Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05749 Striga asiatica HOM05D017992 ORTHO05D000126 7.0e-139 497.3 252 100.0
SGA_v2.0_scaffold250G45022 Striga asiatica HOM05D000003 ORTHO05D000004 6.1e-26 122.1 242 34.7
SGA_v2.0_scaffold9G04785 Striga asiatica HOM05D017409 ORTHO05D000126 7.5e-24 115.2 208 35.1
SGA_v2.0_scaffold19G08685 Striga asiatica HOM05D017992 ORTHO05D000126 6.0e-21 105.5 204 34.3
SGA_v2.0_scaffold83G26402 Striga asiatica HOM05D017992 ORTHO05D000126 5.0e-20 102.4 225 36.4
SGA_v2.0_scaffold14G07069 Striga asiatica HOM05D000367 ORTHO05D002159 5.1e-12 75.9 177 29.9
SGA_v2.0_scaffold17G08062 Striga asiatica HOM05D000003 ORTHO05D000006 5.6e-11 72.4 116 31.9
SGA_v2.0_scaffold77G25249 Striga asiatica HOM05D017992 ORTHO05D000126 1.6e-10 70.9 113 34.5
SGA_v2.0_scaffold151G36755 Striga asiatica HOM05D000003 ORTHO05D000004 4.7e-10 69.3 107 33.6
SGA_v2.0_scaffold15G07343 Striga asiatica HOM05D000003 ORTHO05D000126 6.2e-10 68.9 72 44.4
Hma1.2p1_0167F.1_g073680 Hydrangea macrophylla HOM05D000003 ORTHO05D000126 1.2e-08 64.7 109 38.5
SGA_v2.0_scaffold10G05166 Striga asiatica HOM05D016874 ORTHO05D000126 2.0e-08 63.9 63 42.9
SGA_v2.0_scaffold26G11223 Striga asiatica HOM05D057682 ORTHO05D000126 2.6e-08 63.5 178 30.9
SGA_v2.0_scaffold129G34162 Striga asiatica HOM05D010621 ORTHO05D000126 7.6e-08 62.0 115 33.0
Dinv19695 Davidia involucrata HOM05D000003 ORTHO05D000126 2.2e-07 60.5 114 28.9
SGA_v2.0_scaffold321G48584 Striga asiatica HOM05D010621 ORTHO05D000126 2.2e-07 60.5 129 27.1
SGA_v2.0_scaffold45G17215 Striga asiatica HOM05D010621 ORTHO05D000126 2.2e-07 60.5 233 24.0
Nitab4.5_0005843g0030 Nicotiana tabacum HOM05D007931 ORTHO05D010331 2.9e-07 60.1 47 46.8
PGSC0003DMG400020793 Solanum tuberosum HOM05D000003 ORTHO05D000126 2.9e-07 60.1 63 38.1
SGA_v2.0_scaffold332G48961 Striga asiatica HOM05D010621 ORTHO05D000126 2.9e-07 60.1 109 31.2
SGA_v2.0_scaffold79G25635 Striga asiatica HOM05D010621 ORTHO05D000126 2.9e-07 60.1 112 33.0
AUR62006279 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.7e-07 59.7 49 44.9
SGA_v2.0_scaffold23G10019 Striga asiatica HOM05D000003 ORTHO05D000004 3.7e-07 59.7 75 37.3
Nitab4.5_0003032g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000126 8.3e-07 58.5 47 44.7
Dinv44808 Davidia involucrata HOM05D000003 ORTHO05D000126 1.4e-06 57.8 81 34.6
AUR62032102 Chenopodium quinoa HOM05D000003 ORTHO05D000126 2.4e-06 57.0 49 44.9
AUR62035818 Chenopodium quinoa HOM05D000003 ORTHO05D000006 2.4e-06 57.0 49 42.9
TWI38G2234 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 2.4e-06 57.0 117 31.6
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.2e-06 56.6 47 40.4
AUR62000896 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.2e-06 56.6 49 40.8
AUR62003755 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.2e-06 56.6 49 40.8
AUR62019956 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.2e-06 56.6 49 44.9
AUR62030344 Chenopodium quinoa HOM05D000003 ORTHO05D000126 3.2e-06 56.6 49 44.9
Dinv24168 Davidia involucrata HOM05D000723 ORTHO05D001760 3.2e-06 56.6 81 34.6
QL03p023077 Quercus lobata HOM05D000003 ORTHO05D000126 3.2e-06 56.6 123 26.0
Nitab4.5_0004512g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000126 4.1e-06 56.2 47 44.7
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.1e-06 56.2 49 38.8
SGA_v2.0_scaffold283G46955 Striga asiatica HOM05D010621 ORTHO05D000126 4.1e-06 56.2 90 30.0
SGA_v2.0_scaffold73G24374 Striga asiatica HOM05D010621 ORTHO05D000126 5.4e-06 55.8 225 25.3
TWI31G0369 Tripterygium wilfordii HOM05D000003 ORTHO05D000126 5.4e-06 55.8 141 28.4
QL08p062799 Quercus lobata HOM05D033160 ORTHO05D000126 7.1e-06 55.5 65 38.5
QL93p1998_0054 Quercus lobata HOM05D033160 ORTHO05D000126 7.1e-06 55.5 65 38.5
SGA_v2.0_scaffold234G43650 Striga asiatica HOM05D037634 ORTHO05D000126 7.1e-06 55.5 68 32.4
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 9.2e-06 55.1 61 32.8
Dinv30133 Davidia involucrata HOM05D000003 ORTHO05D000126 9.2e-06 55.1 47 46.8
Dinv38130 Davidia involucrata HOM05D000003 ORTHO05D000126 9.2e-06 55.1 53 37.7
Nitab4.5_0001238g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000126 9.2e-06 55.1 106 31.1
SGA_v2.0_scaffold72G24063 Striga asiatica HOM05D000047 ORTHO05D000044 9.2e-06 55.1 72 36.1


User provided reference genes

Program Settings