Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05536 Striga asiatica HOM05D007090 ORTHO05D008993 1.2e-166 589.7 298 100.0
Migut.N01613 Erythranthe guttata HOM05D007090 ORTHO05D008993 2.8e-54 216.5 243 53.5
SalBow5G5305 Salvia bowleyana HOM05D007090 ORTHO05D008993 2.7e-52 209.9 288 45.8
MSTRG.4910 Avicennia marina HOM05D007090 ORTHO05D008993 6.1e-49 198.7 334 41.9
Potri.014G060700 Populus trichocarpa HOM05D007090 ORTHO05D008993 6.3e-46 188.7 273 42.5
vmacro22435 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 5.5e-42 175.6 168 56.0
vmacro13441 Vaccinium macrocarpon HOM05D007090 ORTHO05D008993 1.2e-41 174.5 321 39.3
Cc02_g24410 Coffea canephora HOM05D007090 ORTHO05D008993 1.6e-41 174.1 273 41.0
Thecc.01G382600 Theobroma cacao HOM05D007090 ORTHO05D008993 4.7e-41 172.6 249 42.6
Actinidia22817 Actinidia chinensis HOM05D007090 ORTHO05D008993 1.4e-40 171.0 280 40.7
Manes.05G048800 Manihot esculenta HOM05D007090 ORTHO05D008993 5.2e-40 169.1 142 55.6
Actinidia22762 Actinidia chinensis HOM05D007090 ORTHO05D008993 5.7e-39 165.6 253 41.9
GSVIVG01027682001 Vitis vinifera HOM05D007090 ORTHO05D008993 2.2e-38 163.7 286 38.1
Gohir.D11G083500 Gossypium hirsutum HOM05D007090 ORTHO05D008993 2.8e-38 163.3 253 40.7
Rhsim07G0031100 Rhododendron simsii HOM05D007090 ORTHO05D008993 3.1e-37 159.8 286 40.9
HanXRQChr03g0088131 Helianthus annuus HOM05D007090 ORTHO05D008993 5.4e-37 159.1 312 37.5
Lsat_1_v5_gn_4_45521 Lactuca sativa HOM05D007090 ORTHO05D008993 5.4e-37 159.1 286 37.4
Nitab4.5_0000859g0240 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.2e-36 157.9 302 36.1
Sc26g0001310 Simmondsia chinensis HOM05D007090 ORTHO05D008993 1.6e-36 157.5 298 35.9
TAR375G0613 Trochodendron aralioides HOM05D007090 ORTHO05D008993 2.0e-36 157.1 305 39.0
PGR042G2604 Punica granatum HOM05D007090 ORTHO05D008993 7.7e-36 155.2 275 37.1
CANSAT56G4322 Cannabis sativa HOM05D007090 ORTHO05D008993 2.3e-35 153.7 275 38.2
COL.COLO4_12490 Corchorus olitorius HOM05D007090 ORTHO05D008993 2.3e-35 153.7 146 54.1
Eucgr.E01513 Eucalyptus grandis HOM05D007090 ORTHO05D008993 2.3e-35 153.7 308 35.1
QL04p038719 Quercus lobata HOM05D007090 ORTHO05D008993 3.8e-35 152.9 267 37.5
CANSAT56G0199 Cannabis sativa HOM05D007090 ORTHO05D008993 5.0e-35 152.5 279 36.9
TPR.G4946 Trifolium pratense HOM05D007090 ORTHO05D008993 1.5e-34 151.0 261 37.2
CSS0011917 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.9e-34 150.6 190 44.7
Medtr4g026500 Medicago truncatula HOM05D007090 ORTHO05D008993 1.9e-34 150.6 301 34.6
Sabra14G0044500 Salix brachista HOM05D007090 ORTHO05D008993 2.5e-34 150.2 274 37.6
Glyma.03G032000 Glycine max HOM05D007090 ORTHO05D008993 4.3e-34 149.4 157 49.0
unitig_748.g7116 Utricularia gibba HOM05D007090 ORTHO05D008993 4.3e-34 149.4 249 43.8
CsaV3_6G008990 Cucumis sativus L. HOM05D007090 ORTHO05D008993 5.6e-34 149.1 289 38.1
CiPaw.13G032600 Carya illinoinensis HOM05D007090 ORTHO05D008993 9.5e-34 148.3 284 36.3
MD02G1210400 Malus domestica HOM05D007090 ORTHO05D008993 3.6e-33 146.4 287 35.5
Oeu051923.2 Olea europaea HOM05D007090 ORTHO05D008993 4.7e-33 146.0 266 40.2
Prupe.2G138200 Prunus persica HOM05D007090 ORTHO05D008993 8.0e-33 145.2 271 36.2
RcHm_v2.0_Chr1g0349121 Rosa chinensis HOM05D007090 ORTHO05D008993 8.0e-33 145.2 136 53.7
Hund17045 Selenicereus undatus HOM05D007090 ORTHO05D008993 8.0e-33 145.2 160 46.2
Atru.chr5.252 Acer truncatum HOM05D007090 ORTHO05D008993 1.4e-32 144.4 276 34.1
Lalb_Chr12g0207911 Lupinus albus HOM05D007090 ORTHO05D008993 1.8e-32 144.1 242 39.7
Peaxi162Scf00803g00118 Petunia axillaris HOM05D007090 ORTHO05D008993 1.8e-32 144.1 175 46.9
Ca_19835_v3 Cicer arietinum L. HOM05D007090 ORTHO05D008993 2.3e-32 143.7 295 34.2
Phvul.010G072500 Phaseolus vulgaris HOM05D007090 ORTHO05D008993 6.8e-32 142.1 259 35.5
PSO782G4184 Papaver somniferum HOM05D007090 ORTHO05D008993 2.0e-31 140.6 157 47.1
arahy.Tifrunner.gnm1.ann1.UP4D5N Arachis hypogaea HOM05D007090 ORTHO05D008993 2.6e-31 140.2 258 36.4
Lj3g0011300 Lotus japonicus HOM05D007090 ORTHO05D008993 3.4e-31 139.8 288 35.8
FAN10G4025 Fragaria x ananassa HOM05D007090 ORTHO05D008993 4.4e-31 139.4 148 50.0
Psat7g236160 Pisum sativum HOM05D007090 ORTHO05D008993 4.4e-31 139.4 285 34.7
THA.LOC104803743 Tarenaya hassleriana HOM05D007090 ORTHO05D008993 4.4e-31 139.4 274 36.9
FvH4_7g11100 Fragaria vesca HOM05D007090 ORTHO05D008993 9.8e-31 138.3 151 49.0
VMungo0331G0297 Vigna mungo HOM05D007090 ORTHO05D008993 1.7e-30 137.5 298 33.6
Duzib138G0673 Durio zibethinus HOM05D007090 ORTHO05D008993 4.9e-30 136.0 256 38.3
Aqoxy5G03901 Aquilegia oxysepala HOM05D007090 ORTHO05D008993 6.4e-30 135.6 158 45.6
ECA234G0545 Erigeron canadensis HOM05D007090 ORTHO05D008993 6.4e-30 135.6 249 37.8
PSO063G1752 Papaver somniferum HOM05D007090 ORTHO05D008993 6.4e-30 135.6 165 45.5
Sp6g00210 Schrenkiella parvula HOM05D007090 ORTHO05D008993 6.4e-30 135.6 262 37.0
Ciclev10021511m.g Citrus clementina HOM05D007090 ORTHO05D008993 3.2e-29 133.3 253 36.4
Haze_02682 Corylus avellana HOM05D007090 ORTHO05D008993 7.0e-29 132.1 248 36.3
FAN06G0781 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.6e-28 131.0 159 46.5
DCAR_015886 Daucus carota HOM05D007090 ORTHO05D008993 2.0e-28 130.6 256 37.9
FAN06G2008 Fragaria x ananassa HOM05D007090 ORTHO05D008993 2.0e-28 130.6 149 49.0
Hma1.2p1_0005F.1_g004490 Hydrangea macrophylla HOM05D007090 ORTHO05D008993 2.0e-28 130.6 283 34.3
EL10Ac1g00840 Beta vulgaris HOM05D007090 ORTHO05D008993 3.5e-28 129.8 155 46.5
AT1G73440 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 4.6e-28 129.4 239 37.7
AL6G53360 Arabidopsis lyrata HOM05D007090 ORTHO05D008993 5.9e-28 129.0 252 35.7
Ah.08g212650 Amaranthus hybridus HOM05D007090 ORTHO05D008993 7.8e-28 128.6 151 45.0
Gorai.007G089100 Gossypium raimondii HOM05D007090 ORTHO05D008993 1.0e-27 128.3 253 35.6
FAN10G1641 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.3e-27 127.9 278 35.6
Carub.0006s3709 Capsella rubella HOM05D007090 ORTHO05D008993 1.7e-27 127.5 150 46.7
Thhalv10028898m.g Eutrema salsugineum HOM05D007090 ORTHO05D008993 2.3e-27 127.1 245 37.6
FAN03G3027 Fragaria x ananassa HOM05D007090 ORTHO05D008993 3.0e-27 126.7 123 50.4
Nitab4.5_0008963g0010 Nicotiana tabacum HOM05D007090 ORTHO05D008993 1.5e-26 124.4 288 34.7
arahy.Tifrunner.gnm1.ann1.KQM8V4 Arachis hypogaea HOM05D007090 ORTHO05D008993 1.9e-26 124.0 248 35.1
BcaB01g02215 Brassica carinata HOM05D007090 ORTHO05D008993 5.6e-26 122.5 133 47.4
Aa31LG5G170 Aethionema arabicum HOM05D007090 ORTHO05D008993 7.3e-26 122.1 287 33.8
ATR0317G013 Amborella trichopoda HOM05D007090 ORTHO05D008993 9.5e-26 121.7 194 38.1
Dinv44119 Davidia involucrata HOM05D007090 ORTHO05D008993 1.2e-25 121.3 265 34.3
CARHR248180 Cardamine hirsuta HOM05D007090 ORTHO05D008993 2.8e-25 120.2 245 34.7
ClCG06G002820 Citrullus lanatus HOM05D007090 ORTHO05D008993 1.8e-24 117.5 301 34.9
Eucgr.E01517 Eucalyptus grandis HOM05D007090 ORTHO05D008993 8.9e-24 115.2 76 61.8
CSS0004451 Camellia sinensis var. sinensis HOM05D007090 ORTHO05D008993 1.2e-23 114.8 162 42.0
CAN.G1469.17 Capsicum annuum HOM05D007090 ORTHO05D008993 1.2e-23 114.8 303 31.7
Nn1g01037 Nelumbo nucifera HOM05D007090 ORTHO05D008993 4.4e-23 112.8 282 32.3
Os04g0534300 Oryza sativa ssp. japonica HOM05D007090 ORTHO05D008993 9.8e-23 111.7 165 40.6
BcaC04g24200 Brassica carinata HOM05D007090 ORTHO05D008993 3.7e-22 109.8 120 48.3
BolC9t52948H Brassica oleracea HOM05D007090 ORTHO05D008993 3.7e-22 109.8 120 48.3
A09p00730 Brassica napus HOM05D007090 ORTHO05D008993 6.4e-22 109.0 126 46.0
C09p00130 Brassica napus HOM05D007090 ORTHO05D008993 8.3e-22 108.6 126 46.0
BraA09t35687Z Brassica rapa HOM05D007090 ORTHO05D008993 8.3e-22 108.6 126 46.0
Sopen01g036660 Solanum pennellii HOM05D007090 ORTHO05D008993 8.3e-22 108.6 313 29.4
Solyc01g090920.3 Solanum lycopersicum HOM05D007090 ORTHO05D008993 1.2e-20 104.8 326 29.4
PGSC0003DMG400025974 Solanum tuberosum HOM05D007090 ORTHO05D008993 4.6e-20 102.8 303 30.7
FAN01G0616 Fragaria x ananassa HOM05D007090 ORTHO05D008993 1.7e-19 100.9 336 28.6
CDE04G3442 Ceratophyllum demersum HOM05D007090 ORTHO05D008993 3.9e-19 99.8 291 29.6
MELO3C022245.2 Cucumis melo HOM05D007090 ORTHO05D008993 6.6e-19 99.0 289 31.8
Cpa.g.sc49.155 Carica papaya HOM05D007090 ORTHO05D008993 3.3e-18 96.7 55 69.1
TWI23G0238 Tripterygium wilfordii HOM05D007090 ORTHO05D008993 3.3e-18 96.7 146 38.4
ECA234G4391 Erigeron canadensis HOM05D007090 ORTHO05D008993 4.3e-18 96.3 199 35.2
Sed0010456 Sechium edule HOM05D007090 ORTHO05D008993 5.2e-16 89.4 252 30.2
Pp3c13_5390 Physcomitrium patens HOM05D007090 ORTHO05D008993 2.9e-14 83.6 155 33.5
SMO137G0209 Selaginella moellendorffii HOM05D007090 ORTHO05D008993 1.4e-13 81.3 131 34.4
CBR_g23736 Chara braunii HOM05D007090 ORTHO05D008993 2.1e-12 77.4 89 39.3
SEGI_04858 Sequoiadendron giganteum HOM05D007090 ORTHO05D008993 6.0e-12 75.9 58 53.4
Gohir.A11G078900 Gossypium hirsutum HOM05D007090 ORTHO05D008993 3.0e-11 73.6 194 33.0
AT4G00140 Arabidopsis thaliana HOM05D007090 ORTHO05D008993 4.0e-08 63.2 99 40.4
Mapoly0035s0135 Marchantia polymorpha HOM05D007090 ORTHO05D008993 6.8e-08 62.4 138 29.7
SMO171G0115 Selaginella moellendorffii HOM05D000227 ORTHO05D004725 8.4e-06 55.5 65 40.0


User provided reference genes

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