ORTHO05D006473 5.5e-144 515.0 427 64.2
Ciclev10020454m.g Citrus clementina HOM05D005292 ORTHO05D006473 5.5e-144 515.0 375 70.7
Lj8A255T56 Lonicera japonica HOM05D005292 ORTHO05D006473 5.5e-144 515.0 382 69.4
Potri.001G118000 Populus trichocarpa HOM05D005292 ORTHO05D006473 9.4e-144 514.2 429 66.0
TPR.G37684 Trifolium pratense HOM05D005292 ORTHO05D006473 9.4e-144 514.2 429 64.3
Lalb_Chr05g0225431 Lupinus albus HOM05D005292 ORTHO05D006473 4.7e-143 511.9 431 64.5
Gorai.008G239300 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.4e-142 510.4 451 61.4
HanXRQChr07g0188671 Helianthus annuus HOM05D005292 ORTHO05D006473 1.8e-142 510.0 395 66.8
Gohir.A03G012000 Gossypium hirsutum HOM05D005292 ORTHO05D006473 5.2e-142 508.4 430 63.0
PGR031G2306 Punica granatum HOM05D005292 ORTHO05D006473 5.2e-142 508.4 337 75.1
Psat4g068120 Pisum sativum HOM05D005292 ORTHO05D006473 6.8e-142 508.1 432 64.4
PGSC0003DMG400003959 Solanum tuberosum HOM05D005292 ORTHO05D006473 6.8e-142 508.1 423 63.4
Gorai.007G021400 Gossypium raimondii HOM05D005292 ORTHO05D006473 1.5e-141 506.9 428 64.5
Hma1.2p1_0367F.1_g137040 Hydrangea macrophylla HOM05D005292 ORTHO05D006473 1.5e-141 506.9 404 65.1
Gorai.003G166300 Gossypium raimondii HOM05D005292 ORTHO05D006473 2.6e-141 506.1 428 62.6
EL10Ac5g12610 Beta vulgaris HOM05D005292 ORTHO05D006473 3.4e-141 505.8 388 67.5
Dinv21573 Davidia involucrata HOM05D005292 ORTHO05D006473 4.4e-141 505.4 428 63.6
Nitab4.5_0007591g0040 Nicotiana tabacum HOM05D005292 ORTHO05D006473 7.5e-141 504.6 438 62.3
THA.LOC104813867 Tarenaya hassleriana HOM05D005292 ORTHO05D006473 7.5e-141 504.6 325 75.4
CDE09G1063 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 2.2e-140 503.1 334 73.1
TWI15G0139 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 2.8e-140 502.7 432 62.7
Medtr4g102260 Medicago truncatula HOM05D005292 ORTHO05D006473 3.7e-140 502.3 431 62.9
Sc22g0000600 Simmondsia chinensis HOM05D005292 ORTHO05D006473 4.8e-140 501.9 344 72.4
Gohir.A11G020400 Gossypium hirsutum HOM05D005292 ORTHO05D006473 8.3e-140 501.1 427 63.5
Sed0004099 Sechium edule HOM05D005292 ORTHO05D006473 8.3e-140 501.1 375 69.1
AL6G47090 Arabidopsis lyrata HOM05D005292 ORTHO05D006473 1.8e-139 500.0 318 76.4
Carub.0006s3135 Capsella rubella HOM05D005292 ORTHO05D006473 1.8e-139 500.0 334 74.6
AT4G12230 Arabidopsis thaliana HOM05D005292 ORTHO05D006473 2.4e-139 499.6 328 75.0
FAN04G0899 Fragaria x ananassa HOM05D005292 ORTHO05D006473 2.4e-139 499.6 318 76.7
FAN13G3324 Fragaria x ananassa HOM05D005292 ORTHO05D006473 4.1e-139 498.8 318 76.7
Actinidia02093 Actinidia chinensis HOM05D005292 ORTHO05D006473 7.0e-139 498.0 316 76.9
CARHR254020 Cardamine hirsuta HOM05D005292 ORTHO05D006473 9.1e-139 497.7 323 75.9
Gohir.D11G020100 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.2e-138 497.3 427 63.0
Hund14648 Selenicereus undatus HOM05D005292 ORTHO05D006473 1.2e-138 497.3 352 71.6
MBI12_g31646_MAGBIO Magnolia biondii HOM05D005292 ORTHO05D006473 1.6e-138 496.9 333 75.7
PSO478G4449 Papaver somniferum HOM05D005292 ORTHO05D006473 1.6e-138 496.9 349 71.6
TAR636G1323 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.6e-138 496.9 375 69.1
Sp6g05330 Schrenkiella parvula HOM05D005292 ORTHO05D006473 1.0e-137 494.2 330 73.9
Eucgr.D01991 Eucalyptus grandis HOM05D005292 ORTHO05D006473 1.3e-137 493.8 354 71.8
RcHm_v2.0_Chr7g0201621 Rosa chinensis HOM05D005292 ORTHO05D006473 1.7e-137 493.4 318 76.1
ECA233G3282 Erigeron canadensis HOM05D005292 ORTHO05D006473 2.3e-137 493.0 440 61.4
FAN08G1347 Fragaria x ananassa HOM05D005292 ORTHO05D006473 2.3e-137 493.0 425 61.9
Dinv39082 Davidia involucrata HOM05D005292 ORTHO05D006473 3.8e-137 492.3 431 61.3
Thhalv10028717m.g Eutrema salsugineum HOM05D005292 ORTHO05D006473 3.8e-137 492.3 421 62.2
Gohir.A12G220700 Gossypium hirsutum HOM05D005292 ORTHO05D006473 1.1e-136 490.7 351 71.2
AUR62010507 Chenopodium quinoa HOM05D005292 ORTHO05D006473 1.5e-136 490.3 365 66.8
HanXRQChr02g0046251 Helianthus annuus HOM05D005292 ORTHO05D006473 1.5e-136 490.3 375 67.7
CsaV3_5G003780 Cucumis sativus L. HOM05D005292 ORTHO05D006473 1.9e-136 490.0 410 63.2
FAN18G3339 Fragaria x ananassa HOM05D005292 ORTHO05D006473 3.3e-136 489.2 430 61.4
Aqoxy7G00654 Aquilegia oxysepala HOM05D005292 ORTHO05D006473 4.2e-136 488.8 328 73.5
BcaB01g02654 Brassica carinata HOM05D005292 ORTHO05D006473 4.2e-136 488.8 375 68.3
DCAR_006803 Daucus carota HOM05D005292 ORTHO05D006473 2.8e-135 486.1 335 73.1
Aa31LG9G10310 Aethionema arabicum HOM05D005292 ORTHO05D006473 1.0e-134 484.2 390 65.1
unitig_744.g24320 Utricularia gibba HOM05D005292 ORTHO05D006473 3.4e-133 479.2 400 63.0
vmacro14043 Vaccinium macrocarpon HOM05D005292 ORTHO05D006473 3.4e-133 479.2 415 63.4
A03p29600 Brassica napus HOM05D005292 ORTHO05D006473 7.5e-133 478.0 366 68.0
BcaC01g04601 Brassica carinata HOM05D005292 ORTHO05D006473 1.3e-132 477.2 366 67.8
BraA03t12155Z Brassica rapa HOM05D005292 ORTHO05D006473 1.7e-132 476.9 366 67.8
Ah.02g116220 Amaranthus hybridus HOM05D005292 ORTHO05D006473 2.8e-132 476.1 295 77.3
Ah.12g058260 Amaranthus hybridus HOM05D005292 ORTHO05D006473 3.7e-132 475.7 419 59.9
C03p35880 Brassica napus HOM05D005292 ORTHO05D006473 3.1e-131 472.6 367 67.6
BolC3t15896H Brassica oleracea HOM05D005292 ORTHO05D006473 3.1e-131 472.6 367 67.6
Haze_08610 Corylus avellana HOM05D005292 ORTHO05D006473 4.5e-130 468.8 421 62.0
Os10g0169800 Oryza sativa ssp. japonica HOM05D005292 ORTHO05D006473 7.8e-130 468.0 341 68.3
Lsat_1_v5_gn_6_9841 Lactuca sativa HOM05D005292 ORTHO05D006473 1.9e-128 463.4 326 72.1
Zm00001eb026990 Zea mays HOM05D005292 ORTHO05D006473 3.3e-128 462.6 330 69.4
CDE11G0205 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 1.2e-125 454.1 319 71.2
ClCG01G003660 Citrullus lanatus HOM05D005292 ORTHO05D006473 1.7e-124 450.3 424 58.3
Sabra01G0090700 Salix brachista HOM05D005292 ORTHO05D006473 3.2e-123 446.0 524 51.5
Nn4g26373 Nelumbo nucifera HOM05D005292 ORTHO05D006473 4.1e-123 445.7 408 59.1
ATR0757G031 Amborella trichopoda HOM05D005292 ORTHO05D006473 5.4e-123 445.3 310 72.6
AUR62017394 Chenopodium quinoa HOM05D005292 ORTHO05D006473 2.7e-122 443.0 344 64.8
HPP92_014608 Vanilla planifolia HOM05D005292 ORTHO05D006473 7.0e-115 418.3 410 56.8
TWI15G0397 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 9.2e-115 417.9 411 58.2
Sabra03G0079600 Salix brachista HOM05D005292 ORTHO05D006473 2.5e-112 409.8 220 88.6
Pp3c6_20320 Physcomitrium patens HOM05D005292 ORTHO05D006473 4.9e-108 395.6 307 61.9
SEGI_16146 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 6.4e-108 395.2 333 58.6
Rhsim07G0101700 Rhododendron simsii HOM05D005292 ORTHO05D006473 2.4e-107 393.3 470 50.6
Mapoly0066s0051 Marchantia polymorpha HOM05D005292 ORTHO05D006473 5.1e-105 385.6 317 58.7
SMO223G0031 Selaginella moellendorffii HOM05D005292 ORTHO05D006473 1.4e-102 377.5 298 60.4
AagrBONN_evm.TU.Sc2ySwM_368.248 Anthoceros agrestis HOM05D005292 ORTHO05D006473 2.0e-101 373.6 363 53.2
FvH4_5g00640 Fragaria vesca HOM05D005292 ORTHO05D006473 5.4e-99 365.5 366 57.1
Oeu022319.3 Olea europaea HOM05D005292 ORTHO05D006473 1.2e-98 364.4 439 51.9
Duzib205G1434 Durio zibethinus HOM05D005292 ORTHO05D006473 3.9e-97 359.4 427 51.8
TAR629G1108 Trochodendron aralioides HOM05D005292 ORTHO05D006473 5.6e-96 355.5 183 88.5
Actinidia14462 Actinidia chinensis HOM05D005292 ORTHO05D006473 1.4e-83 314.3 439 45.3
Aa31LG11G5120 Aethionema arabicum HOM05D005292 ORTHO05D006473 3.5e-74 283.1 147 86.4
MD06G1074900 Malus domestica HOM05D005292 ORTHO05D006473 3.3e-72 276.6 147 83.7
Dinv37766 Davidia involucrata HOM05D005292 ORTHO05D006473 2.5e-56 223.8 287 49.5
Lsat_1_v5_gn_8_156781 Lactuca sativa HOM05D005292 ORTHO05D006473 2.0e-48 197.6 174 60.9
Lsat_1_v5_gn_8_88300 Lactuca sativa HOM05D005292 ORTHO05D006473 6.5e-44 182.6 185 51.9
Lsat_1_v5_gn_2_99060 Lactuca sativa HOM05D005292 ORTHO05D006473 1.6e-42 177.9 121 76.0
Lsat_1_v5_gn_8_99640 Lactuca sativa HOM05D005292 ORTHO05D006473 5.3e-38 162.9 160 56.2
SEGI_25328 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.9e-35 154.5 94 68.1
MELO3C005579.2 Cucumis melo HOM05D005292 ORTHO05D006473 1.2e-34 151.8 223 44.4
Cc08_g13200 Coffea canephora HOM05D005292 ORTHO05D006473 3.5e-29 133.7 66 87.9
CDE11G1060 Ceratophyllum demersum HOM05D005292 ORTHO05D006473 2.5e-27 127.5 66 83.3
MD06G1074800 Malus domestica HOM05D005292 ORTHO05D006473 8.0e-26 122.5 74 81.1
SEGI_08273 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 8.8e-25 119.0 113 56.6
TAR636G3691 Trochodendron aralioides HOM05D005292 ORTHO05D006473 1.5e-24 118.2 129 54.3
Glyma.05G052200 Glycine max HOM05D005292 ORTHO05D006473 1.6e-21 108.2 139 48.9
TWI81G0363 Tripterygium wilfordii HOM05D005292 ORTHO05D006473 7.7e-21 105.9 71 74.6
SEGI_15988 Sequoiadendron giganteum HOM05D005292 ORTHO05D006473 1.2e-18 98.6 95 54.7
Eucgr.C02046 Eucalyptus grandis HOM05D005292 ORTHO05D006473 3.0e-17 94.0 66 69.7
vmacro17465 Vaccinium macrocarpon HOM05D002883 ORTHO05D003116 5.7e-16 89.7 66 66.7


User provided reference genes

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