Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 2.2e-117 425.6 212 100.0
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 2.6e-41 172.9 255 45.9
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 3.1e-39 166.0 87 88.5
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 5.3e-39 165.2 248 46.0
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 1.6e-38 163.7 136 64.7
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 2.6e-38 162.9 214 46.7
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 2.6e-38 162.9 178 52.2
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 3.5e-38 162.5 214 46.7
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 3.5e-38 162.5 136 62.5
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 4.5e-38 162.2 136 62.5
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 4.5e-38 162.2 136 64.0
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 5.9e-38 161.8 256 43.0
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 1.0e-37 161.0 252 44.4
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 1.0e-37 161.0 136 62.5
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.3e-37 160.6 135 60.7
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.3e-37 160.6 255 43.9
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 1.3e-37 160.6 136 64.0
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 1.3e-37 160.6 253 41.5
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 2.2e-37 159.8 252 44.8
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 2.2e-37 159.8 136 60.3
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 2.9e-37 159.5 135 61.5
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 2.9e-37 159.5 252 42.9
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 3.8e-37 159.1 136 61.0
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 5.0e-37 158.7 136 61.0
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 5.0e-37 158.7 136 61.0
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 5.0e-37 158.7 135 60.7
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 6.5e-37 158.3 136 61.0
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 6.5e-37 158.3 136 60.3
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 6.5e-37 158.3 216 44.9
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 1.1e-36 157.5 136 60.3
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 1.5e-36 157.1 146 56.8
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.9e-36 156.8 136 59.6
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 2.5e-36 156.4 249 42.6
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 2.5e-36 156.4 253 41.5
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 3.2e-36 156.0 135 60.7
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 3.2e-36 156.0 252 43.7
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 3.2e-36 156.0 135 60.7
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 3.2e-36 156.0 136 60.3
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 4.2e-36 155.6 136 61.0
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 4.2e-36 155.6 262 41.2
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 4.2e-36 155.6 252 42.1
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 7.2e-36 154.8 252 40.9
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 7.2e-36 154.8 136 60.3
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 9.4e-36 154.5 135 58.5
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 9.4e-36 154.5 235 46.0
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 1.2e-35 154.1 134 59.0
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 1.2e-35 154.1 252 42.1
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 1.6e-35 153.7 253 42.3
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 1.6e-35 153.7 136 58.8
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.1e-35 153.3 136 58.1
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 2.7e-35 152.9 136 58.1
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 6.1e-35 151.8 136 58.8
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 6.1e-35 151.8 136 58.8
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 1.0e-34 151.0 252 40.5
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 1.0e-34 151.0 136 57.4
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 1.4e-34 150.6 136 58.1
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 1.4e-34 150.6 131 61.8
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 1.4e-34 150.6 136 58.8
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 1.4e-34 150.6 252 41.3
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 1.8e-34 150.2 130 61.5
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 1.8e-34 150.2 252 40.5
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 4.0e-34 149.1 136 57.4
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 4.0e-34 149.1 211 44.5
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 5.2e-34 148.7 135 57.0
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 6.7e-34 148.3 252 40.1
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 6.7e-34 148.3 135 56.3
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 8.8e-34 147.9 136 56.6
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 8.8e-34 147.9 213 46.0
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 1.1e-33 147.5 136 56.6
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 1.1e-33 147.5 127 61.4
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.5e-33 147.1 199 45.7
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 2.0e-33 146.7 220 43.6
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 2.0e-33 146.7 135 55.6
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 3.3e-33 146.0 256 42.6
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 3.3e-33 146.0 213 46.0
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 5.7e-33 145.2 136 55.1
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 5.7e-33 145.2 136 55.1
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 5.7e-33 145.2 136 55.1
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 5.7e-33 145.2 136 56.6
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 9.7e-33 144.4 135 57.0
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 9.7e-33 144.4 136 55.1
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 9.7e-33 144.4 136 55.1
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 9.7e-33 144.4 247 41.3
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 3.7e-32 142.5 244 42.6
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 1.8e-31 140.2 127 59.8
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 1.8e-31 140.2 159 47.2
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 1.8e-31 140.2 242 41.3
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 2.4e-31 139.8 166 49.4
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 5.3e-31 138.7 70 95.7
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 7.0e-31 138.3 127 57.5
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 5.9e-30 135.2 134 53.0
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 5.9e-30 135.2 70 92.9
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 7.7e-30 134.8 128 54.7
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 1.0e-29 134.4 191 46.6
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.3e-29 134.0 74 90.5
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 1.3e-29 134.0 73 84.9
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 3.8e-29 132.5 129 51.9
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 5.0e-29 132.1 152 46.7
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 6.5e-29 131.7 164 48.2
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 3.2e-28 129.4 124 56.5
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 5.5e-28 128.6 134 49.3
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 7.2e-28 128.3 70 85.7
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 6.8e-26 121.7 89 73.0
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 2.6e-25 119.8 130 47.7
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 3.0e-18 96.3 69 63.8
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 4.4e-17 92.4 70 61.4
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 7.0e-15 85.1 98 45.9
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 2.0e-14 83.6 98 55.1
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 2.0e-14 83.6 90 50.0
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 3.5e-14 82.8 70 61.4


User provided reference genes

Program Settings