Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold120G32815 Striga asiatica HOM05D004508 ORTHO05D005180 7.2e-89 330.5 159 100.0
SGA_v2.0_scaffold146G36178 Striga asiatica HOM05D004508 ORTHO05D005180 1.0e-26 124.0 77 75.3
SGA_v2.0_scaffold25G11118 Striga asiatica HOM05D004508 ORTHO05D005180 1.0e-26 124.0 77 75.3
MSTRG.12061 Avicennia marina HOM05D004508 ORTHO05D005180 2.8e-24 115.9 77 70.1
Migut.A00834 Erythranthe guttata HOM05D004508 ORTHO05D005180 1.2e-22 110.5 78 66.7
SalBow5G2183 Salvia bowleyana HOM05D004508 ORTHO05D005180 1.7e-21 106.7 77 62.3
SalBow5G3960 Salvia bowleyana HOM05D004508 ORTHO05D005180 1.7e-21 106.7 77 62.3
Dinv37763 Davidia involucrata HOM05D004508 ORTHO05D005180 7.1e-20 101.3 85 56.5
Lj8C255T7 Lonicera japonica HOM05D004508 ORTHO05D005180 7.1e-20 101.3 79 58.2
Cpa.g.sc29.91 Carica papaya HOM05D004508 ORTHO05D005180 2.1e-19 99.8 85 56.5
Duzib205G1463 Durio zibethinus HOM05D004508 ORTHO05D005180 3.5e-19 99.0 85 54.1
PGSC0003DMG400003935 Solanum tuberosum HOM05D004508 ORTHO05D005180 6.0e-19 98.2 76 60.5
AUR62010510 Chenopodium quinoa HOM05D004508 ORTHO05D005180 7.8e-19 97.8 77 55.8
Oeu022318.1 Olea europaea HOM05D004508 ORTHO05D005180 7.8e-19 97.8 77 57.1
Ah.12g058230 Amaranthus hybridus HOM05D004508 ORTHO05D005180 1.0e-18 97.4 95 49.5
Hma1.2p1_0108F.1_g051860 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 1.0e-18 97.4 76 56.6
Prupe.5G079500 Prunus persica HOM05D004508 ORTHO05D005180 1.0e-18 97.4 76 59.2
Gohir.D12G223300 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.3e-18 97.1 95 50.5
Hund14651 Selenicereus undatus HOM05D004508 ORTHO05D005180 1.7e-18 96.7 76 56.6
CSS0027133 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 2.3e-18 96.3 84 51.2
CSS0042805 Camellia sinensis var. sinensis HOM05D004508 ORTHO05D005180 2.3e-18 96.3 84 51.2
Sopen08g027840 Solanum pennellii HOM05D004508 ORTHO05D005180 2.3e-18 96.3 76 60.5
Ciclev10020216m.g Citrus clementina HOM05D004508 ORTHO05D005180 3.0e-18 95.9 78 56.4
Solyc08g079470.3 Solanum lycopersicum HOM05D004508 ORTHO05D005180 3.0e-18 95.9 76 60.5
COL.COLO4_23880 Corchorus olitorius HOM05D004508 ORTHO05D005180 3.9e-18 95.5 94 48.9
EL10Ac5g12616 Beta vulgaris HOM05D004508 ORTHO05D005180 6.6e-18 94.7 77 53.2
Gohir.A12G221000 Gossypium hirsutum HOM05D004508 ORTHO05D005180 8.7e-18 94.4 95 49.5
Gorai.008G239600 Gossypium raimondii HOM05D004508 ORTHO05D005180 8.7e-18 94.4 95 49.5
Potri.001G117700 Populus trichocarpa HOM05D004508 ORTHO05D005180 8.7e-18 94.4 78 56.4
Aa31LG11G5140 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.1e-17 94.0 85 55.3
Aa31LG9G10340 Aethionema arabicum HOM05D004508 ORTHO05D005180 1.1e-17 94.0 85 55.3
CANSAT21G2188 Cannabis sativa HOM05D004508 ORTHO05D005180 1.1e-17 94.0 93 49.5
Nitab4.5_0003534g0110 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.1e-17 94.0 76 57.9
Thecc.03G261800 Theobroma cacao HOM05D004508 ORTHO05D005180 1.1e-17 94.0 93 49.5
TWI81G0341 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 1.1e-17 94.0 93 51.6
AL6G47050 Arabidopsis lyrata HOM05D004508 ORTHO05D005180 1.5e-17 93.6 90 53.3
Cc08_g13230 Coffea canephora HOM05D004508 ORTHO05D005180 1.5e-17 93.6 77 54.5
PGR031G2216 Punica granatum HOM05D004508 ORTHO05D005180 1.5e-17 93.6 77 57.1
Rhsim07G0101600 Rhododendron simsii HOM05D004508 ORTHO05D005180 1.9e-17 93.2 76 53.9
Sc07g0009440 Simmondsia chinensis HOM05D004508 ORTHO05D005180 1.9e-17 93.2 85 51.8
Actinidia27434 Actinidia chinensis HOM05D004508 ORTHO05D005180 2.5e-17 92.8 79 53.2
BcaB01g01727 Brassica carinata HOM05D004508 ORTHO05D005180 2.5e-17 92.8 85 56.5
Nitab4.5_0005465g0020 Nicotiana tabacum HOM05D004508 ORTHO05D005180 2.5e-17 92.8 76 57.9
Hma1.2p1_1654F.1_g295900 Hydrangea macrophylla HOM05D004508 ORTHO05D005180 3.3e-17 92.4 76 55.3
Sp6g05370 Schrenkiella parvula HOM05D004508 ORTHO05D005180 3.3e-17 92.4 94 53.2
Atru.chr9.1431 Acer truncatum HOM05D004508 ORTHO05D005180 7.3e-17 91.3 91 48.4
BcaB01g02657 Brassica carinata HOM05D004508 ORTHO05D005180 7.3e-17 91.3 85 55.3
BcaC04g21205 Brassica carinata HOM05D004508 ORTHO05D005180 7.3e-17 91.3 85 55.3
A09p27030 Brassica napus HOM05D004508 ORTHO05D005180 7.3e-17 91.3 85 55.3
C09p34340 Brassica napus HOM05D004508 ORTHO05D005180 7.3e-17 91.3 85 55.3
BolC9t56277H Brassica oleracea HOM05D004508 ORTHO05D005180 7.3e-17 91.3 85 55.3
BraA09t38274Z Brassica rapa HOM05D004508 ORTHO05D005180 7.3e-17 91.3 85 55.3
CiPaw.11G147500 Carya illinoinensis HOM05D004508 ORTHO05D005180 9.6e-17 90.9 95 46.3
Manes.01G073700 Manihot esculenta HOM05D004508 ORTHO05D005180 9.6e-17 90.9 76 55.3
Peaxi162Scf00271g00023 Petunia axillaris HOM05D004508 ORTHO05D005180 9.6e-17 90.9 85 52.9
QL12p014971 Quercus lobata HOM05D004508 ORTHO05D005180 9.6e-17 90.9 77 51.9
RcHm_v2.0_Chr4g0419741 Rosa chinensis HOM05D004508 ORTHO05D005180 1.3e-16 90.5 96 49.0
BraA03t12150Z Brassica rapa HOM05D004508 ORTHO05D005180 1.6e-16 90.1 94 52.1
Nitab4.5_0007591g0010 Nicotiana tabacum HOM05D004508 ORTHO05D005180 1.6e-16 90.1 76 56.6
RcHm_v2.0_Chr7g0201591 Rosa chinensis HOM05D004508 ORTHO05D005180 1.6e-16 90.1 96 49.0
Sed0020035 Sechium edule HOM05D004508 ORTHO05D005180 1.6e-16 90.1 95 48.4
vmacro14042 Vaccinium macrocarpon HOM05D004508 ORTHO05D005180 1.6e-16 90.1 68 57.4
AT4G12130 Arabidopsis thaliana HOM05D004508 ORTHO05D005180 2.8e-16 89.4 85 52.9
CAN.G630.82 Capsicum annuum HOM05D004508 ORTHO05D005180 2.8e-16 89.4 76 55.3
Eucgr.D01989 Eucalyptus grandis HOM05D004508 ORTHO05D005180 2.8e-16 89.4 94 47.9
TAR374G1167 Trochodendron aralioides HOM05D004508 ORTHO05D005180 2.8e-16 89.4 85 52.9
CARHR254050 Cardamine hirsuta HOM05D004508 ORTHO05D005180 3.6e-16 89.0 85 52.9
FAN08G3098 Fragaria x ananassa HOM05D004508 ORTHO05D005180 3.6e-16 89.0 96 47.9
TWI60G0362 Tripterygium wilfordii HOM05D004508 ORTHO05D005180 3.6e-16 89.0 83 49.4
Nn2g12338 Nelumbo nucifera HOM05D004508 ORTHO05D005180 8.1e-16 87.8 94 47.9
CsaV3_3G003200 Cucumis sativus L. HOM05D004508 ORTHO05D005180 1.1e-15 87.4 86 54.7
Carub.0006s3132 Capsella rubella HOM05D004508 ORTHO05D005180 1.4e-15 87.0 85 51.8
Haze_02980 Corylus avellana HOM05D004508 ORTHO05D005180 1.4e-15 87.0 77 51.9
FvH4_5g00670 Fragaria vesca HOM05D004508 ORTHO05D005180 1.8e-15 86.7 96 46.9
FAN13G3174 Fragaria x ananassa HOM05D004508 ORTHO05D005180 1.8e-15 86.7 96 46.9
FAN18G1402 Fragaria x ananassa HOM05D004508 ORTHO05D005180 1.8e-15 86.7 96 46.9
Gohir.D03G157900 Gossypium hirsutum HOM05D004508 ORTHO05D005180 1.8e-15 86.7 69 56.5
MD04G1079500 Malus domestica HOM05D004508 ORTHO05D005180 1.8e-15 86.7 94 46.8
HPP92_014947 Vanilla planifolia HOM05D004508 ORTHO05D005180 1.8e-15 86.7 77 53.2
HPP92_014982 Vanilla planifolia HOM05D004508 ORTHO05D005180 1.8e-15 86.7 77 53.2
Aa31LG11G5170 Aethionema arabicum HOM05D004508 ORTHO05D005180 2.4e-15 86.3 97 49.5
Thhalv10028714m.g Eutrema salsugineum HOM05D004508 ORTHO05D005180 2.4e-15 86.3 85 51.8
FAN04G0404 Fragaria x ananassa HOM05D004508 ORTHO05D005180 2.4e-15 86.3 77 50.6
Gorai.003G166400 Gossypium raimondii HOM05D004508 ORTHO05D005180 4.0e-15 85.5 69 56.5
ClCG10G003140 Citrullus lanatus HOM05D004508 ORTHO05D005180 5.3e-15 85.1 143 42.0
GSVIVG01004911001 Vitis vinifera HOM05D004508 ORTHO05D005180 5.3e-15 85.1 93 47.3
CDE04G2826 Ceratophyllum demersum HOM05D004508 ORTHO05D005180 9.0e-15 84.3 95 45.3
HanXRQChr17g0549071 Helianthus annuus HOM05D004508 ORTHO05D005180 9.0e-15 84.3 79 53.2
Oeu016511.2 Olea europaea HOM05D004508 ORTHO05D005180 9.0e-15 84.3 55 65.5
Glyma.11G029800 Glycine max HOM05D004508 ORTHO05D005180 1.2e-14 84.0 76 51.3
Medtr3g078637 Medicago truncatula HOM05D004508 ORTHO05D005180 1.2e-14 84.0 77 50.6
BolC3t15891H Brassica oleracea HOM05D004508 ORTHO05D005180 4.4e-14 82.0 69 56.5
Lsat_1_v5_gn_3_3920 Lactuca sativa HOM05D004508 ORTHO05D005180 4.4e-14 82.0 81 49.4
ATR0757G012 Amborella trichopoda HOM05D004508 ORTHO05D005180 5.8e-14 81.6 86 46.5
VMungo1215G0237 Vigna mungo HOM05D004508 ORTHO05D005180 7.6e-14 81.3 75 50.7
Dinv39078 Davidia involucrata HOM05D004508 ORTHO05D005180 9.9e-14 80.9 117 44.4
BcaC01g04604 Brassica carinata HOM05D004508 ORTHO05D005180 1.3e-13 80.5 69 55.1
C03p35810 Brassica napus HOM05D004508 ORTHO05D005180 1.3e-13 80.5 69 55.1
Lsat_1_v5_gn_3_76480 Lactuca sativa HOM05D004508 ORTHO05D005180 2.9e-13 79.3 59 61.0
Phvul.002G060100 Phaseolus vulgaris HOM05D004508 ORTHO05D005180 4.9e-13 78.6 77 46.8
C07p28450 Brassica napus HOM05D004508 ORTHO05D005180 6.4e-13 78.2 66 56.1
Psat5g109880 Pisum sativum HOM05D004508 ORTHO05D005180 6.4e-13 78.2 77 48.1
PSO782G0229 Papaver somniferum HOM05D004508 ORTHO05D005180 8.4e-13 77.8 93 45.2
Eucgr.D02019 Eucalyptus grandis HOM05D004508 ORTHO05D005180 1.1e-12 77.4 93 40.9
unitig_8.g3903 Utricularia gibba HOM05D004508 ORTHO05D005180 1.1e-12 77.4 67 56.7
Ca_16218_v3 Cicer arietinum L. HOM05D004508 ORTHO05D005180 1.4e-12 77.0 77 46.8
Psat1g081320 Pisum sativum HOM05D004508 ORTHO05D005180 1.4e-12 77.0 77 46.8
SEGI_30484 Sequoiadendron giganteum HOM05D004508 ORTHO05D005180 2.4e-12 76.3 94 41.5
ECA234G2416 Erigeron canadensis HOM05D004508 ORTHO05D005180 7.1e-12 74.7 77 44.2
Lj2g0024595 Lotus japonicus HOM05D004508 ORTHO05D005180 1.6e-11 73.6 84 41.7
PSO478G4546 Papaver somniferum HOM05D004508 ORTHO05D005180 1.6e-11 73.6 93 39.8
CBR_g46688 Chara braunii HOM05D004508 ORTHO05D005180 2.7e-11 72.8 86 45.3
Lalb_Chr25g0283101 Lupinus albus HOM05D004508 ORTHO05D005180 4.6e-11 72.0 84 42.9
Os06g0134800 Oryza sativa ssp. japonica HOM05D004508 ORTHO05D005180 4.6e-11 72.0 127 40.2
AagrBONN_evm.TU.Sc2ySwM_344.731 Anthoceros agrestis HOM05D004508 ORTHO05D005180 1.0e-10 70.9 77 45.5
AagrBONN_evm.TU.Sc2ySwM_344.736 Anthoceros agrestis HOM05D004508 ORTHO05D005180 1.0e-10 70.9 77 45.5
AagrBONN_evm.TU.Sc2ySwM_344.739 Anthoceros agrestis HOM05D004508 ORTHO05D005180 1.0e-10 70.9 77 45.5
arahy.Tifrunner.gnm1.ann1.CN31X8 Arachis hypogaea HOM05D004508 ORTHO05D005180 1.0e-10 70.9 77 44.2
arahy.Tifrunner.gnm1.ann1.VMS6QR Arachis hypogaea HOM05D004508 ORTHO05D005180 1.0e-10 70.9 77 44.2
Lj4g0011407 Lotus japonicus HOM05D004508 ORTHO05D005180 1.7e-10 70.1 76 40.8
Zm00001eb377920 Zea mays HOM05D004508 ORTHO05D005180 3.0e-10 69.3 137 36.5
Pp3c2_10920 Physcomitrium patens HOM05D004508 ORTHO05D005180 8.7e-10 67.8 77 36.4
ECA246G1898 Erigeron canadensis HOM05D004508 ORTHO05D005180 2.5e-09 66.2 77 40.3
MBI04_g30221_MAGBIO Magnolia biondii HOM05D004508 ORTHO05D005180 1.6e-08 63.5 47 61.7
Pp3c14_15790 Physcomitrium patens HOM05D004508 ORTHO05D005180 2.1e-08 63.2 77 39.0
Glyma.01G212000 Glycine max HOM05D004508 ORTHO05D005180 2.8e-08 62.8 53 49.1
Duzib084G0179 Durio zibethinus HOM05D004508 ORTHO05D005180 8.1e-08 61.2 76 46.1
SMO165G0061 Selaginella moellendorffii HOM05D004508 ORTHO05D005180 8.1e-08 61.2 94 39.4
Mapoly0014s0047 Marchantia polymorpha HOM05D004508 ORTHO05D005180 3.1e-07 59.3 57 47.4
VMungo1215G2974 Vigna mungo HOM05D004508 ORTHO05D005180 9.0e-07 57.8 48 50.0
Sabra01G0090400 Salix brachista HOM05D004508 ORTHO05D005180 1.5e-06 57.0 45 53.3
A03p29560 Brassica napus HOM05D004508 ORTHO05D005180 7.6e-06 54.7 46 56.5


User provided reference genes

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