Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 3.4e-242 841.3 434 100.0
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 1.2e-173 613.6 445 69.2
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 1.1e-168 597.0 472 66.7
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 5.2e-158 561.6 449 63.0
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 5.1e-153 545.0 449 60.6
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 2.4e-150 536.2 364 70.3
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 1.7e-148 530.0 442 60.2
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 2.2e-148 529.6 449 60.1
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 8.4e-148 527.7 432 60.6
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 4.2e-147 525.4 452 58.2
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 4.2e-147 525.4 442 58.8
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 4.2e-147 525.4 453 60.0
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 5.4e-147 525.0 443 60.9
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 9.2e-147 524.2 443 59.1
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 1.6e-146 523.5 439 61.0
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 1.6e-146 523.5 418 61.5
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 1.1e-144 517.3 446 57.6
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 1.1e-144 517.3 450 58.2
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 1.5e-144 516.9 435 63.7
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 2.5e-144 516.2 441 59.0
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 1.6e-143 513.5 446 58.5
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 1.1e-142 510.8 444 57.4
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 1.1e-142 510.8 451 57.2
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 1.4e-142 510.4 444 57.2
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 1.8e-142 510.0 434 59.7
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 6.9e-142 508.1 451 56.1
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 6.9e-142 508.1 444 56.8
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 6.9e-142 508.1 372 63.2
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 1.5e-141 506.9 449 57.9
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 2.0e-141 506.5 444 56.8
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 3.4e-141 505.8 372 62.9
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 3.8e-140 502.3 443 57.8
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 8.4e-140 501.1 445 55.5
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 1.4e-139 500.4 367 63.5
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 2.4e-139 499.6 437 58.6
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 2.4e-139 499.6 363 63.6
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 4.2e-139 498.8 444 58.3
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 4.2e-139 498.8 384 61.7
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 7.1e-139 498.0 444 58.6
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 7.1e-139 498.0 446 56.5
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 3.5e-138 495.7 354 64.1
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 6.0e-138 495.0 440 56.4
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 1.0e-137 494.2 434 56.0
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 1.3e-137 493.8 453 56.3
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 6.6e-137 491.5 445 56.2
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 6.6e-137 491.5 383 60.8
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 8.7e-137 491.1 443 54.9
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 1.1e-136 490.7 382 62.3
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 1.1e-136 490.7 383 60.6
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 1.5e-136 490.3 321 70.4
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 1.9e-136 490.0 449 55.7
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 2.5e-136 489.6 387 58.1
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 3.3e-136 489.2 444 54.3
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 4.3e-136 488.8 429 55.9
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 4.3e-136 488.8 448 54.7
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 4.3e-136 488.8 384 60.2
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 5.6e-136 488.4 387 59.2
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 9.6e-136 487.6 428 56.1
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 1.3e-135 487.3 445 54.2
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 1.6e-135 486.9 428 56.1
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 1.6e-135 486.9 414 58.7
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 1.6e-135 486.9 386 58.3
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 2.8e-135 486.1 447 56.8
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 4.8e-135 485.3 447 53.9
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 4.8e-135 485.3 538 49.3
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 1.8e-134 483.4 441 55.6
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 4.0e-134 482.3 434 55.5
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 4.0e-134 482.3 387 59.7
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 1.5e-133 480.3 428 55.6
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 2.0e-133 479.9 448 54.7
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 5.8e-133 478.4 428 54.9
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 5.8e-133 478.4 444 55.0
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 7.6e-133 478.0 442 57.0
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.3e-132 477.2 384 61.2
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 1.7e-132 476.9 387 59.2
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 3.8e-132 475.7 382 58.6
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 4.9e-132 475.3 439 56.0
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.1e-131 474.2 444 54.7
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 1.9e-131 473.4 428 54.9
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 3.2e-131 472.6 443 55.3
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 4.2e-131 472.2 373 60.6
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 9.3e-131 471.1 462 53.9
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 2.1e-130 469.9 345 64.6
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.0e-129 467.6 435 55.9
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 2.5e-128 463.0 423 54.1
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 2.4e-126 456.4 385 58.4
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 3.1e-126 456.1 445 53.0
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 6.9e-126 454.9 476 51.7
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 2.0e-125 453.4 386 58.3
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 9.3e-123 444.5 321 64.5
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 2.1e-122 443.4 363 57.9
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 7.9e-122 441.4 387 55.8
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 1.1e-120 437.6 354 60.2
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 2.0e-109 400.2 444 50.7
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 1.1e-102 377.9 358 53.6
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 5.7e-96 355.5 331 53.2
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 9.7e-96 354.8 365 46.6
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 6.5e-92 342.0 253 61.7
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.7e-84 317.4 411 40.4
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 6.1e-82 308.9 340 46.5
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 1.4e-81 307.8 291 55.3
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 4.0e-81 306.2 329 47.4
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 5.2e-81 305.8 326 47.5
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 5.7e-80 302.4 436 42.4
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 1.0e-68 265.0 405 36.3
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 1.1e-67 261.5 240 54.2
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 3.9e-60 236.5 374 32.6
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 5.2e-49 199.5 182 56.6
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 1.6e-37 161.4 131 58.0
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 1.6e-34 151.4 120 62.5
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 4.6e-29 133.3 133 51.9
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 9.3e-14 82.4 60 58.3
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 6.7e-12 76.3 48 66.7
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 1.1e-06 58.9 52 50.0


User provided reference genes

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