Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05775 Striga asiatica HOM05D007685 ORTHO05D009136 9.0e-161 570.1 267 100.0
SGA_v2.0_scaffold138G35171 Striga asiatica HOM05D007685 ORTHO05D009136 4.5e-128 461.5 387 62.5
SGA_v2.0_scaffold138G35173 Striga asiatica HOM05D007685 ORTHO05D009136 7.5e-123 444.1 224 93.3
SGA_v2.0_scaffold11G05774 Striga asiatica HOM05D007685 ORTHO05D009136 7.5e-99 364.4 393 51.9
SGA_v2.0_scaffold300G47760 Striga asiatica HOM05D007685 ORTHO05D009136 3.0e-47 193.0 112 80.4
Migut.K01121 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.2e-41 172.6 239 43.5
Migut.K01116 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.5e-41 172.2 240 43.3
SGA_v2.0_scaffold135G34948 Striga asiatica HOM05D007685 ORTHO05D009136 9.4e-41 171.4 274 39.1
Migut.K00645 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.6e-40 170.6 241 43.2
Migut.K00780 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-39 167.5 249 42.2
SGA_v2.0_scaffold135G34942 Striga asiatica HOM05D007685 ORTHO05D009136 6.7e-39 165.2 262 38.9
SGA_v2.0_scaffold228G43240 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-38 163.3 262 38.2
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 9.7e-38 161.4 242 41.3
Migut.J00230 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.4e-36 157.5 230 41.3
Migut.H00978 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.1e-36 156.0 235 43.8
SGA_v2.0_scaffold461G51963 Striga asiatica HOM05D007685 ORTHO05D009136 4.1e-36 156.0 260 37.3
Migut.H02253 Erythranthe guttata HOM05D007685 ORTHO05D009136 5.9e-35 152.1 240 41.7
SGA_v2.0_scaffold70G23610 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-34 151.0 264 36.7
Migut.H00447 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.7e-34 150.6 239 38.5
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 7.2e-33 145.2 232 38.8
Migut.H00267 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.1e-32 143.7 256 37.5
SGA_v2.0_scaffold1514G53974 Striga asiatica HOM05D007685 ORTHO05D009136 2.7e-32 143.3 239 36.8
SGA_v2.0_scaffold9G04671 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-32 142.9 241 37.3
SGA_v2.0_scaffold405G51033 Striga asiatica HOM05D007685 ORTHO05D009136 6.1e-32 142.1 239 36.8
SGA_v2.0_scaffold405G51038 Striga asiatica HOM05D007685 ORTHO05D009136 6.1e-32 142.1 239 36.8
SGA_v2.0_scaffold9G05054 Striga asiatica HOM05D007685 ORTHO05D009136 6.1e-32 142.1 267 37.1
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 1.8e-31 140.6 231 36.4
Migut.H01396 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.0e-31 139.8 239 40.6
SGA_v2.0_scaffold481G52326 Striga asiatica HOM05D007685 ORTHO05D009136 3.9e-31 139.4 236 38.6
SGA_v2.0_scaffold359G49862 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-29 134.4 236 36.4
SGA_v2.0_scaffold135G34957 Striga asiatica HOM05D007685 ORTHO05D009136 4.8e-29 132.5 166 42.8
SGA_v2.0_scaffold9G05056 Striga asiatica HOM05D007685 ORTHO05D009136 2.4e-28 130.2 267 35.2
SGA_v2.0_scaffold205G41698 Striga asiatica HOM05D007685 ORTHO05D009136 1.2e-27 127.9 218 39.4
Migut.K00648 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.6e-27 127.5 273 32.2
SGA_v2.0_scaffold98G29349 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-27 126.7 253 38.7
SGA_v2.0_scaffold98G29350 Striga asiatica HOM05D007685 ORTHO05D009136 3.8e-26 122.9 226 39.4
SGA_v2.0_scaffold18G08226 Striga asiatica HOM05D007685 ORTHO05D009136 8.5e-26 121.7 154 44.2
SGA_v2.0_scaffold211G42108 Striga asiatica HOM05D007685 ORTHO05D009136 1.5e-25 120.9 185 39.5
SGA_v2.0_scaffold36G14300 Striga asiatica HOM05D007685 ORTHO05D009136 2.5e-25 120.2 216 38.4
SGA_v2.0_scaffold125G33660 Striga asiatica HOM05D007685 ORTHO05D009136 5.5e-25 119.0 225 37.8
SGA_v2.0_scaffold205G41700 Striga asiatica HOM05D007685 ORTHO05D009136 1.6e-24 117.5 228 37.7
Migut.D00968 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.1e-24 117.1 251 37.1
SGA_v2.0_scaffold106G30572 Striga asiatica HOM05D000403 ORTHO05D009136 2.1e-24 117.1 220 36.8
SGA_v2.0_scaffold240G44161 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-24 116.3 234 38.9
SGA_v2.0_scaffold66G22258 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-24 116.3 239 36.8
CAN.G760.4 Capsicum annuum HOM05D007685 ORTHO05D009136 4.7e-24 115.9 213 34.7
SGA_v2.0_scaffold70G23609 Striga asiatica HOM05D007685 ORTHO05D009136 6.1e-24 115.5 239 36.4
SGA_v2.0_scaffold135G34952 Striga asiatica HOM05D007685 ORTHO05D009136 8.0e-24 115.2 224 37.5
SGA_v2.0_scaffold227G43147 Striga asiatica HOM05D007685 ORTHO05D009136 1.0e-23 114.8 239 35.6
SGA_v2.0_scaffold205G41702 Striga asiatica HOM05D007685 ORTHO05D009136 6.7e-23 112.1 163 42.9
Migut.C00362 Erythranthe guttata HOM05D007685 ORTHO05D009136 8.8e-23 111.7 240 31.2
SGA_v2.0_scaffold66G22255 Striga asiatica HOM05D007685 ORTHO05D009136 2.0e-22 110.5 239 36.4
SGA_v2.0_scaffold52G19053 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-22 110.2 231 36.4
SGA_v2.0_scaffold66G22356 Striga asiatica HOM05D007685 ORTHO05D009136 4.4e-22 109.4 241 38.2
SGA_v2.0_scaffold36G14304 Striga asiatica HOM05D007685 ORTHO05D009136 9.7e-22 108.2 227 36.1
SGA_v2.0_scaffold205G41699 Striga asiatica HOM05D007685 ORTHO05D009136 2.2e-21 107.1 218 34.4
SGA_v2.0_scaffold52G19069 Striga asiatica HOM05D007685 ORTHO05D009136 2.8e-21 106.7 233 35.6
SGA_v2.0_scaffold186G40186 Striga asiatica HOM05D007685 ORTHO05D009136 8.2e-21 105.1 235 33.6
SGA_v2.0_scaffold3G01717 Striga asiatica HOM05D007685 ORTHO05D009136 3.1e-20 103.2 160 40.6
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 4.1e-20 102.8 243 33.3
SGA_v2.0_scaffold70G23612 Striga asiatica HOM05D007685 ORTHO05D009136 4.1e-20 102.8 239 35.6
SGA_v2.0_scaffold31G12686 Striga asiatica HOM05D007685 ORTHO05D009136 7.0e-20 102.1 263 32.3
SGA_v2.0_scaffold79G25498 Striga asiatica HOM05D007685 ORTHO05D009136 9.1e-20 101.7 218 32.6
SGA_v2.0_scaffold364G49991 Striga asiatica HOM05D007685 ORTHO05D009136 2.0e-19 100.5 222 35.6
SGA_v2.0_scaffold10G05461 Striga asiatica HOM05D007685 ORTHO05D009136 1.0e-18 98.2 144 40.3
SGA_v2.0_scaffold205G41695 Striga asiatica HOM05D007685 ORTHO05D009136 1.3e-18 97.8 169 39.1
Dinv22134 Davidia involucrata HOM05D007685 ORTHO05D009136 1.7e-18 97.4 229 34.9
SGA_v2.0_scaffold204G41656 Striga asiatica HOM05D007685 ORTHO05D009136 1.7e-18 97.4 178 37.6
SGA_v2.0_scaffold240G44172 Striga asiatica HOM05D007685 ORTHO05D009136 6.5e-18 95.5 226 35.0
Migut.B00574 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.5e-17 93.6 110 44.5
SGA_v2.0_scaffold240G44166 Striga asiatica HOM05D007685 ORTHO05D009136 9.4e-17 91.7 118 50.0
Migut.K00435 Erythranthe guttata HOM05D007685 ORTHO05D009136 6.1e-16 89.0 118 42.4
CAN.G423.42 Capsicum annuum HOM05D013589 ORTHO05D009136 1.8e-15 87.4 234 29.9
SGA_v2.0_scaffold240G44169 Striga asiatica HOM05D007685 ORTHO05D009136 1.8e-15 87.4 94 48.9
SGA_v2.0_scaffold27G11433 Striga asiatica HOM05D007685 ORTHO05D009136 3.0e-15 86.7 214 33.6
Dinv22139 Davidia involucrata HOM05D007685 ORTHO05D009136 3.4e-14 83.2 184 35.3
SGA_v2.0_scaffold110G31308 Striga asiatica HOM05D007685 ORTHO05D009136 2.2e-13 80.5 94 44.7
SGA_v2.0_scaffold27G11432 Striga asiatica HOM05D007685 ORTHO05D009136 6.3e-13 79.0 103 43.7
Dinv22142 Davidia involucrata HOM05D007685 ORTHO05D009136 1.1e-12 78.2 196 34.7
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.4e-12 77.8 215 30.2
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.4e-12 77.8 215 30.2
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 1.8e-12 77.4 249 27.7
Oeu049041.1 Olea europaea HOM05D000151 ORTHO05D000074 4.1e-12 76.3 167 35.9
Migut.G00592 Erythranthe guttata HOM05D000151 ORTHO05D000074 1.2e-11 74.7 218 32.1
Migut.K00649 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.7e-11 73.6 73 43.8
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 3.5e-11 73.2 248 27.4
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 3.5e-11 73.2 218 29.8
SGA_v2.0_scaffold205G41697 Striga asiatica HOM05D007685 ORTHO05D009136 4.5e-11 72.8 134 37.3
Ciclev10006735m.g Citrus clementina HOM05D000151 ORTHO05D000074 7.7e-11 72.0 157 34.4
Dinv22135 Davidia involucrata HOM05D007685 ORTHO05D009136 7.7e-11 72.0 219 28.3
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 7.7e-11 72.0 165 33.3
Migut.K00246 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.0e-10 71.6 77 48.1
MD16G1228400 Malus domestica HOM05D000151 ORTHO05D000074 1.3e-10 71.2 161 32.9
Manes.07G051600 Manihot esculenta HOM05D000151 ORTHO05D000074 3.8e-10 69.7 167 33.5
TWI31G0065 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.0e-10 69.3 164 31.1
MD13G1223500 Malus domestica HOM05D000151 ORTHO05D000074 8.5e-10 68.6 212 27.4
MD14G1196300 Malus domestica HOM05D000151 ORTHO05D000074 1.5e-09 67.8 126 30.2
Migut.H00781 Erythranthe guttata HOM05D007685 ORTHO05D009136 3.2e-09 66.6 128 34.4
Oeu049040.1 Olea europaea HOM05D000151 ORTHO05D000074 3.2e-09 66.6 165 32.7
arahy.Tifrunner.gnm1.ann1.U0YPSU Arachis hypogaea HOM05D000151 ORTHO05D000074 9.4e-09 65.1 215 27.4
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 9.4e-09 65.1 162 34.0
SGA_v2.0_scaffold51G18692 Striga asiatica HOM05D007685 ORTHO05D009136 9.4e-09 65.1 189 32.8
TWI31G0931 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 9.4e-09 65.1 147 32.7
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.2e-08 64.7 125 36.8
Ciclev10006417m.g Citrus clementina HOM05D000151 ORTHO05D000074 1.6e-08 64.3 122 35.2
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 2.7e-08 63.5 222 29.7
EL10Ac4g08311 Beta vulgaris HOM05D000151 ORTHO05D000074 3.6e-08 63.2 159 33.3
SGA_v2.0_scaffold52G19067 Striga asiatica HOM05D007685 ORTHO05D009136 3.6e-08 63.2 104 41.3
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 4.7e-08 62.8 222 29.7
Actinidia09337 Actinidia chinensis HOM05D000151 ORTHO05D000074 1.0e-07 61.6 95 36.8
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 1.4e-07 61.2 167 31.7
Thecc.04G266500 Theobroma cacao HOM05D000151 ORTHO05D000074 1.8e-07 60.8 160 30.6
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.8e-07 60.8 165 29.7
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 2.3e-07 60.5 162 33.3
CAN.G587.82 Capsicum annuum HOM05D013589 ORTHO05D009136 2.3e-07 60.5 122 32.0
FAN03G0910 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.3e-07 60.5 158 30.4
FAN03G1127 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.3e-07 60.5 158 30.4
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.0e-07 60.1 159 28.9
Cfa009638 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.0e-07 60.1 201 28.9
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 3.0e-07 60.1 167 31.1
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.0e-07 60.1 165 29.7
FAN12G3235 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.2e-07 59.3 140 30.0
QL06p022014 Quercus lobata HOM05D000151 ORTHO05D000074 5.2e-07 59.3 178 28.7
SalBow3G3607 Salvia bowleyana HOM05D000050 ORTHO05D000771 5.2e-07 59.3 64 53.1
Nn3g21038 Nelumbo nucifera HOM05D000151 ORTHO05D000074 6.8e-07 58.9 132 33.3
SGA_v2.0_scaffold52G19068 Striga asiatica HOM05D007685 ORTHO05D009136 6.8e-07 58.9 107 40.2
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.8e-07 58.9 165 30.3
CiPaw.07G005300 Carya illinoinensis HOM05D000151 ORTHO05D000074 8.8e-07 58.5 120 33.3
Cc08_g14740 Coffea canephora HOM05D000151 ORTHO05D000074 8.8e-07 58.5 169 31.4
SGA_v2.0_scaffold123G33494 Striga asiatica HOM05D007685 ORTHO05D009136 8.8e-07 58.5 71 49.3
TAR628G0991 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.8e-07 58.5 150 33.3
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-06 58.2 165 30.3
Cc08_g15140 Coffea canephora HOM05D000151 ORTHO05D000074 2.0e-06 57.4 173 31.2
Thecc.04G267400 Theobroma cacao HOM05D000151 ORTHO05D000074 2.0e-06 57.4 165 29.1
Migut.B00570 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.6e-06 57.0 64 42.2
QL04p009567 Quercus lobata HOM05D000151 ORTHO05D000074 2.6e-06 57.0 116 34.5
HanXRQChr14g0428481 Helianthus annuus HOM05D000151 ORTHO05D000074 3.4e-06 56.6 161 34.2
MBI15_g35731_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 3.4e-06 56.6 164 29.9
MD06G1189300 Malus domestica HOM05D000151 ORTHO05D000074 4.4e-06 56.2 126 27.8
SGA_v2.0_scaffold52G19054 Striga asiatica HOM05D007685 ORTHO05D009136 4.4e-06 56.2 105 37.1
Cc10_g00920 Coffea canephora HOM05D000151 ORTHO05D000074 5.7e-06 55.8 168 33.9
QL04p009594 Quercus lobata HOM05D000151 ORTHO05D000074 5.7e-06 55.8 133 31.6
QL05p064445 Quercus lobata HOM05D000151 ORTHO05D000074 5.7e-06 55.8 122 32.8
Aqoxy7G03473 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.8e-06 55.1 128 31.2
HanXRQChr02g0042691 Helianthus annuus HOM05D000151 ORTHO05D000074 9.8e-06 55.1 161 33.5


User provided reference genes

Program Settings