Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05895 Striga asiatica HOM05D004951 ORTHO05D005840 1.6e-124 449.5 235 100.0
MSTRG.1208 Avicennia marina HOM05D004951 ORTHO05D005840 2.9e-86 322.4 235 71.9
SalBow8G2430 Salvia bowleyana HOM05D004951 ORTHO05D005840 9.6e-82 307.4 235 69.8
Oeu024529.1 Olea europaea HOM05D004951 ORTHO05D005840 2.1e-81 306.2 235 67.7
Migut.G00984 Erythranthe guttata HOM05D004951 ORTHO05D005840 2.7e-76 289.3 199 70.9
Migut.C00815 Erythranthe guttata HOM05D004951 ORTHO05D005840 3.5e-76 288.9 195 72.3
Oeu056857.1 Olea europaea HOM05D004951 ORTHO05D005840 6.0e-76 288.1 192 74.0
Actinidia37925 Actinidia chinensis HOM05D004951 ORTHO05D005840 2.5e-69 266.2 230 60.4
Actinidia15407 Actinidia chinensis HOM05D004951 ORTHO05D005840 3.2e-69 265.8 227 62.1
Cc10_g01890 Coffea canephora HOM05D004951 ORTHO05D005840 3.2e-69 265.8 235 57.4
CSS0031211 Camellia sinensis var. sinensis HOM05D004951 ORTHO05D005840 1.8e-67 260.0 228 60.5
vmacro14381 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 3.3e-66 255.8 201 62.7
Dinv39502 Davidia involucrata HOM05D004951 ORTHO05D005840 4.3e-66 255.4 231 58.4
vmacro21713 Vaccinium macrocarpon HOM05D004951 ORTHO05D005840 7.4e-66 254.6 201 63.2
Hma1.2p1_0638F.1_g193670 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 2.2e-65 253.1 237 58.2
QL02p011069 Quercus lobata HOM05D004951 ORTHO05D005840 6.3e-65 251.5 230 57.4
Atru.chr2.1521 Acer truncatum HOM05D004951 ORTHO05D005840 1.1e-64 250.8 230 59.1
Solyc05g054140.3 Solanum lycopersicum HOM05D004951 ORTHO05D005840 2.4e-64 249.6 230 58.7
Sopen05g032630 Solanum pennellii HOM05D004951 ORTHO05D005840 5.3e-64 248.4 235 57.9
PGSC0003DMG400008458 Solanum tuberosum HOM05D004951 ORTHO05D005840 6.9e-64 248.1 236 59.3
Nitab4.5_0001242g0070 Nicotiana tabacum HOM05D004951 ORTHO05D005840 2.0e-63 246.5 230 57.0
TAR381G0914 Trochodendron aralioides HOM05D004951 ORTHO05D005840 4.5e-63 245.4 230 57.4
GSVIVG01009867001 Vitis vinifera HOM05D004951 ORTHO05D005840 7.7e-63 244.6 230 58.3
Lalb_Chr03g0040521 Lupinus albus HOM05D004951 ORTHO05D005840 2.2e-62 243.0 234 56.0
THA.LOC104809415 Tarenaya hassleriana HOM05D004951 ORTHO05D005840 2.2e-62 243.0 228 54.8
CAN.G103.3 Capsicum annuum HOM05D004951 ORTHO05D005840 6.5e-62 241.5 235 56.2
Ciclev10002352m.g Citrus clementina HOM05D004951 ORTHO05D005840 1.4e-61 240.4 230 57.4
COL.COLO4_20267 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.4e-61 240.4 202 59.4
COL.COLO4_26170 Corchorus olitorius HOM05D004951 ORTHO05D005840 1.4e-61 240.4 230 55.7
Rhsim06G0023300 Rhododendron simsii HOM05D004951 ORTHO05D005840 1.4e-61 240.4 230 55.2
Lsat_1_v5_gn_8_80440 Lactuca sativa HOM05D004951 ORTHO05D005840 1.9e-61 240.0 223 54.7
Ca_08030_v3 Cicer arietinum L. HOM05D004951 ORTHO05D005840 2.5e-61 239.6 230 54.3
Glyma.18G246500 Glycine max HOM05D004951 ORTHO05D005840 4.2e-61 238.8 232 54.7
Cpa.g.sc26.26 Carica papaya HOM05D004951 ORTHO05D005840 1.2e-60 237.3 230 54.3
PSO541G0679 Papaver somniferum HOM05D004951 ORTHO05D005840 2.1e-60 236.5 194 60.3
Manes.05G149800 Manihot esculenta HOM05D004951 ORTHO05D005840 3.6e-60 235.7 230 57.8
Nitab4.5_0014171g0010 Nicotiana tabacum HOM05D004951 ORTHO05D005840 3.6e-60 235.7 259 51.4
Peaxi162Scf00186g00023 Petunia axillaris HOM05D004951 ORTHO05D005840 3.6e-60 235.7 256 52.0
Psat6g222440 Pisum sativum HOM05D004951 ORTHO05D005840 1.8e-59 233.4 230 51.7
PGR031G1064 Punica granatum HOM05D004951 ORTHO05D005840 1.8e-59 233.4 195 60.0
Cfa013928 Carpinus fangiana HOM05D004951 ORTHO05D005840 2.3e-59 233.0 230 55.7
TWI34G1799 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 2.3e-59 233.0 230 55.7
Nn5g29279 Nelumbo nucifera HOM05D004951 ORTHO05D005840 3.0e-59 232.6 230 52.6
Potri.005G236800 Populus trichocarpa HOM05D004951 ORTHO05D005840 3.0e-59 232.6 230 55.2
Carub.0002s2250 Capsella rubella HOM05D004951 ORTHO05D005840 5.1e-59 231.9 194 57.2
CARHR069060 Cardamine hirsuta HOM05D004951 ORTHO05D005840 6.7e-59 231.5 194 56.7
AL2G35650 Arabidopsis lyrata HOM05D004951 ORTHO05D005840 1.1e-58 230.7 194 56.2
TWI56G1488 Tripterygium wilfordii HOM05D004951 ORTHO05D005840 1.1e-58 230.7 229 55.0
PSO675G8856 Papaver somniferum HOM05D004951 ORTHO05D005840 2.0e-58 229.9 237 52.7
Glyma.09G246500 Glycine max HOM05D004951 ORTHO05D005840 2.5e-58 229.6 232 53.9
Aa31LG4G5890 Aethionema arabicum HOM05D004951 ORTHO05D005840 3.3e-58 229.2 207 55.6
Duzib116G0591 Durio zibethinus HOM05D004951 ORTHO05D005840 4.3e-58 228.8 235 53.2
Lj1g0015493 Lotus japonicus HOM05D004951 ORTHO05D005840 5.7e-58 228.4 235 51.1
unitig_8.g4914 Utricularia gibba HOM05D004951 ORTHO05D005840 5.7e-58 228.4 195 57.9
AT1G75670 Arabidopsis thaliana HOM05D004951 ORTHO05D005840 9.7e-58 227.6 194 55.2
Thhalv10019169m.g Eutrema salsugineum HOM05D004951 ORTHO05D005840 9.7e-58 227.6 194 57.2
CiPaw.08G064600 Carya illinoinensis HOM05D004951 ORTHO05D005840 1.3e-57 227.3 230 53.0
Gohir.A09G014000 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.3e-57 227.3 230 53.0
Gohir.D02G097900 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.3e-57 227.3 230 53.0
Sabra05G0183100 Salix brachista HOM05D004951 ORTHO05D005840 1.3e-57 227.3 230 53.9
Gorai.005G111600 Gossypium raimondii HOM05D004951 ORTHO05D005840 1.7e-57 226.9 230 53.0
MD10G1149500 Malus domestica HOM05D004951 ORTHO05D005840 1.7e-57 226.9 232 52.6
PSO675G7262 Papaver somniferum HOM05D004951 ORTHO05D005840 1.7e-57 226.9 228 54.8
Eucgr.E00855 Eucalyptus grandis HOM05D004951 ORTHO05D005840 2.8e-57 226.1 230 53.9
HanXRQChr10g0300951 Helianthus annuus HOM05D004951 ORTHO05D005840 3.7e-57 225.7 182 60.4
Sp5g30770 Schrenkiella parvula HOM05D004951 ORTHO05D005840 3.7e-57 225.7 196 56.1
VMungo1383G3289 Vigna mungo HOM05D004951 ORTHO05D005840 6.3e-57 224.9 232 53.0
Gohir.A07G207200 Gossypium hirsutum HOM05D004951 ORTHO05D005840 1.1e-56 224.2 230 52.2
Phvul.008G050600 Phaseolus vulgaris HOM05D004951 ORTHO05D005840 1.1e-56 224.2 232 53.9
Actinidia28598 Actinidia chinensis HOM05D004951 ORTHO05D005840 1.4e-56 223.8 232 53.9
HanXRQChr02g0039471 Helianthus annuus HOM05D004951 ORTHO05D005840 2.4e-56 223.0 235 51.9
ClCG11G002570 Citrullus lanatus HOM05D004951 ORTHO05D005840 3.1e-56 222.6 233 49.4
PGR031G3408 Punica granatum HOM05D004951 ORTHO05D005840 6.9e-56 221.5 187 59.4
Potri.002G024601 Populus trichocarpa HOM05D004951 ORTHO05D005840 1.5e-55 220.3 231 54.1
Thecc.08G041400 Theobroma cacao HOM05D004951 ORTHO05D005840 1.5e-55 220.3 230 51.7
ECA236G4786 Erigeron canadensis HOM05D004951 ORTHO05D005840 2.0e-55 219.9 226 52.7
Gohir.A07G207300 Gossypium hirsutum HOM05D004951 ORTHO05D005840 2.0e-55 219.9 197 54.8
CsaV3_3G045700 Cucumis sativus L. HOM05D004951 ORTHO05D005840 4.5e-55 218.8 233 50.6
ClCG05G018480 Citrullus lanatus HOM05D004951 ORTHO05D005840 5.9e-55 218.4 180 56.1
arahy.Tifrunner.gnm1.ann1.1I2LZG Arachis hypogaea HOM05D004951 ORTHO05D005840 1.0e-54 217.6 231 52.8
arahy.Tifrunner.gnm1.ann1.5C4441 Arachis hypogaea HOM05D004951 ORTHO05D005840 1.0e-54 217.6 232 52.2
MD05G1155200 Malus domestica HOM05D004951 ORTHO05D005840 1.3e-54 217.2 230 51.3
arahy.Tifrunner.gnm1.ann1.T7R5G6 Arachis hypogaea HOM05D004951 ORTHO05D005840 3.8e-54 215.7 231 51.9
BcaC03g15607 Brassica carinata HOM05D004951 ORTHO05D005840 3.8e-54 215.7 194 52.6
BolC2t09323H Brassica oleracea HOM05D004951 ORTHO05D005840 3.8e-54 215.7 194 52.6
TPR.G15148 Trifolium pratense HOM05D004951 ORTHO05D005840 6.5e-54 214.9 230 50.9
C02p33810 Brassica napus HOM05D004951 ORTHO05D005840 1.9e-53 213.4 182 53.8
BraA02t07047Z Brassica rapa HOM05D004951 ORTHO05D005840 1.9e-53 213.4 194 52.1
CANSAT78G0251 Cannabis sativa HOM05D004951 ORTHO05D005840 2.5e-53 213.0 236 50.0
A02p20120 Brassica napus HOM05D004951 ORTHO05D005840 3.2e-53 212.6 182 53.8
Sc02g0008460 Simmondsia chinensis HOM05D004951 ORTHO05D005840 3.2e-53 212.6 233 52.4
Dinv31828 Davidia involucrata HOM05D004951 ORTHO05D005840 6.1e-52 208.4 193 57.0
Eucgr.F02088 Eucalyptus grandis HOM05D004951 ORTHO05D005840 6.1e-52 208.4 235 50.6
BcaC08g47055 Brassica carinata HOM05D004951 ORTHO05D005840 1.8e-51 206.8 182 53.8
Sed0001853 Sechium edule HOM05D004951 ORTHO05D005840 1.8e-51 206.8 231 47.6
EL10Ac1g02264 Beta vulgaris HOM05D004951 ORTHO05D005840 1.1e-50 204.1 231 50.2
Prupe.8G188100 Prunus persica HOM05D004951 ORTHO05D005840 4.4e-50 202.2 231 49.8
Atru.chr13.322 Acer truncatum HOM05D004951 ORTHO05D005840 5.7e-50 201.8 200 56.0
Oeu024522.1 Olea europaea HOM05D004951 ORTHO05D005840 5.7e-50 201.8 233 52.4
CDE12G0586 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 7.4e-50 201.4 180 55.0
Ah.02g126690 Amaranthus hybridus HOM05D004951 ORTHO05D005840 2.2e-49 199.9 198 51.5
Aqoxy3G00621 Aquilegia oxysepala HOM05D004951 ORTHO05D005840 4.8e-49 198.7 248 47.2
Medtr7g080860 Medicago truncatula HOM05D004951 ORTHO05D005840 4.8e-49 198.7 233 47.2
AUR62035728 Chenopodium quinoa HOM05D004951 ORTHO05D005840 6.3e-49 198.4 176 56.8
HPP92_017328 Vanilla planifolia HOM05D004951 ORTHO05D005840 2.4e-48 196.4 202 50.0
CDE05G3598 Ceratophyllum demersum HOM05D004951 ORTHO05D005840 3.1e-48 196.1 180 53.3
TAR625G0428 Trochodendron aralioides HOM05D004951 ORTHO05D005840 1.6e-47 193.7 193 52.8
DCAR_008455 Daucus carota HOM05D004951 ORTHO05D005840 1.0e-46 191.0 152 59.2
AUR62035440 Chenopodium quinoa HOM05D004951 ORTHO05D005840 1.7e-46 190.3 213 48.8
Haze_22610 Corylus avellana HOM05D004951 ORTHO05D005840 3.8e-46 189.1 249 47.8
RcHm_v2.0_Chr6g0282531 Rosa chinensis HOM05D004951 ORTHO05D005840 1.6e-44 183.7 242 44.6
FAN15G3167 Fragaria x ananassa HOM05D004951 ORTHO05D005840 2.7e-44 183.0 180 51.7
Sed0010580 Sechium edule HOM05D004951 ORTHO05D005840 3.6e-44 182.6 233 44.2
FAN24G1417 Fragaria x ananassa HOM05D004951 ORTHO05D005840 1.4e-43 180.6 243 44.4
FvH4_2g17590 Fragaria vesca HOM05D004951 ORTHO05D005840 3.0e-43 179.5 243 44.9
FAN15G2157 Fragaria x ananassa HOM05D004951 ORTHO05D005840 3.0e-43 179.5 243 44.9
Nn1g08637 Nelumbo nucifera HOM05D004951 ORTHO05D005840 3.0e-43 179.5 230 44.3
Lj4A795G31 Lonicera japonica HOM05D004951 ORTHO05D005840 6.7e-43 178.3 124 70.2
Lalb_Chr01g0021631 Lupinus albus HOM05D004951 ORTHO05D005840 7.5e-42 174.9 231 45.5
BcaB05g24929 Brassica carinata HOM05D000120 ORTHO05D000068 2.2e-41 173.3 157 52.9
FAN27G0910 Fragaria x ananassa HOM05D004951 ORTHO05D005840 4.8e-41 172.2 261 42.5
Gohir.A02G093500 Gossypium hirsutum HOM05D004951 ORTHO05D005840 4.5e-39 165.6 142 54.9
Os12g0533600 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 5.9e-39 165.2 233 41.6
CAN.G230.10 Capsicum annuum HOM05D004951 ORTHO05D005840 2.2e-38 163.3 131 61.1
MBI05_g38365_MAGBIO Magnolia biondii HOM05D004951 ORTHO05D005840 6.5e-38 161.8 231 41.6
SEGI_29847 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 1.0e-35 154.5 243 39.1
ATR0068G029 Amborella trichopoda HOM05D004951 ORTHO05D005840 5.2e-35 152.1 234 41.9
Os06g0168400 Oryza sativa ssp. japonica HOM05D004951 ORTHO05D005840 1.2e-34 151.0 154 48.7
Mapoly0115s0026 Marchantia polymorpha HOM05D004951 ORTHO05D005840 7.5e-34 148.3 223 39.5
Zm00001eb410680 Zea mays HOM05D004951 ORTHO05D005840 1.7e-33 147.1 255 38.0
Pp3c15_23380 Physcomitrium patens HOM05D004951 ORTHO05D005840 2.9e-30 136.3 236 37.3
AagrBONN_evm.TU.Sc2ySwM_368.3390 Anthoceros agrestis HOM05D004951 ORTHO05D005840 5.0e-30 135.6 184 41.8
AagrBONN_evm.TU.Sc2ySwM_344.4244 Anthoceros agrestis HOM05D004951 ORTHO05D005840 3.2e-29 132.9 183 41.0
PGSC0003DMG400019052 Solanum tuberosum HOM05D004951 ORTHO05D005840 2.6e-26 123.2 115 54.8
SMO356G0424 Selaginella moellendorffii HOM05D004951 ORTHO05D005840 1.3e-25 120.9 210 36.2
Hma1.2p1_2299F.1_g319190 Hydrangea macrophylla HOM05D004951 ORTHO05D005840 5.2e-19 99.0 76 64.5
Sed0021847 Sechium edule HOM05D004951 ORTHO05D005840 3.4e-18 96.3 143 36.4
SEGI_15858 Sequoiadendron giganteum HOM05D004951 ORTHO05D005840 1.3e-17 94.4 99 48.5
SGA_v2.0_scaffold7G04028 Striga asiatica HOM05D002238 ORTHO05D001984 6.4e-17 92.0 73 75.3
ATR0585G020 Amborella trichopoda HOM05D004951 ORTHO05D005840 5.4e-16 89.0 88 47.7
BolC6t40000H Brassica oleracea HOM05D004951 ORTHO05D005840 1.0e-11 74.7 58 55.2
Cre02.g086750 Chlamydomonas reinhardtii HOM05D004951 ORTHO05D005840 2.0e-10 70.5 180 27.8


User provided reference genes

Program Settings