Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05919 Striga asiatica HOM05D007760 ORTHO05D008337 1.2e-164 583.2 314 100.0
MSTRG.24243 Avicennia marina HOM05D007760 ORTHO05D008337 6.6e-54 215.3 308 48.1
MSTRG.1190 Avicennia marina HOM05D007760 ORTHO05D008337 2.6e-50 203.4 311 46.6
Migut.C00840 Erythranthe guttata HOM05D007760 ORTHO05D008337 2.6e-50 203.4 307 45.6
Oeu027538.2 Olea europaea HOM05D007760 ORTHO05D008337 3.0e-38 163.3 307 38.8
SalBow8G4233 Salvia bowleyana HOM05D007760 ORTHO05D008337 1.1e-37 161.4 307 42.3
Oeu046271.1 Olea europaea HOM05D007760 ORTHO05D008337 3.7e-36 156.4 288 38.5
Migut.N03163 Erythranthe guttata HOM05D007760 ORTHO05D008337 4.8e-36 156.0 289 41.2
SalBow7G2592 Salvia bowleyana HOM05D007760 ORTHO05D008337 2.0e-34 150.6 297 40.1
CSS0044946 Camellia sinensis var. sinensis HOM05D007760 ORTHO05D008337 1.4e-32 144.4 302 40.4
RhsimUnG0065900 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.5e-29 134.4 292 35.6
RhsimUnG0066000 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.4e-26 123.2 286 35.0
Nitab4.5_0009651g0030 Nicotiana tabacum HOM05D007760 ORTHO05D008337 7.7e-26 122.1 306 33.0
Rhsim06G0021400 Rhododendron simsii HOM05D007760 ORTHO05D008337 3.2e-24 116.7 295 33.6
Peaxi162Scf00438g00084 Petunia axillaris HOM05D021694 ORTHO05D008337 5.5e-24 115.9 304 30.9
Dinv39521 Davidia involucrata HOM05D007760 ORTHO05D008337 1.0e-22 111.7 190 42.6
Sopen04g035090 Solanum pennellii HOM05D021694 ORTHO05D008337 3.0e-22 110.2 295 30.2
Nitab4.5_0000192g0190 Nicotiana tabacum HOM05D021694 ORTHO05D008337 5.1e-22 109.4 302 31.8
Solyc04g081480.3 Solanum lycopersicum HOM05D021694 ORTHO05D008337 5.1e-22 109.4 295 29.8
TAR381G0719 Trochodendron aralioides HOM05D007760 ORTHO05D008337 2.0e-21 107.5 332 32.2
Dinv31848 Davidia involucrata HOM05D007760 ORTHO05D008337 2.6e-21 107.1 322 32.0
Thecc.08G044900 Theobroma cacao HOM05D007760 ORTHO05D008337 1.2e-18 98.2 325 30.5
Rhsim07G0247700 Rhododendron simsii HOM05D007760 ORTHO05D008337 1.5e-18 97.8 185 37.8
Phvul.009G017200 Phaseolus vulgaris HOM05D007760 ORTHO05D008337 3.4e-18 96.7 238 33.2
SGA_v2.0_scaffold47G17496 Striga asiatica HOM05D007760 ORTHO05D008337 1.0e-17 95.1 318 31.4
Actinidia15424 Actinidia chinensis HOM05D007760 ORTHO05D008337 2.9e-17 93.6 300 30.3
Sabra05G0185300 Salix brachista HOM05D007760 ORTHO05D008337 2.9e-17 93.6 317 34.1
TAR625G0557 Trochodendron aralioides HOM05D007760 ORTHO05D008337 3.8e-17 93.2 293 30.7
Potri.005G239800 Populus trichocarpa HOM05D007760 ORTHO05D008337 1.1e-16 91.7 329 34.3
Manes.18G013300 Manihot esculenta HOM05D007760 ORTHO05D008337 1.4e-16 91.3 321 30.8
Duzib041G0564 Durio zibethinus HOM05D007760 ORTHO05D008337 3.2e-16 90.1 322 31.1
vmacro22892 Vaccinium macrocarpon HOM05D007760 ORTHO05D008337 5.5e-16 89.4 300 28.7
QL02p011665 Quercus lobata HOM05D007760 ORTHO05D008337 2.7e-15 87.0 320 27.5
COL.COLO4_26143 Corchorus olitorius HOM05D007760 ORTHO05D008337 1.0e-14 85.1 296 31.1
VMungo1309G0539 Vigna mungo HOM05D007760 ORTHO05D008337 1.8e-14 84.3 232 31.9
Cpa.g.sc26.48 Carica papaya HOM05D007760 ORTHO05D008337 5.2e-14 82.8 181 35.9
Duzib116G0858 Durio zibethinus HOM05D007760 ORTHO05D008337 6.7e-14 82.4 311 30.5
Glyma.04G024000 Glycine max HOM05D007760 ORTHO05D008337 1.1e-13 81.6 249 30.9
Lj1g0003650 Lotus japonicus HOM05D007760 ORTHO05D008337 2.0e-13 80.9 287 28.2
Glyma.06G024200 Glycine max HOM05D007760 ORTHO05D008337 3.3e-13 80.1 299 29.1
Nitab4.5_0025981g0010 Nicotiana tabacum HOM05D007760 ORTHO05D008337 3.3e-13 80.1 161 36.6
SGA_v2.0_scaffold35G14252 Striga asiatica HOM05D007760 ORTHO05D008337 3.3e-13 80.1 158 38.6
Potri.002G021900 Populus trichocarpa HOM05D007760 ORTHO05D008337 4.4e-13 79.7 292 30.5
Sc15g0004960 Simmondsia chinensis HOM05D007760 ORTHO05D008337 7.4e-13 79.0 298 30.2
CiPaw.07G149400 Carya illinoinensis HOM05D007760 ORTHO05D008337 2.2e-12 77.4 169 38.5
Eucgr.F00585 Eucalyptus grandis HOM05D007760 ORTHO05D008337 3.7e-12 76.6 172 37.8
CiPaw.08G066600 Carya illinoinensis HOM05D007760 ORTHO05D008337 8.2e-12 75.5 165 38.8
Lj4P797T23 Lonicera japonica HOM05D007760 ORTHO05D008337 8.2e-12 75.5 193 32.6
Lalb_Chr11g0061901 Lupinus albus HOM05D007760 ORTHO05D008337 8.2e-12 75.5 251 32.3
MBI05_g33714_MAGBIO Magnolia biondii HOM05D007760 ORTHO05D008337 8.2e-12 75.5 295 25.8
Lalb_Chr23g0266151 Lupinus albus HOM05D007760 ORTHO05D008337 1.1e-11 75.1 302 28.1
Medtr1g025290 Medicago truncatula HOM05D007760 ORTHO05D008337 1.4e-11 74.7 306 27.1
MD08G1012900 Malus domestica HOM05D015458 ORTHO05D008337 1.6e-10 71.2 323 27.6
TPR.G20837 Trifolium pratense HOM05D007760 ORTHO05D008337 1.6e-10 71.2 304 28.0
Psat6g002720 Pisum sativum HOM05D007760 ORTHO05D008337 2.6e-10 70.5 212 30.7
TWI36G1437 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 2.6e-10 70.5 168 35.7
Cfa013954 Carpinus fangiana HOM05D007760 ORTHO05D008337 3.5e-10 70.1 297 30.0
arahy.Tifrunner.gnm1.ann1.EU98QJ Arachis hypogaea HOM05D007760 ORTHO05D008337 4.5e-10 69.7 203 33.5
arahy.Tifrunner.gnm1.ann1.WD1IN2 Arachis hypogaea HOM05D007760 ORTHO05D008337 4.5e-10 69.7 203 33.5
Gohir.A06G003700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 5.9e-10 69.3 311 28.9
Haze_22637 Corylus avellana HOM05D007760 ORTHO05D008337 1.0e-09 68.6 206 33.5
Psat6g002760 Pisum sativum HOM05D007760 ORTHO05D008337 1.0e-09 68.6 202 32.2
TPR.G434 Trifolium pratense HOM05D007760 ORTHO05D008337 1.3e-09 68.2 182 28.6
Gorai.010G003900 Gossypium raimondii HOM05D007760 ORTHO05D008337 1.7e-09 67.8 311 29.3
Gorai.010G004100 Gossypium raimondii HOM05D007760 ORTHO05D008337 2.2e-09 67.4 312 29.2
Gohir.D06G006600 Gossypium hirsutum HOM05D007760 ORTHO05D008337 2.9e-09 67.0 311 28.9
RcHm_v2.0_Chr6g0302891 Rosa chinensis HOM05D015458 ORTHO05D008337 2.9e-09 67.0 178 33.7
ClCG08G014270 Citrullus lanatus HOM05D016278 ORTHO05D008337 1.1e-08 65.1 165 32.7
Cc10_g01650 Coffea canephora HOM05D007760 ORTHO05D008337 1.1e-08 65.1 337 25.5
FAN20G0648 Fragaria x ananassa HOM05D015458 ORTHO05D008337 1.1e-08 65.1 176 34.1
Lalb_Chr24g0398711 Lupinus albus HOM05D007760 ORTHO05D008337 1.5e-08 64.7 191 33.5
PSO700G0198 Papaver somniferum HOM05D063576 ORTHO05D008337 1.9e-08 64.3 251 25.9
TWI56G0173 Tripterygium wilfordii HOM05D007760 ORTHO05D008337 2.5e-08 63.9 184 32.1
Psat6g002840 Pisum sativum HOM05D007760 ORTHO05D008337 3.2e-08 63.5 208 30.3
FAN27G2463 Fragaria x ananassa HOM05D015458 ORTHO05D008337 7.2e-08 62.4 176 33.5
Gohir.A06G003900 Gossypium hirsutum HOM05D007760 ORTHO05D008337 7.2e-08 62.4 310 28.1
Gorai.010G004000 Gossypium raimondii HOM05D007760 ORTHO05D008337 9.4e-08 62.0 300 28.0
Manes.05G147200 Manihot esculenta HOM05D007760 ORTHO05D008337 9.4e-08 62.0 293 28.0
Psat6g002560 Pisum sativum HOM05D007760 ORTHO05D008337 9.4e-08 62.0 179 34.1
FvH4_2g38410 Fragaria vesca HOM05D015458 ORTHO05D008337 1.2e-07 61.6 171 31.0
Psat6g002640 Pisum sativum HOM05D007760 ORTHO05D008337 1.6e-07 61.2 80 45.0
Ciclev10001832m.g Citrus clementina HOM05D007760 ORTHO05D008337 2.1e-07 60.8 165 33.3
Lalb_Chr14g0369911 Lupinus albus HOM05D007760 ORTHO05D008337 2.1e-07 60.8 175 32.0
FAN15G2338 Fragaria x ananassa HOM05D015458 ORTHO05D008337 2.7e-07 60.5 178 32.0
Medtr1g025310 Medicago truncatula HOM05D007760 ORTHO05D008337 2.7e-07 60.5 184 30.4
PSO170G4597 Papaver somniferum HOM05D063576 ORTHO05D008337 3.6e-07 60.1 311 25.7
CAN.G311.33 Capsicum annuum HOM05D021694 ORTHO05D008337 6.1e-07 59.3 179 32.4
Gohir.D06G006700 Gossypium hirsutum HOM05D007760 ORTHO05D008337 8.0e-07 58.9 310 27.1
Atru.chr13.288 Acer truncatum HOM05D007760 ORTHO05D008337 1.0e-06 58.5 329 31.9
CsaV3_2G029560 Cucumis sativus L. HOM05D016278 ORTHO05D008337 1.4e-06 58.2 315 28.9
MELO3C011015.2 Cucumis melo HOM05D016278 ORTHO05D008337 1.8e-06 57.8 165 32.1
Duzib093G0245 Durio zibethinus HOM05D007760 ORTHO05D008337 1.8e-06 57.8 196 27.6
Hund05187 Selenicereus undatus HOM05D030748 ORTHO05D008337 1.8e-06 57.8 203 29.6
SGA_v2.0_scaffold390G50602 Striga asiatica HOM05D007760 ORTHO05D008337 1.8e-06 57.8 107 41.1
Gohir.A06G003800 Gossypium hirsutum HOM05D007760 ORTHO05D008337 3.0e-06 57.0 187 29.9
GSVIVG01009912001 Vitis vinifera HOM05D007760 ORTHO05D008337 3.0e-06 57.0 132 34.8
Nn5g29094 Nelumbo nucifera HOM05D007760 ORTHO05D008337 5.2e-06 56.2 178 29.2
Prupe.1G364900 Prunus persica HOM05D015458 ORTHO05D008337 8.8e-06 55.5 188 30.9


User provided reference genes

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