Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05641 Striga asiatica HOM05D008906 ORTHO05D010752 3.4e-93 345.1 193 100.0
SGA_v2.0_scaffold163G38045 Striga asiatica HOM05D008906 ORTHO05D010752 6.8e-49 198.0 209 52.2
Sed0004553 Sechium edule HOM05D008906 ORTHO05D010752 1.6e-26 123.6 179 39.7
ClCG11G000600 Citrullus lanatus HOM05D008906 ORTHO05D010752 6.1e-26 121.7 180 41.1
Sed0001310 Sechium edule HOM05D008906 ORTHO05D010752 5.2e-25 118.6 179 37.4
ClCG03G011130 Citrullus lanatus HOM05D008906 ORTHO05D010752 6.8e-25 118.2 179 37.4
Lj3A898T32 Lonicera japonica HOM05D008906 ORTHO05D010752 1.5e-24 117.1 178 38.8
ClCG03G011160 Citrullus lanatus HOM05D008906 ORTHO05D010752 1.3e-23 114.0 179 35.8
Sed0018125 Sechium edule HOM05D008906 ORTHO05D010752 2.2e-23 113.2 179 36.9
MELO3C010005.2 Cucumis melo HOM05D008906 ORTHO05D010752 9.2e-22 107.8 179 35.8
MD09G1162800 Malus domestica HOM05D008906 ORTHO05D010752 4.6e-21 105.5 180 36.1
CsaV3_1G044120 Cucumis sativus L. HOM05D008906 ORTHO05D010752 1.0e-20 104.4 179 34.6
MD10G1107800 Malus domestica HOM05D008906 ORTHO05D010752 1.3e-20 104.0 179 35.8
MD17G1147800 Malus domestica HOM05D008906 ORTHO05D010752 6.6e-20 101.7 180 35.0
CSS0023788 Camellia sinensis var. sinensis HOM05D008906 ORTHO05D010752 2.3e-17 93.2 158 35.4
Ah.14g087280 Amaranthus hybridus HOM05D008906 ORTHO05D010752 6.8e-17 91.7 188 30.3
Lj1A515T9 Lonicera japonica HOM05D008906 ORTHO05D010752 4.9e-15 85.5 175 33.7
ClCG03G011150 Citrullus lanatus HOM05D008906 ORTHO05D010752 2.4e-14 83.2 179 38.5
Hma1.2p1_0543F.1_g175190 Hydrangea macrophylla HOM05D008906 ORTHO05D010752 1.6e-13 80.5 159 34.6
EL10Ac8g20498 Beta vulgaris HOM05D008906 ORTHO05D010752 3.5e-13 79.3 186 32.3
DCAR_016019 Daucus carota HOM05D008906 ORTHO05D010752 1.0e-12 77.8 185 36.8
DCAR_016018 Daucus carota HOM05D008906 ORTHO05D010752 1.3e-12 77.4 185 36.8
Actinidia30933 Actinidia chinensis HOM05D008906 ORTHO05D010752 5.1e-12 75.5 179 32.4
Os04g0309900 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 5.1e-12 75.5 179 35.2
Os04g0308600 Oryza sativa ssp. japonica HOM05D008906 ORTHO05D010752 6.6e-12 75.1 179 27.9
AUR62036570 Chenopodium quinoa HOM05D008906 ORTHO05D010752 1.5e-11 73.9 182 29.7
Dinv13668 Davidia involucrata HOM05D008906 ORTHO05D010752 1.5e-11 73.9 137 35.0
AUR62027397 Chenopodium quinoa HOM05D008906 ORTHO05D010752 3.3e-11 72.8 180 36.7
DCAR_015953 Daucus carota HOM05D008906 ORTHO05D010752 4.3e-11 72.4 184 39.1
Ah.14g087260 Amaranthus hybridus HOM05D008906 ORTHO05D010752 3.6e-10 69.3 183 35.0
Cre07.g321750 Chlamydomonas reinhardtii HOM05D008906 ORTHO05D010752 2.3e-09 66.6 171 30.4
Zm00001eb137480 Zea mays HOM05D008906 ORTHO05D010752 2.6e-08 63.2 184 27.7
AUR62031153 Chenopodium quinoa HOM05D008906 ORTHO05D010752 3.4e-08 62.8 182 35.2
Dinv13661 Davidia involucrata HOM05D008906 ORTHO05D010752 2.9e-07 59.7 111 36.0
Sc02g0003570 Simmondsia chinensis HOM05D014687 ORTHO05D010752 7.1e-06 55.1 131 31.3


User provided reference genes

Program Settings