Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05546 Striga asiatica HOM05D016084 ORTHO05D014211 1.2e-194 682.9 337 100.0
SGA_v2.0_scaffold446G51736 Striga asiatica HOM05D016084 ORTHO05D014211 2.3e-108 396.4 323 65.9
SGA_v2.0_scaffold124G33561 Striga asiatica HOM05D016084 ORTHO05D014211 3.9e-108 395.6 323 65.6
SGA_v2.0_scaffold68G22968 Striga asiatica HOM05D063762 ORTHO05D014211 1.7e-34 151.0 261 34.5
SGA_v2.0_scaffold294G47477 Striga asiatica HOM05D016084 ORTHO05D014211 5.3e-25 119.4 64 89.1
SGA_v2.0_scaffold360G49891 Striga asiatica HOM05D063762 ORTHO05D014211 5.9e-24 115.9 150 42.0
Migut.O00430 Erythranthe guttata HOM05D016084 ORTHO05D014211 7.2e-22 109.0 240 33.8
Hma1.2p1_0071F.1_g038190 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.7e-18 96.7 215 33.5
SGA_v2.0_scaffold93G28341 Striga asiatica HOM05D016084 ORTHO05D014211 5.3e-17 92.8 51 90.2
SGA_v2.0_scaffold57G20302 Striga asiatica HOM05D017547 ORTHO05D014211 4.5e-16 89.7 179 32.4
Hma1.2p1_0400F.1_g144590 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.0e-15 88.6 213 28.2
Dinv11430 Davidia involucrata HOM05D008850 ORTHO05D004107 2.9e-15 87.0 240 28.3
Hma1.2p1_0060F.1_g032860 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.8e-15 86.7 195 30.3
Hma1.2p1_0133F.1_g061350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 1.1e-14 85.1 200 28.0
Dinv05208 Davidia involucrata HOM05D008850 ORTHO05D004107 2.5e-14 84.0 206 27.7
Dinv24545 Davidia involucrata HOM05D008850 ORTHO05D004107 3.6e-13 80.1 209 29.2
Rhsim05G0156600 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.4e-12 78.2 211 29.9
SGA_v2.0_scaffold552G52881 Striga asiatica HOM05D017547 ORTHO05D014211 6.8e-12 75.9 112 36.6
Rhsim11G0046200 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-11 75.1 252 26.2
Dinv21773 Davidia involucrata HOM05D008850 ORTHO05D004107 2.0e-11 74.3 183 29.0
Migut.E00584 Erythranthe guttata HOM05D016084 ORTHO05D014211 3.4e-11 73.6 151 33.1
Dinv01152 Davidia involucrata HOM05D008850 ORTHO05D004107 5.7e-11 72.8 234 24.4
Dinv05613 Davidia involucrata HOM05D008850 ORTHO05D004107 5.7e-11 72.8 249 24.1
Hma1.2p1_0512F.1_g169320 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.5e-11 72.4 219 28.8
Dinv12394 Davidia involucrata HOM05D008850 ORTHO05D004107 2.2e-10 70.9 223 25.1
Lj8C477G0 Lonicera japonica HOM05D016084 ORTHO05D004107 1.4e-09 68.2 149 29.5
Dinv31185 Davidia involucrata HOM05D008850 ORTHO05D004107 5.4e-09 66.2 198 29.8
SGA_v2.0_scaffold10G05288 Striga asiatica HOM05D017547 ORTHO05D014211 7.0e-09 65.9 135 31.9
Rhsim02G0014700 Rhododendron simsii HOM05D000017 ORTHO05D000013 9.1e-09 65.5 193 26.9
Rhsim07G0151200 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.7e-08 63.9 123 31.7
Rhsim09G0050000 Rhododendron simsii HOM05D003191 ORTHO05D003656 2.7e-08 63.9 114 30.7
Hma1.2p1_0199F.1_g085640 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 3.5e-08 63.5 134 26.1
SGA_v2.0_scaffold313G48321 Striga asiatica HOM05D060151 ORTHO05D014211 4.5e-08 63.2 162 27.8
ECA247G2333 Erigeron canadensis HOM05D000017 ORTHO05D004107 5.9e-08 62.8 121 31.4
Rhsim04G0080400 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.9e-08 62.8 224 29.5
Rhsim01G0019400 Rhododendron simsii HOM05D008850 ORTHO05D004107 7.7e-08 62.4 190 24.7
HanXRQChr06g0172321 Helianthus annuus HOM05D008850 ORTHO05D004107 1.3e-07 61.6 138 31.2
SGA_v2.0_scaffold55G19789 Striga asiatica HOM05D016084 ORTHO05D014211 1.7e-07 61.2 121 33.9
Ah.10g025880 Amaranthus hybridus HOM05D009581 ORTHO05D004107 2.9e-07 60.5 99 28.3
CSS0012068 Camellia sinensis var. sinensis HOM05D000793 ORTHO05D000783 8.5e-07 58.9 192 23.4
Dinv22994 Davidia involucrata HOM05D009809 ORTHO05D004107 8.5e-07 58.9 141 27.0
Dinv37592 Davidia involucrata HOM05D001916 ORTHO05D003272 1.5e-06 58.2 196 28.6
Hma1.2p1_0181F.1_g079980 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 2.5e-06 57.4 146 28.8
Rhsim04G0159500 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.5e-06 57.4 227 23.3
Hma1.2p1_1228F.1_g268660 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-06 56.6 163 26.4
Hma1.2p1_2618F.1_g325525 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 4.2e-06 56.6 163 26.4
FAN17G2186 Fragaria x ananassa HOM05D027620 ORTHO05D029384 5.5e-06 56.2 94 29.8
Dinv18502 Davidia involucrata HOM05D008850 ORTHO05D004107 9.5e-06 55.5 207 24.2
SGA_v2.0_scaffold6G03405 Striga asiatica HOM05D024400 ORTHO05D004107 9.5e-06 55.5 138 33.3


User provided reference genes

Program Settings