Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05717 Striga asiatica HOM05D005178 ORTHO05D006123 3.1e-134 481.9 254 100.0
Haze_15614 Corylus avellana HOM05D005178 ORTHO05D006123 5.2e-33 145.6 242 43.8
Nn1g01788 Nelumbo nucifera HOM05D005178 ORTHO05D006123 2.6e-32 143.3 233 36.1
Nn7g37376 Nelumbo nucifera HOM05D005178 ORTHO05D006123 2.2e-31 140.2 234 37.2
Dinv32550 Davidia involucrata HOM05D005178 ORTHO05D006123 8.4e-31 138.3 237 40.1
Oeu008679.1 Olea europaea HOM05D005178 ORTHO05D006123 1.9e-30 137.1 239 39.7
RcHm_v2.0_Chr1g0358651 Rosa chinensis HOM05D005178 ORTHO05D006123 2.4e-30 136.7 236 40.3
Sabra02G0144400 Salix brachista HOM05D005178 ORTHO05D006123 9.2e-30 134.8 234 37.6
CANSAT56G4005 Cannabis sativa HOM05D005178 ORTHO05D006123 1.6e-29 134.0 242 40.1
Gohir.D12G113800 Gossypium hirsutum HOM05D005178 ORTHO05D006123 7.8e-29 131.7 245 34.3
MBI06_g02230_MAGBIO Magnolia biondii HOM05D005178 ORTHO05D006123 1.7e-28 130.6 239 38.1
Gorai.008G123300 Gossypium raimondii HOM05D005178 ORTHO05D006123 3.0e-28 129.8 238 34.9
Hma1.2p1_2972F.1_g331100 Hydrangea macrophylla HOM05D005178 ORTHO05D006123 3.0e-28 129.8 238 36.1
Nitab4.5_0003779g0030 Nicotiana tabacum HOM05D005178 ORTHO05D006123 3.0e-28 129.8 234 40.2
FAN03G0560 Fragaria x ananassa HOM05D005178 ORTHO05D006123 8.6e-28 128.3 236 37.7
Gohir.D11G099200 Gossypium hirsutum HOM05D005178 ORTHO05D006123 8.6e-28 128.3 244 38.9
Peaxi162Scf00403g00074 Petunia axillaris HOM05D005178 ORTHO05D006123 8.6e-28 128.3 231 39.8
Thecc.01G348100 Theobroma cacao HOM05D005178 ORTHO05D006123 8.6e-28 128.3 243 38.7
Hma1.2p1_0384F.1_g141000 Hydrangea macrophylla HOM05D005178 ORTHO05D006123 1.9e-27 127.1 238 38.2
Gorai.007G105400 Gossypium raimondii HOM05D005178 ORTHO05D006123 2.5e-27 126.7 244 38.9
PGR042G2135 Punica granatum HOM05D005178 ORTHO05D006123 2.5e-27 126.7 240 37.9
Gohir.A11G094200 Gossypium hirsutum HOM05D005178 ORTHO05D006123 3.3e-27 126.3 244 38.9
QL04p059571 Quercus lobata HOM05D005178 ORTHO05D006123 4.3e-27 125.9 243 39.5
Rhsim07G0007300 Rhododendron simsii HOM05D005178 ORTHO05D006123 4.3e-27 125.9 241 38.6
Potri.014G094400 Populus trichocarpa HOM05D005178 ORTHO05D006123 5.6e-27 125.6 233 37.3
FAN06G0749 Fragaria x ananassa HOM05D005178 ORTHO05D006123 7.3e-27 125.2 244 37.7
CAN.G1651.2 Capsicum annuum HOM05D005178 ORTHO05D006123 9.6e-27 124.8 231 37.2
FAN10G2759 Fragaria x ananassa HOM05D005178 ORTHO05D006123 9.6e-27 124.8 236 37.3
Dinv43890 Davidia involucrata HOM05D005178 ORTHO05D006123 1.6e-26 124.0 238 37.8
FvH4_7g15840 Fragaria vesca HOM05D005178 ORTHO05D006123 1.6e-26 124.0 244 37.3
FAN06G4203 Fragaria x ananassa HOM05D005178 ORTHO05D006123 1.6e-26 124.0 251 36.7
SalBow5G4166 Salvia bowleyana HOM05D005178 ORTHO05D006123 1.6e-26 124.0 246 39.0
CSS0038689 Camellia sinensis var. sinensis HOM05D005178 ORTHO05D006123 4.7e-26 122.5 235 39.1
Duzib133G0451 Durio zibethinus HOM05D005178 ORTHO05D006123 8.1e-26 121.7 244 38.1
Potri.002G167300 Populus trichocarpa HOM05D005178 ORTHO05D006123 8.1e-26 121.7 240 36.2
FAN10G1950 Fragaria x ananassa HOM05D005178 ORTHO05D006123 1.8e-25 120.6 243 35.8
Duzib138G0021 Durio zibethinus HOM05D005178 ORTHO05D006123 6.9e-25 118.6 244 37.7
MD07G1144100 Malus domestica HOM05D005178 ORTHO05D006123 1.2e-24 117.9 236 39.8
Nitab4.5_0005619g0010 Nicotiana tabacum HOM05D005178 ORTHO05D006123 1.2e-24 117.9 230 31.7
Actinidia10100 Actinidia chinensis HOM05D005178 ORTHO05D006123 1.5e-24 117.5 238 38.7
AL4G45600 Arabidopsis lyrata HOM05D005178 ORTHO05D006123 3.4e-24 116.3 253 33.6
Lj7A504T56 Lonicera japonica HOM05D005178 ORTHO05D006123 3.4e-24 116.3 232 37.5
Peaxi162Scf00099g00191 Petunia axillaris HOM05D005178 ORTHO05D006123 7.6e-24 115.2 240 33.8
Aa31LG1G27670 Aethionema arabicum HOM05D005178 ORTHO05D006123 9.9e-24 114.8 234 33.3
Gohir.D08G147400 Gossypium hirsutum HOM05D005178 ORTHO05D006123 9.9e-24 114.8 232 32.8
Gorai.004G153000 Gossypium raimondii HOM05D005178 ORTHO05D006123 9.9e-24 114.8 232 33.2
HPP92_005223 Vanilla planifolia HOM05D005178 ORTHO05D006123 9.9e-24 114.8 236 33.9
Manes.05G026400 Manihot esculenta HOM05D005178 ORTHO05D006123 1.7e-23 114.0 239 33.5
AT2G46300 Arabidopsis thaliana HOM05D005178 ORTHO05D006123 2.2e-23 113.6 254 33.9
C03p30470 Brassica napus HOM05D005178 ORTHO05D006123 2.2e-23 113.6 245 36.3
BolC3t15395H Brassica oleracea HOM05D005178 ORTHO05D006123 2.2e-23 113.6 245 36.3
Nitab4.5_0002262g0140 Nicotiana tabacum HOM05D005178 ORTHO05D006123 2.9e-23 113.2 231 36.8
ClCG08G003840 Citrullus lanatus HOM05D005178 ORTHO05D006123 3.8e-23 112.8 253 37.5
PGSC0003DMG400019400 Solanum tuberosum HOM05D005178 ORTHO05D006123 4.9e-23 112.5 228 36.0
CiPaw.01G071600 Carya illinoinensis HOM05D005178 ORTHO05D006123 6.4e-23 112.1 237 37.6
CiPaw.02G038200 Carya illinoinensis HOM05D005178 ORTHO05D006123 6.4e-23 112.1 240 35.4
Gohir.A08G126100 Gossypium hirsutum HOM05D005178 ORTHO05D006123 1.1e-22 111.3 233 34.8
Solyc10g011750.3 Solanum lycopersicum HOM05D005178 ORTHO05D006123 1.4e-22 110.9 228 35.5
Sopen10g005540 Solanum pennellii HOM05D005178 ORTHO05D006123 1.4e-22 110.9 228 35.5
Atru.chr5.616 Acer truncatum HOM05D005178 ORTHO05D006123 4.2e-22 109.4 244 37.3
BcaC02g12521 Brassica carinata HOM05D005178 ORTHO05D006123 5.4e-22 109.0 256 35.5
C04p01700 Brassica napus HOM05D005178 ORTHO05D006123 5.4e-22 109.0 256 35.5
BolC4t21822H Brassica oleracea HOM05D005178 ORTHO05D006123 5.4e-22 109.0 256 35.5
Lj1g0025938 Lotus japonicus HOM05D005178 ORTHO05D006123 5.4e-22 109.0 232 34.9
Nitab4.5_0000522g0010 Nicotiana tabacum HOM05D005178 ORTHO05D006123 5.4e-22 109.0 209 32.5
BcaC01g05079 Brassica carinata HOM05D005178 ORTHO05D006123 9.3e-22 108.2 248 36.7
A05p01500 Brassica napus HOM05D005178 ORTHO05D006123 9.3e-22 108.2 249 35.7
BraA05t19146Z Brassica rapa HOM05D005178 ORTHO05D006123 9.3e-22 108.2 249 35.7
BolC3t16162H Brassica oleracea HOM05D005178 ORTHO05D006123 2.1e-21 107.1 243 37.0
PSO384G3117 Papaver somniferum HOM05D005178 ORTHO05D006123 3.5e-21 106.3 236 32.6
PSO135G0875 Papaver somniferum HOM05D005178 ORTHO05D006123 4.6e-21 105.9 236 32.6
Sed0008780 Sechium edule HOM05D005178 ORTHO05D006123 7.8e-21 105.1 230 35.7
CsaV3_3G008390 Cucumis sativus L. HOM05D000050 ORTHO05D000380 1.0e-20 104.8 234 36.3
Phvul.006G110000 Phaseolus vulgaris HOM05D005178 ORTHO05D006123 1.3e-20 104.4 254 33.5
THA.LOC104802056 Tarenaya hassleriana HOM05D005178 ORTHO05D006123 1.7e-20 104.0 240 37.9
Aqoxy7G00174 Aquilegia oxysepala HOM05D005178 ORTHO05D006123 2.3e-20 103.6 247 35.6
C03p38880 Brassica napus HOM05D005178 ORTHO05D006123 5.1e-20 102.4 251 33.9
Sc01g0002990 Simmondsia chinensis HOM05D005178 ORTHO05D006123 5.1e-20 102.4 242 34.7
Aa31LG5G850 Aethionema arabicum HOM05D005178 ORTHO05D006123 1.5e-19 100.9 246 30.5
A03p31890 Brassica napus HOM05D005178 ORTHO05D006123 1.5e-19 100.9 249 36.1
Ciclev10021837m.g Citrus clementina HOM05D005178 ORTHO05D006123 1.5e-19 100.9 239 38.1
BcaB01g02336 Brassica carinata HOM05D005178 ORTHO05D006123 2.5e-19 100.1 243 37.4
Thhalv10001596m.g Eutrema salsugineum HOM05D005178 ORTHO05D006123 2.5e-19 100.1 247 31.2
MELO3C006056.2 Cucumis melo HOM05D005178 ORTHO05D006123 5.6e-19 99.0 234 36.3
Prupe.2G183000 Prunus persica HOM05D005178 ORTHO05D006123 5.6e-19 99.0 236 36.0
Sed0006216 Sechium edule HOM05D005178 ORTHO05D006123 5.6e-19 99.0 228 29.4
Sed0019896 Sechium edule HOM05D005178 ORTHO05D006123 5.6e-19 99.0 250 35.6
THA.LOC104817334 Tarenaya hassleriana HOM05D005178 ORTHO05D006123 1.3e-18 97.8 244 35.2
BcaC01g06846 Brassica carinata HOM05D005178 ORTHO05D006123 1.6e-18 97.4 243 36.2
CsaV3_6G003970 Cucumis sativus L. HOM05D005178 ORTHO05D006123 6.2e-18 95.5 246 34.6
BcaB01g03231 Brassica carinata HOM05D005178 ORTHO05D006123 8.1e-18 95.1 245 34.3
BcaC01g05085 Brassica carinata HOM05D005178 ORTHO05D006123 8.1e-18 95.1 245 34.3
Ca_09491_v3 Cicer arietinum L. HOM05D005178 ORTHO05D006123 2.4e-17 93.6 239 34.3
MD01G1075000 Malus domestica HOM05D005178 ORTHO05D006123 2.4e-17 93.6 235 35.3
Carub.0004s2900 Capsella rubella HOM05D005178 ORTHO05D006123 3.1e-17 93.2 241 31.1
vmacro13200 Vaccinium macrocarpon HOM05D005178 ORTHO05D006123 3.1e-17 93.2 195 39.5
Thhalv10028895m.g Eutrema salsugineum HOM05D005178 ORTHO05D006123 5.3e-17 92.4 245 35.1
A03p25540 Brassica napus HOM05D005178 ORTHO05D006123 6.9e-17 92.0 245 34.3
BraA03t11771Z Brassica rapa HOM05D005178 ORTHO05D006123 6.9e-17 92.0 245 34.3
HPP92_026775 Vanilla planifolia HOM05D005178 ORTHO05D006123 1.5e-16 90.9 239 34.3
ATR1127G036 Amborella trichopoda HOM05D005178 ORTHO05D006123 2.6e-16 90.1 239 32.2
CARHR249180 Cardamine hirsuta HOM05D005178 ORTHO05D006123 2.6e-16 90.1 252 34.1
AL6G52250 Arabidopsis lyrata HOM05D005178 ORTHO05D006123 4.5e-16 89.4 247 34.4
Carub.0001s0080 Capsella rubella HOM05D005178 ORTHO05D006123 4.5e-16 89.4 245 34.3
BcaC03g16062 Brassica carinata HOM05D005178 ORTHO05D006123 5.8e-16 89.0 248 35.1
C02p38280 Brassica napus HOM05D005178 ORTHO05D006123 7.6e-16 88.6 248 35.1
Carub.0006s3617 Capsella rubella HOM05D005178 ORTHO05D006123 7.6e-16 88.6 256 34.0
CARHR000970 Cardamine hirsuta HOM05D005178 ORTHO05D006123 7.6e-16 88.6 240 30.4
MELO3C029922.2 Cucumis melo HOM05D005178 ORTHO05D006123 7.6e-16 88.6 244 33.6
AT4G01110 Arabidopsis thaliana HOM05D005178 ORTHO05D006123 9.9e-16 88.2 249 34.1
THA.LOC104825868 Tarenaya hassleriana HOM05D005178 ORTHO05D006123 1.3e-15 87.8 244 34.4
BraA02t07418Z Brassica rapa HOM05D005178 ORTHO05D006123 2.2e-15 87.0 248 35.1
BolC2t09843H Brassica oleracea HOM05D005178 ORTHO05D006123 2.9e-15 86.7 248 34.7
Medtr7g116930 Medicago truncatula HOM05D005178 ORTHO05D006123 3.8e-15 86.3 242 31.8
AL1G10980 Arabidopsis lyrata HOM05D005178 ORTHO05D006123 4.9e-15 85.9 241 32.0
Sp4g28340 Schrenkiella parvula HOM05D005178 ORTHO05D006123 6.4e-15 85.5 245 31.8
SHI13195 Sapria himalayana HOM05D005178 ORTHO05D006123 8.4e-15 85.1 240 26.2
C05p00550 Brassica napus HOM05D005178 ORTHO05D006123 1.1e-14 84.7 246 34.1
BcaB03g13583 Brassica carinata HOM05D005178 ORTHO05D006123 1.4e-14 84.3 246 33.7
BolC5t28844H Brassica oleracea HOM05D005178 ORTHO05D006123 1.4e-14 84.3 246 34.1
BraA10t42331Z Brassica rapa HOM05D005178 ORTHO05D006123 1.4e-14 84.3 248 32.7
CARHR141580 Cardamine hirsuta HOM05D005178 ORTHO05D006123 1.9e-14 84.0 244 29.5
A10p00520 Brassica napus HOM05D005178 ORTHO05D006123 2.4e-14 83.6 246 33.3
Glyma.19G252900 Glycine max HOM05D005178 ORTHO05D006123 7.1e-14 82.0 238 31.9
Glyma.03G255300 Glycine max HOM05D005178 ORTHO05D006123 1.2e-13 81.3 235 30.6
Sp1g00860 Schrenkiella parvula HOM05D005178 ORTHO05D006123 2.1e-13 80.5 241 32.8
TAR633G1539 Trochodendron aralioides HOM05D000050 ORTHO05D010482 2.1e-13 80.5 233 33.5
Gohir.A12G110633 Gossypium hirsutum HOM05D005178 ORTHO05D006123 2.7e-13 80.1 138 34.8
TWI14G0215 Tripterygium wilfordii HOM05D005178 ORTHO05D006123 4.6e-13 79.3 156 31.4
BraA03t12361Z Brassica rapa HOM05D005178 ORTHO05D006123 7.9e-13 78.6 247 32.0
Aa31LG1G10830 Aethionema arabicum HOM05D005178 ORTHO05D006123 1.3e-12 77.8 244 31.1
AT1G01453 Arabidopsis thaliana HOM05D005178 ORTHO05D006123 1.8e-12 77.4 243 32.5
Lalb_Chr04g0261721 Lupinus albus HOM05D005178 ORTHO05D006123 1.1e-11 74.7 169 26.6
TPR.G6537 Trifolium pratense HOM05D002137 ORTHO05D002144 3.3e-11 73.2 153 30.7
Migut.I01027 Erythranthe guttata HOM05D002137 ORTHO05D002144 4.3e-11 72.8 184 25.5
Sc23g0005630 Simmondsia chinensis HOM05D002137 ORTHO05D002144 7.4e-11 72.0 202 29.7
HPP92_020005 Vanilla planifolia HOM05D002137 ORTHO05D002144 7.4e-11 72.0 175 28.6
Sabra14G0069000 Salix brachista HOM05D005178 ORTHO05D006123 9.6e-11 71.6 142 29.6
Lalb_Chr14g0372801 Lupinus albus HOM05D002137 ORTHO05D002144 2.1e-10 70.5 152 32.2
TAR375G0073 Trochodendron aralioides HOM05D005178 ORTHO05D006123 1.1e-09 68.2 101 40.6
A02p24280 Brassica napus HOM05D005178 ORTHO05D006123 2.4e-09 67.0 179 31.3
Cc04_g01920 Coffea canephora HOM05D002137 ORTHO05D002144 5.3e-09 65.9 211 29.9
SGA_v2.0_scaffold68G22917 Striga asiatica HOM05D002137 ORTHO05D002144 6.9e-09 65.5 184 25.0
Cc08_g10660 Coffea canephora HOM05D002137 ORTHO05D002144 2.6e-08 63.5 229 27.5
unitig_26.g8929 Utricularia gibba HOM05D002137 ORTHO05D002144 2.6e-08 63.5 245 24.9
Ca_23320_v3 Cicer arietinum L. HOM05D002137 ORTHO05D002144 5.8e-08 62.4 246 26.8
Lj7P270T4 Lonicera japonica HOM05D002137 ORTHO05D002144 5.8e-08 62.4 155 25.2
Lj6g0010191 Lotus japonicus HOM05D008517 ORTHO05D010482 1.7e-07 60.8 199 23.6
Lalb_Chr18g0054121 Lupinus albus HOM05D008517 ORTHO05D010482 1.7e-07 60.8 207 22.7
Prupe.3G049400 Prunus persica HOM05D002137 ORTHO05D002144 1.7e-07 60.8 220 27.7
Sc12g0003700 Simmondsia chinensis HOM05D000733 ORTHO05D000649 1.7e-07 60.8 146 28.1
Actinidia23156 Actinidia chinensis HOM05D000033 ORTHO05D000913 2.2e-07 60.5 190 25.3
Os02g0261000 Oryza sativa ssp. japonica HOM05D058753 ORTHO05D006123 2.9e-07 60.1 216 23.6
Thhalv10015370m.g Eutrema salsugineum HOM05D002137 ORTHO05D002144 8.4e-07 58.5 154 26.6
Oeu011891.1 Olea europaea HOM05D002137 ORTHO05D002144 8.4e-07 58.5 153 25.5
SEGI_01812 Sequoiadendron giganteum HOM05D000973 ORTHO05D000652 1.1e-06 58.2 221 26.2
TPR.G13887 Trifolium pratense HOM05D008517 ORTHO05D010482 1.4e-06 57.8 215 21.9
ATR0043G050 Amborella trichopoda HOM05D000733 ORTHO05D000649 1.9e-06 57.4 164 23.8
DCAR_015500 Daucus carota HOM05D000980 ORTHO05D000649 1.9e-06 57.4 150 26.7
Pp3c10_5660 Physcomitrium patens HOM05D000733 ORTHO05D000652 1.9e-06 57.4 163 23.3
Actinidia21764 Actinidia chinensis HOM05D002137 ORTHO05D002144 2.4e-06 57.0 150 27.3
CDE08G0759 Ceratophyllum demersum HOM05D002649 ORTHO05D002838 2.4e-06 57.0 205 27.3
Cpa.g.sc104.46 Carica papaya HOM05D002687 ORTHO05D002052 3.2e-06 56.6 187 24.1
PGR119G1844 Punica granatum HOM05D008517 ORTHO05D010482 3.2e-06 56.6 172 28.5
Psat3g003480 Pisum sativum HOM05D005178 ORTHO05D006123 4.2e-06 56.2 124 25.8
Potri.001G218300 Populus trichocarpa HOM05D002687 ORTHO05D002052 9.3e-06 55.1 225 27.1
Potri.009G003800 Populus trichocarpa HOM05D000980 ORTHO05D000649 9.3e-06 55.1 148 26.4


User provided reference genes

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