Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05722 Striga asiatica HOM05D007041 ORTHO05D008036 3.0e-57 224.9 114 100.0
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 3.6e-10 68.6 69 52.2
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 4.0e-09 65.1 105 34.3
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 4.0e-09 65.1 112 35.7
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 9.0e-09 63.9 84 45.2
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 1.2e-08 63.5 126 35.7
AL5G44060 Arabidopsis lyrata HOM05D007041 ORTHO05D008036 2.0e-08 62.8 64 42.2
CSS0039531 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 4.5e-08 61.6 78 39.7
CANSAT56G1227 Cannabis sativa HOM05D007041 ORTHO05D008036 5.8e-08 61.2 32 78.1
C08p36510 Brassica napus HOM05D007041 ORTHO05D008036 9.9e-08 60.5 43 62.8
BolC8t51234H Brassica oleracea HOM05D007041 ORTHO05D008036 9.9e-08 60.5 43 62.8
Migut.B01841 Erythranthe guttata HOM05D007041 ORTHO05D008036 1.3e-07 60.1 41 63.4
ECA236G3839 Erigeron canadensis HOM05D007041 ORTHO05D008036 1.7e-07 59.7 49 51.0
SalBow3G2736 Salvia bowleyana HOM05D007041 ORTHO05D008036 1.7e-07 59.7 38 71.1
AT3G61660 Arabidopsis thaliana HOM05D007041 ORTHO05D008036 2.2e-07 59.3 64 40.6
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 3.8e-07 58.5 35 65.7
A09p53730 Brassica napus HOM05D007041 ORTHO05D008036 3.8e-07 58.5 61 47.5
BraA09t40795Z Brassica rapa HOM05D007041 ORTHO05D008036 3.8e-07 58.5 61 47.5
Carub.0005s2835 Capsella rubella HOM05D007041 ORTHO05D008036 3.8e-07 58.5 50 50.0
CARHR171970 Cardamine hirsuta HOM05D007041 ORTHO05D008036 4.9e-07 58.2 50 50.0
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 6.4e-07 57.8 113 31.9
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 6.4e-07 57.8 51 51.0
AUR62023489 Chenopodium quinoa HOM05D007041 ORTHO05D008036 8.4e-07 57.4 39 61.5
Lsat_1_v5_gn_7_2180 Lactuca sativa HOM05D007041 ORTHO05D008036 8.4e-07 57.4 130 30.0
Lj3g0003817 Lotus japonicus HOM05D007041 ORTHO05D008036 8.4e-07 57.4 92 39.1
Sp5g01745 Schrenkiella parvula HOM05D007041 ORTHO05D008036 8.4e-07 57.4 33 69.7
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.1e-06 57.0 49 57.1
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.1e-06 57.0 49 57.1
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 1.1e-06 57.0 62 43.5
Thhalv10006386m.g Eutrema salsugineum HOM05D007041 ORTHO05D008036 1.4e-06 56.6 46 52.2
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.4e-06 56.6 49 57.1
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 1.4e-06 56.6 56 48.2
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 1.4e-06 56.6 56 48.2
Peaxi162Scf00843g00001 Petunia axillaris HOM05D007041 ORTHO05D008036 1.4e-06 56.6 63 46.0
Prupe.5G115500 Prunus persica HOM05D007041 ORTHO05D008036 1.9e-06 56.2 36 63.9
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 2.4e-06 55.8 57 52.6
Gohir.A12G234950 Gossypium hirsutum HOM05D007041 ORTHO05D008036 2.4e-06 55.8 32 71.9
Gohir.D12G236050 Gossypium hirsutum HOM05D007041 ORTHO05D008036 2.4e-06 55.8 32 71.9
Gorai.008G252800 Gossypium raimondii HOM05D007041 ORTHO05D008036 2.4e-06 55.8 32 71.9
Oeu007855.1 Olea europaea HOM05D007041 ORTHO05D008036 2.4e-06 55.8 49 49.0
Phvul.010G111500 Phaseolus vulgaris HOM05D007041 ORTHO05D008036 2.4e-06 55.8 40 52.5
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 2.4e-06 55.8 52 48.1
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 3.2e-06 55.5 31 71.0
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 3.2e-06 55.5 47 55.3
Nitab4.5_0000305g0050 Nicotiana tabacum HOM05D007041 ORTHO05D008036 3.2e-06 55.5 126 32.5
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 3.2e-06 55.5 88 37.5
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 4.2e-06 55.1 49 55.1
Oeu009948.1 Olea europaea HOM05D007041 ORTHO05D008036 4.2e-06 55.1 62 41.9
PGSC0003DMG400000096 Solanum tuberosum HOM05D007041 ORTHO05D008036 4.2e-06 55.1 113 31.0
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 5.5e-06 54.7 67 34.3
Nn2g15118 Nelumbo nucifera HOM05D007041 ORTHO05D008036 5.5e-06 54.7 120 29.2
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 5.5e-06 54.7 31 64.5
vmacro22515 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 5.5e-06 54.7 31 64.5
vmacro22516 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 5.5e-06 54.7 31 64.5
vmacro22517 Vaccinium macrocarpon HOM05D007041 ORTHO05D008036 5.5e-06 54.7 31 64.5
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 7.1e-06 54.3 97 35.1
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 7.1e-06 54.3 97 35.1
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 7.1e-06 54.3 43 51.2
Gohir.D07G144400 Gossypium hirsutum HOM05D007041 ORTHO05D008036 7.1e-06 54.3 44 61.4
Gorai.001G156400 Gossypium raimondii HOM05D007041 ORTHO05D008036 7.1e-06 54.3 44 61.4
Thecc.03G293400 Theobroma cacao HOM05D007041 ORTHO05D008036 7.1e-06 54.3 80 35.0
TPR.G7661 Trifolium pratense HOM05D007041 ORTHO05D008036 7.1e-06 54.3 95 41.1
Rhsim01G0170500 Rhododendron simsii HOM05D007041 ORTHO05D008036 9.3e-06 53.9 74 37.8


User provided reference genes

Program Settings