Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05811 Striga asiatica HOM05D006161 ORTHO05D007483 3.6e-109 398.3 206 100.0
SGA_v2.0_scaffold14G07119 Striga asiatica HOM05D006161 ORTHO05D007483 7.5e-46 188.0 114 91.2
Migut.B00613 Erythranthe guttata HOM05D006161 ORTHO05D007483 2.7e-40 169.5 119 78.2
MSTRG.20298 Avicennia marina HOM05D006161 ORTHO05D007483 7.5e-38 161.4 112 79.5
Rhsim05G0107700 Rhododendron simsii HOM05D006161 ORTHO05D007483 8.3e-37 157.9 119 73.9
Oeu047362.1 Olea europaea HOM05D006161 ORTHO05D007483 3.1e-36 156.0 119 73.9
vmacro19927 Vaccinium macrocarpon HOM05D006161 ORTHO05D007483 3.1e-36 156.0 119 72.3
Peaxi162Scf00001g00019 Petunia axillaris HOM05D006161 ORTHO05D007483 9.1e-36 154.5 159 59.7
Dinv09035 Davidia involucrata HOM05D006161 ORTHO05D007483 1.2e-35 154.1 118 72.9
Manes.14G166201 Manihot esculenta HOM05D006161 ORTHO05D007483 1.2e-35 154.1 114 75.4
SalBow6G1080 Salvia bowleyana HOM05D006161 ORTHO05D007483 3.5e-35 152.5 114 72.8
SalBow6G1732 Salvia bowleyana HOM05D006161 ORTHO05D007483 3.5e-35 152.5 114 72.8
SGA_v2.0_scaffold40G15604 Striga asiatica HOM05D008540 ORTHO05D009454 1.0e-34 151.0 86 82.6
PGSC0003DMG400012586 Solanum tuberosum HOM05D006161 ORTHO05D007483 1.3e-34 150.6 116 71.6
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 2.3e-34 149.8 119 73.1
GSVIVG01003100001 Vitis vinifera HOM05D006161 ORTHO05D007483 2.3e-34 149.8 150 60.0
QL11p020678 Quercus lobata HOM05D006161 ORTHO05D007483 2.9e-34 149.4 114 71.1
CAN.G523.74 Capsicum annuum HOM05D006161 ORTHO05D007483 6.5e-34 148.3 150 58.7
Nitab4.5_0003858g0050 Nicotiana tabacum HOM05D006161 ORTHO05D007483 6.5e-34 148.3 116 70.7
Lsat_1_v5_gn_5_107281 Lactuca sativa HOM05D006161 ORTHO05D007483 8.6e-34 147.9 112 73.2
Nitab4.5_0002576g0040 Nicotiana tabacum HOM05D006161 ORTHO05D007483 8.6e-34 147.9 116 70.7
MSTRG.16580 Avicennia marina HOM05D006161 ORTHO05D007483 1.1e-33 147.5 114 71.9
Sopen01g047660 Solanum pennellii HOM05D006161 ORTHO05D007483 1.1e-33 147.5 116 69.8
Ciclev10029442m.g Citrus clementina HOM05D006161 ORTHO05D007483 1.5e-33 147.1 122 70.5
CSS0044873 Camellia sinensis var. sinensis HOM05D006161 ORTHO05D007483 1.9e-33 146.7 107 75.7
Eucgr.I02667 Eucalyptus grandis HOM05D006161 ORTHO05D007483 3.3e-33 146.0 150 58.0
Haze_10694 Corylus avellana HOM05D006161 ORTHO05D007483 4.2e-33 145.6 110 71.8
Medtr4g094242 Medicago truncatula HOM05D006161 ORTHO05D007483 5.5e-33 145.2 148 56.8
Sabra05G0140100 Salix brachista HOM05D006161 ORTHO05D007483 5.5e-33 145.2 102 76.5
Atru.chr12.1730 Acer truncatum HOM05D006161 ORTHO05D007483 7.2e-33 144.8 119 66.4
Potri.012G022200 Populus trichocarpa HOM05D006161 ORTHO05D007483 7.2e-33 144.8 119 68.9
Prupe.8G061800 Prunus persica HOM05D006161 ORTHO05D007483 7.2e-33 144.8 115 68.7
Sc18g0006920 Simmondsia chinensis HOM05D006161 ORTHO05D007483 7.2e-33 144.8 151 57.6
PGR142G0837 Punica granatum HOM05D006161 ORTHO05D007483 9.5e-33 144.4 149 57.0
Psat7g098400 Pisum sativum HOM05D006161 ORTHO05D007483 2.1e-32 143.3 149 55.7
RcHm_v2.0_Chr3g0485521 Rosa chinensis HOM05D006161 ORTHO05D007483 3.6e-32 142.5 150 57.3
CsaV3_7G006450 Cucumis sativus L. HOM05D006161 ORTHO05D007483 4.7e-32 142.1 148 55.4
MD05G1163200 Malus domestica HOM05D006161 ORTHO05D007483 6.1e-32 141.7 115 67.0
Hund06386 Selenicereus undatus HOM05D006161 ORTHO05D007483 8.0e-32 141.4 150 57.3
Solyc01g105130.4 Solanum lycopersicum HOM05D006161 ORTHO05D007483 8.0e-32 141.4 117 65.8
MELO3C018647.2 Cucumis melo HOM05D006161 ORTHO05D007483 1.0e-31 141.0 148 55.4
MD10G1152800 Malus domestica HOM05D006161 ORTHO05D007483 1.0e-31 141.0 115 66.1
ECA234G1571 Erigeron canadensis HOM05D006161 ORTHO05D007483 1.4e-31 140.6 112 67.9
FvH4_1g26050 Fragaria vesca HOM05D006161 ORTHO05D007483 1.4e-31 140.6 148 57.4
FAN26G2610 Fragaria x ananassa HOM05D006161 ORTHO05D007483 1.4e-31 140.6 148 57.4
arahy.Tifrunner.gnm1.ann1.6D7HHK Arachis hypogaea HOM05D006161 ORTHO05D007483 1.8e-31 140.2 148 56.1
arahy.Tifrunner.gnm1.ann1.75PVJ4 Arachis hypogaea HOM05D006161 ORTHO05D007483 1.8e-31 140.2 148 56.1
Cfa005604 Carpinus fangiana HOM05D006161 ORTHO05D007483 2.3e-31 139.8 108 70.4
DCAR_001788 Daucus carota HOM05D006161 ORTHO05D007483 2.3e-31 139.8 131 59.5
EL10Ac9g21470 Beta vulgaris HOM05D006161 ORTHO05D007483 3.0e-31 139.4 150 56.0
AUR62013116 Chenopodium quinoa HOM05D006161 ORTHO05D007483 3.0e-31 139.4 150 56.7
FAN28G0148 Fragaria x ananassa HOM05D006161 ORTHO05D007483 3.0e-31 139.4 148 56.8
THA.LOC104799966 Tarenaya hassleriana HOM05D006161 ORTHO05D007483 4.0e-31 139.0 114 67.5
Aqoxy3G03670 Aquilegia oxysepala HOM05D006161 ORTHO05D007483 6.8e-31 138.3 115 65.2
Sed0024565 Sechium edule HOM05D006161 ORTHO05D007483 6.8e-31 138.3 150 54.7
FAN19G1889 Fragaria x ananassa HOM05D006161 ORTHO05D007483 8.9e-31 137.9 115 66.1
FAN23G0154 Fragaria x ananassa HOM05D006161 ORTHO05D007483 8.9e-31 137.9 148 56.1
FAN23G2587 Fragaria x ananassa HOM05D006161 ORTHO05D007483 8.9e-31 137.9 148 56.1
HanXRQChr10g0295861 Helianthus annuus HOM05D006161 ORTHO05D007483 1.2e-30 137.5 112 68.8
CANSAT11G1086 Cannabis sativa HOM05D006161 ORTHO05D007483 1.5e-30 137.1 147 55.8
TWI14G1433 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 1.5e-30 137.1 119 66.4
PSO017G6730 Papaver somniferum HOM05D006161 ORTHO05D007483 2.0e-30 136.7 145 56.6
PSO478G0074 Papaver somniferum HOM05D006161 ORTHO05D007483 2.0e-30 136.7 145 56.6
MD00G1096800 Malus domestica HOM05D006161 ORTHO05D007483 2.6e-30 136.3 115 65.2
MD05G1163000 Malus domestica HOM05D006161 ORTHO05D007483 2.6e-30 136.3 115 65.2
BolC9t53879H Brassica oleracea HOM05D006161 ORTHO05D007483 3.4e-30 136.0 114 64.0
Aa31LG1G17750 Aethionema arabicum HOM05D006161 ORTHO05D007483 4.4e-30 135.6 102 68.6
BcaB02g09779 Brassica carinata HOM05D006161 ORTHO05D007483 4.4e-30 135.6 114 64.9
C03p62070 Brassica napus HOM05D006161 ORTHO05D007483 4.4e-30 135.6 114 64.0
BolC3t18468H Brassica oleracea HOM05D006161 ORTHO05D007483 4.4e-30 135.6 114 64.9
Carub.0008s2497 Capsella rubella HOM05D006161 ORTHO05D007483 4.4e-30 135.6 114 64.0
Sabra15G0004000 Salix brachista HOM05D006161 ORTHO05D007483 5.7e-30 135.2 172 53.5
AL8G41450 Arabidopsis lyrata HOM05D006161 ORTHO05D007483 7.5e-30 134.8 114 64.0
C09p09680 Brassica napus HOM05D006161 ORTHO05D007483 9.8e-30 134.4 114 63.2
Thhalv10005060m.g Eutrema salsugineum HOM05D006161 ORTHO05D007483 9.8e-30 134.4 114 64.0
Hma1.2p1_0704F.1_g206700 Hydrangea macrophylla HOM05D006161 ORTHO05D007483 9.8e-30 134.4 110 67.3
VMungo0251G3203 Vigna mungo HOM05D006161 ORTHO05D007483 9.8e-30 134.4 112 62.5
Sp2g27240 Schrenkiella parvula HOM05D006161 ORTHO05D007483 1.3e-29 134.0 114 64.0
BraA09t36505Z Brassica rapa HOM05D006161 ORTHO05D007483 2.2e-29 133.3 114 63.2
AT5G64180 Arabidopsis thaliana HOM05D006161 ORTHO05D007483 2.8e-29 132.9 102 66.7
A09p08560 Brassica napus HOM05D006161 ORTHO05D007483 2.8e-29 132.9 114 63.2
BraA06t26029Z Brassica rapa HOM05D006161 ORTHO05D007483 3.7e-29 132.5 114 63.2
Lj5P240T24 Lonicera japonica HOM05D006161 ORTHO05D007483 3.7e-29 132.5 130 63.1
Lalb_Chr10g0097811 Lupinus albus HOM05D006161 ORTHO05D007483 3.7e-29 132.5 108 63.9
Glyma.05G117900 Glycine max HOM05D006161 ORTHO05D007483 4.9e-29 132.1 117 60.7
HPP92_024935 Vanilla planifolia HOM05D006161 ORTHO05D007483 4.9e-29 132.1 113 66.4
Os12g0502100 Oryza sativa ssp. japonica HOM05D006161 ORTHO05D007483 8.3e-29 131.3 101 67.3
CARHR278090 Cardamine hirsuta HOM05D006161 ORTHO05D007483 1.1e-28 131.0 114 62.3
CiPaw.05G036100 Carya illinoinensis HOM05D006161 ORTHO05D007483 2.4e-28 129.8 96 72.9
Zm00001eb409430 Zea mays HOM05D006161 ORTHO05D007483 2.4e-28 129.8 102 64.7
Nn4g23459 Nelumbo nucifera HOM05D006161 ORTHO05D007483 3.1e-28 129.4 97 73.2
TAR622G1105 Trochodendron aralioides HOM05D006161 ORTHO05D007483 4.1e-28 129.0 114 62.3
CDE04G2984 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 5.4e-28 128.6 131 53.4
SGA_v2.0_scaffold18G08255 Striga asiatica HOM05D008540 ORTHO05D009454 5.4e-28 128.6 86 67.4
Zm00001eb138120 Zea mays HOM05D006161 ORTHO05D007483 7.0e-28 128.3 107 62.6
BcaC01g02675 Brassica carinata HOM05D006161 ORTHO05D007483 9.2e-28 127.9 114 62.3
Phvul.002G208400 Phaseolus vulgaris HOM05D006161 ORTHO05D007483 9.2e-28 127.9 112 59.8
Actinidia00265 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.2e-27 127.5 101 71.3
ClCG09G015360 Citrullus lanatus HOM05D006161 ORTHO05D007483 1.2e-27 127.5 101 67.3
Glyma.08G072800 Glycine max HOM05D006161 ORTHO05D007483 1.2e-27 127.5 118 58.5
ATR0177G010 Amborella trichopoda HOM05D006161 ORTHO05D007483 2.7e-27 126.3 145 53.8
unitig_8.g3487 Utricularia gibba HOM05D006161 ORTHO05D007483 4.5e-27 125.6 157 51.0
Cpa.g.sc42.64 Carica papaya HOM05D006161 ORTHO05D007483 5.9e-27 125.2 89 75.3
SHI16526 Sapria himalayana HOM05D006161 ORTHO05D007483 1.0e-26 124.4 107 62.6
TWI14G1282 Tripterygium wilfordii HOM05D006161 ORTHO05D007483 3.8e-26 122.5 113 61.9
ECA236G0554 Erigeron canadensis HOM05D006161 ORTHO05D007483 5.0e-26 122.1 101 68.3
Gohir.A12G014900 Gossypium hirsutum HOM05D006161 ORTHO05D007483 5.0e-26 122.1 95 70.5
Ca_18349_v3 Cicer arietinum L. HOM05D006161 ORTHO05D007483 8.6e-26 121.3 95 66.3
Cc02_g21600 Coffea canephora HOM05D006161 ORTHO05D007483 1.1e-25 120.9 119 62.2
SGA_v2.0_scaffold41G15831 Striga asiatica HOM05D000007 ORTHO05D000039 7.3e-25 118.2 86 65.1
Duzib132G0386 Durio zibethinus HOM05D006161 ORTHO05D007483 8.0e-24 114.8 90 68.9
Potri.015G005600 Populus trichocarpa HOM05D006161 ORTHO05D007483 5.2e-23 112.1 98 65.3
Mapoly0094s0011 Marchantia polymorpha HOM05D006161 ORTHO05D007483 1.2e-22 110.9 114 54.4
Lj4g0015467 Lotus japonicus HOM05D006161 ORTHO05D007483 2.6e-22 109.8 150 47.3
Thecc.02G139200 Theobroma cacao HOM05D006161 ORTHO05D007483 3.4e-22 109.4 87 71.3
Gohir.D12G015300 Gossypium hirsutum HOM05D006161 ORTHO05D007483 2.9e-21 106.3 83 68.7
Gorai.008G015400 Gossypium raimondii HOM05D006161 ORTHO05D007483 2.9e-21 106.3 83 68.7
A06p30900 Brassica napus HOM05D006161 ORTHO05D007483 6.4e-21 105.1 114 52.6
SGA_v2.0_scaffold50G18613 Striga asiatica HOM05D008540 ORTHO05D009454 5.4e-20 102.1 69 66.7
CDE04G3544 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 9.2e-20 101.3 133 45.9
AagrBONN_evm.TU.Sc2ySwM_117.171 Anthoceros agrestis HOM05D006161 ORTHO05D007483 1.0e-18 97.8 102 48.0
COL.COLO4_13985 Corchorus olitorius HOM05D006161 ORTHO05D007483 5.6e-17 92.0 66 71.2
Lj6g0024224 Lotus japonicus HOM05D006161 ORTHO05D007483 7.3e-17 91.7 150 43.3
SMO116G0092 Selaginella moellendorffii HOM05D006161 ORTHO05D007483 7.3e-17 91.7 102 47.1
SGA_v2.0_scaffold102G29842 Striga asiatica HOM05D008540 ORTHO05D009454 3.2e-12 76.3 68 48.5
SGA_v2.0_scaffold143G35711 Striga asiatica HOM05D008540 ORTHO05D009454 2.0e-11 73.6 70 47.1
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 6.0e-11 72.0 65 49.2
SGA_v2.0_scaffold44G16794 Striga asiatica HOM05D008540 ORTHO05D009454 1.0e-10 71.2 70 45.7
SGA_v2.0_scaffold9G04915 Striga asiatica HOM05D008540 ORTHO05D009454 1.0e-10 71.2 70 45.7
Actinidia23993 Actinidia chinensis HOM05D006161 ORTHO05D007483 1.3e-10 70.9 46 76.1
CDE07G1624 Ceratophyllum demersum HOM05D006161 ORTHO05D007483 1.7e-10 70.5 94 47.9
SGA_v2.0_scaffold136G35018 Striga asiatica HOM05D008540 ORTHO05D009454 1.1e-09 67.8 84 38.1
SGA_v2.0_scaffold279G46775 Striga asiatica HOM05D008540 ORTHO05D009454 1.1e-09 67.8 84 38.1
SalBow1G1176 Salvia bowleyana HOM05D007970 ORTHO05D009943 1.5e-09 67.4 44 77.3
SGA_v2.0_scaffold223G42818 Striga asiatica HOM05D008540 ORTHO05D009454 1.5e-09 67.4 84 38.1
SalBow8G2067 Salvia bowleyana HOM05D012005 ORTHO05D009454 1.9e-09 67.0 78 46.2
SGA_v2.0_scaffold158G37503 Striga asiatica HOM05D008540 ORTHO05D009454 3.3e-09 66.2 84 38.1
SGA_v2.0_scaffold344G49484 Striga asiatica HOM05D008540 ORTHO05D009454 4.3e-09 65.9 85 38.8
SGA_v2.0_scaffold74G24718 Striga asiatica HOM05D012578 ORTHO05D009454 7.3e-09 65.1 87 37.9
SGA_v2.0_scaffold39G15240 Striga asiatica HOM05D008540 ORTHO05D009454 9.5e-09 64.7 86 38.4
SalBow1G6296 Salvia bowleyana HOM05D001508 ORTHO05D001381 1.2e-08 64.3 66 51.5
SGA_v2.0_scaffold230G43375 Striga asiatica HOM05D012578 ORTHO05D009454 1.6e-08 63.9 79 39.2
SGA_v2.0_scaffold56G19924 Striga asiatica HOM05D008540 ORTHO05D009454 1.6e-08 63.9 85 37.6
SGA_v2.0_scaffold104G30112 Striga asiatica HOM05D012578 ORTHO05D009454 2.1e-08 63.5 65 44.6
TPR.G10469 Trifolium pratense HOM05D006161 ORTHO05D007483 2.8e-08 63.2 51 52.9
SGA_v2.0_scaffold26G11231 Striga asiatica HOM05D012578 ORTHO05D009454 3.6e-08 62.8 79 38.0
SGA_v2.0_scaffold148G36475 Striga asiatica HOM05D008540 ORTHO05D009454 6.2e-08 62.0 119 35.3
SGA_v2.0_scaffold99G29480 Striga asiatica HOM05D015694 ORTHO05D009454 6.2e-08 62.0 74 41.9
SGA_v2.0_scaffold35G14227 Striga asiatica HOM05D008540 ORTHO05D009454 8.1e-08 61.6 86 39.5
SGA_v2.0_scaffold16G07574 Striga asiatica HOM05D015694 ORTHO05D009454 1.1e-07 61.2 74 41.9
SGA_v2.0_scaffold347G49542 Striga asiatica HOM05D008540 ORTHO05D009454 1.1e-07 61.2 119 34.5
SGA_v2.0_scaffold3G01511 Striga asiatica HOM05D008540 ORTHO05D009454 1.1e-07 61.2 86 39.5
SGA_v2.0_scaffold5G02820 Striga asiatica HOM05D012578 ORTHO05D009454 1.4e-07 60.8 65 41.5
SGA_v2.0_scaffold85G26668 Striga asiatica HOM05D008540 ORTHO05D009454 1.4e-07 60.8 58 48.3
SGA_v2.0_scaffold33G13401 Striga asiatica HOM05D008540 ORTHO05D009454 1.8e-07 60.5 71 40.8
SalBow6G4158 Salvia bowleyana HOM05D012005 ORTHO05D009454 4.0e-07 59.3 66 43.9
SGA_v2.0_scaffold74G24555 Striga asiatica HOM05D008540 ORTHO05D009454 4.0e-07 59.3 71 35.2
SGA_v2.0_scaffold234G43637 Striga asiatica HOM05D012578 ORTHO05D009454 8.9e-07 58.2 79 34.2
SGA_v2.0_scaffold8G04365 Striga asiatica HOM05D008540 ORTHO05D009454 8.9e-07 58.2 84 34.5
SalBow3G3497 Salvia bowleyana HOM05D012005 ORTHO05D009454 1.2e-06 57.8 66 43.9
SGA_v2.0_scaffold43G16300 Striga asiatica HOM05D008540 ORTHO05D009454 1.2e-06 57.8 77 37.7
SGA_v2.0_scaffold67G22715 Striga asiatica HOM05D012578 ORTHO05D009454 1.2e-06 57.8 79 34.2
SGA_v2.0_scaffold189G40365 Striga asiatica HOM05D008540 ORTHO05D009454 1.5e-06 57.4 69 40.6
SGA_v2.0_scaffold96G29032 Striga asiatica HOM05D015694 ORTHO05D009454 1.5e-06 57.4 56 50.0
arahy.Tifrunner.gnm1.ann1.A44469 Arachis hypogaea HOM05D006161 ORTHO05D007483 2.0e-06 57.0 49 63.3
Rhsim11G0188900 Rhododendron simsii HOM05D059487 ORTHO05D004107 2.0e-06 57.0 87 34.5
SGA_v2.0_scaffold9G04899 Striga asiatica HOM05D008540 ORTHO05D009454 2.0e-06 57.0 110 34.5
SGA_v2.0_scaffold317G48444 Striga asiatica HOM05D008540 ORTHO05D009454 2.6e-06 56.6 77 37.7
SGA_v2.0_scaffold65G22136 Striga asiatica HOM05D008540 ORTHO05D009454 2.6e-06 56.6 71 40.8
SalBow4G2475 Salvia bowleyana HOM05D012439 ORTHO05D009454 3.4e-06 56.2 70 38.6
SalBow5G0855 Salvia bowleyana HOM05D012005 ORTHO05D009454 3.4e-06 56.2 64 43.8
SalBow5G3871 Salvia bowleyana HOM05D012005 ORTHO05D009454 3.4e-06 56.2 66 42.4
SGA_v2.0_scaffold84G26477 Striga asiatica HOM05D008540 ORTHO05D009454 3.4e-06 56.2 77 39.0
Rhsim07G0242400 Rhododendron simsii HOM05D000070 ORTHO05D003315 5.8e-06 55.5 88 30.7
Rhsim07G0243000 Rhododendron simsii HOM05D000070 ORTHO05D003315 5.8e-06 55.5 88 30.7


User provided reference genes

Program Settings