Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05702 Striga asiatica HOM05D000716 ORTHO05D009512 8.1e-129 463.8 238 100.0
SGA_v2.0_scaffold79G25617 Striga asiatica HOM05D000716 ORTHO05D009512 9.6e-29 131.3 164 53.7
MSTRG.21886 Avicennia marina HOM05D000716 ORTHO05D009512 2.5e-21 106.7 167 43.7
Oeu032619.1 Olea europaea HOM05D000716 ORTHO05D009512 2.5e-21 106.7 167 43.1
Migut.N00228 Erythranthe guttata HOM05D000716 ORTHO05D009512 6.2e-20 102.1 164 42.1
Cfa008405 Carpinus fangiana HOM05D000716 ORTHO05D009512 8.1e-20 101.7 165 43.0
Haze_11263 Corylus avellana HOM05D000716 ORTHO05D009512 4.0e-19 99.4 165 43.0
QL06p014932 Quercus lobata HOM05D000716 ORTHO05D009512 5.3e-19 99.0 165 43.0
Cpa.g.sc58.16 Carica papaya HOM05D000716 ORTHO05D009512 6.9e-19 98.6 164 40.2
Dinv44606 Davidia involucrata HOM05D000716 ORTHO05D009512 9.0e-19 98.2 167 41.3
Peaxi162Scf00788g00218 Petunia axillaris HOM05D000716 ORTHO05D009512 3.4e-18 96.3 164 40.9
Lj6A652T29 Lonicera japonica HOM05D000716 ORTHO05D009512 4.5e-18 95.9 165 42.4
Phvul.003G138252 Phaseolus vulgaris HOM05D000716 ORTHO05D009512 4.5e-18 95.9 164 40.2
Manes.04G103400 Manihot esculenta HOM05D000716 ORTHO05D009512 5.8e-18 95.5 164 40.2
TPR.G32765 Trifolium pratense HOM05D000716 ORTHO05D009512 5.8e-18 95.5 164 42.1
CSS0035052 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 1.3e-17 94.4 164 40.9
VMungo0720G2630 Vigna mungo HOM05D000716 ORTHO05D009512 1.7e-17 94.0 165 41.8
CAN.G749.27 Capsicum annuum HOM05D000716 ORTHO05D009512 2.2e-17 93.6 173 38.7
Sabra10G0063700 Salix brachista HOM05D000716 ORTHO05D009512 2.9e-17 93.2 165 40.6
Potri.010G079200 Populus trichocarpa HOM05D000716 ORTHO05D009512 3.8e-17 92.8 165 40.0
Gohir.A09G221500 Gossypium hirsutum HOM05D000716 ORTHO05D009512 4.9e-17 92.4 178 37.6
Gorai.006G245100 Gossypium raimondii HOM05D000716 ORTHO05D009512 4.9e-17 92.4 178 37.1
Eucgr.H03185 Eucalyptus grandis HOM05D000716 ORTHO05D009512 6.4e-17 92.0 165 38.8
Gohir.D09G223600 Gossypium hirsutum HOM05D000716 ORTHO05D009512 6.4e-17 92.0 178 37.1
Thecc.04G243000 Theobroma cacao HOM05D000716 ORTHO05D009512 6.4e-17 92.0 164 39.6
Psat1g100320 Pisum sativum HOM05D000716 ORTHO05D009512 1.1e-16 91.3 165 40.6
Cc03_g04580 Coffea canephora HOM05D000716 ORTHO05D009512 1.9e-16 90.5 167 40.7
Duzib212G0257 Durio zibethinus HOM05D000716 ORTHO05D009512 2.4e-16 90.1 164 39.0
Prupe.1G025700 Prunus persica HOM05D000716 ORTHO05D009512 3.2e-16 89.7 164 39.0
Rhsim02G0032200 Rhododendron simsii HOM05D000716 ORTHO05D009512 3.2e-16 89.7 161 41.0
CSS0012551 Camellia sinensis var. sinensis HOM05D000716 ORTHO05D009512 4.2e-16 89.4 164 40.9
Glyma.10G179500 Glycine max HOM05D000716 ORTHO05D009512 4.2e-16 89.4 165 41.2
Nitab4.5_0001856g0060 Nicotiana tabacum HOM05D000716 ORTHO05D009512 4.2e-16 89.4 164 39.0
PGSC0003DMG400006102 Solanum tuberosum HOM05D000716 ORTHO05D009512 4.2e-16 89.4 164 37.8
vmacro15398 Vaccinium macrocarpon HOM05D000716 ORTHO05D009512 4.2e-16 89.4 160 40.0
Ca_09881_v3 Cicer arietinum L. HOM05D000716 ORTHO05D009512 5.4e-16 89.0 164 39.0
Ciclev10004235m.g Citrus clementina HOM05D000716 ORTHO05D009512 9.3e-16 88.2 165 40.0
Lalb_Chr06g0168971 Lupinus albus HOM05D000716 ORTHO05D009512 9.3e-16 88.2 165 40.0
TAR365G0786 Trochodendron aralioides HOM05D000716 ORTHO05D009512 1.6e-15 87.4 164 39.6
CANSAT78G2038 Cannabis sativa HOM05D000716 ORTHO05D009512 2.1e-15 87.0 165 38.2
Psat6g136880 Pisum sativum HOM05D000716 ORTHO05D009512 2.1e-15 87.0 164 39.0
Sopen09g031940 Solanum pennellii HOM05D000716 ORTHO05D009512 2.1e-15 87.0 164 37.2
TPR.G14029 Trifolium pratense HOM05D000716 ORTHO05D009512 2.1e-15 87.0 165 41.2
Actinidia05472 Actinidia chinensis HOM05D000716 ORTHO05D009512 2.7e-15 86.7 161 39.8
Nitab4.5_0001787g0020 Nicotiana tabacum HOM05D000716 ORTHO05D009512 2.7e-15 86.7 164 38.4
Solyc09g083060.4 Solanum lycopersicum HOM05D000716 ORTHO05D009512 2.7e-15 86.7 164 37.2
GSVIVG01018088001 Vitis vinifera HOM05D000716 ORTHO05D009512 3.5e-15 86.3 164 36.6
COL.COLO4_15759 Corchorus olitorius HOM05D000716 ORTHO05D009512 4.6e-15 85.9 164 38.4
MD16G1204600 Malus domestica HOM05D000716 ORTHO05D009512 6.0e-15 85.5 164 39.6
FvH4_4g01981 Fragaria vesca HOM05D000716 ORTHO05D009512 1.0e-14 84.7 163 39.3
FAN12G4304 Fragaria x ananassa HOM05D000716 ORTHO05D009512 1.0e-14 84.7 163 39.3
MD13G1203200 Malus domestica HOM05D000716 ORTHO05D009512 1.0e-14 84.7 165 40.6
PGR004G1429 Punica granatum HOM05D000716 ORTHO05D009512 1.8e-14 84.0 164 36.0
Glyma.02G001400 Glycine max HOM05D000716 ORTHO05D009512 2.3e-14 83.6 165 38.2
Medtr1g076400 Medicago truncatula HOM05D000716 ORTHO05D009512 2.3e-14 83.6 165 40.0
FAN22G1663 Fragaria x ananassa HOM05D000716 ORTHO05D009512 5.1e-14 82.4 163 38.7
Psat6g113600 Pisum sativum HOM05D000716 ORTHO05D009512 5.1e-14 82.4 165 39.4
SEGI_36693 Sequoiadendron giganteum HOM05D000716 ORTHO05D009512 5.1e-14 82.4 177 34.5
arahy.Tifrunner.gnm1.ann1.FW0N61 Arachis hypogaea HOM05D000716 ORTHO05D009512 6.7e-14 82.0 165 37.0
Lsat_1_v5_gn_3_124900 Lactuca sativa HOM05D000716 ORTHO05D009512 1.1e-13 81.3 170 34.1
PSO461G0082 Papaver somniferum HOM05D000716 ORTHO05D009512 1.1e-13 81.3 164 38.4
Nn3g19490 Nelumbo nucifera HOM05D000716 ORTHO05D009512 1.5e-13 80.9 165 37.6
DCAR_024195 Daucus carota HOM05D000716 ORTHO05D009512 2.5e-13 80.1 167 37.7
ATR0665G362 Amborella trichopoda HOM05D000716 ORTHO05D009512 3.3e-13 79.7 165 37.0
arahy.Tifrunner.gnm1.ann1.430W4N Arachis hypogaea HOM05D000716 ORTHO05D009512 3.3e-13 79.7 165 36.4
HanXRQChr13g0424651 Helianthus annuus HOM05D000716 ORTHO05D009512 3.3e-13 79.7 164 35.4
Lj5g0002941 Lotus japonicus HOM05D000716 ORTHO05D009512 4.3e-13 79.3 167 38.3
Aqoxy2G03501 Aquilegia oxysepala HOM05D000716 ORTHO05D009512 5.6e-13 79.0 167 34.1
RcHm_v2.0_Chr4g0388951 Rosa chinensis HOM05D000716 ORTHO05D009512 9.6e-13 78.2 162 35.8
Mapoly0002s0200 Marchantia polymorpha HOM05D000716 ORTHO05D009512 3.1e-11 73.2 167 32.3
CDE07G1951 Ceratophyllum demersum HOM05D000716 ORTHO05D009512 2.6e-10 70.1 166 36.7
Psat4g152480 Pisum sativum HOM05D000716 ORTHO05D009512 5.8e-10 68.9 167 32.3
ECA240G2824 Erigeron canadensis HOM05D000716 ORTHO05D009512 1.4e-08 64.3 166 30.7
Psat0s152g0120 Pisum sativum HOM05D000716 ORTHO05D009512 3.2e-08 63.2 66 47.0
SMO364G0870 Selaginella moellendorffii HOM05D000716 ORTHO05D004822 5.5e-08 62.4 173 29.5
SEGI_29821 Sequoiadendron giganteum HOM05D000716 ORTHO05D004822 1.6e-07 60.8 179 30.2
CAN.G481.53 Capsicum annuum HOM05D000716 ORTHO05D004822 1.3e-06 57.8 166 29.5
AagrBONN_evm.TU.Sc2ySwM_228.2520 Anthoceros agrestis HOM05D000716 ORTHO05D009512 1.8e-06 57.4 167 28.7
COL.COLO4_30650 Corchorus olitorius HOM05D007656 ORTHO05D008529 3.0e-06 56.6 65 46.2
HPP92_000594 Vanilla planifolia HOM05D000716 ORTHO05D009512 6.7e-06 55.5 165 32.7


User provided reference genes

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