Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold11G05529 Striga asiatica HOM05D004615 ORTHO05D000385 3.3e-195 684.9 348 100.0
SGA_v2.0_scaffold623G53232 Striga asiatica HOM05D004615 ORTHO05D000385 2.2e-135 486.1 372 72.3
SGA_v2.0_scaffold279G46788 Striga asiatica HOM05D004615 ORTHO05D000385 1.5e-86 323.9 174 90.8
SGA_v2.0_scaffold203G41524 Striga asiatica HOM05D004615 ORTHO05D000385 2.9e-50 203.4 126 88.1
SGA_v2.0_scaffold279G46789 Striga asiatica HOM05D004615 ORTHO05D000385 5.9e-43 179.1 172 64.5
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 2.2e-29 134.0 322 31.4
SGA_v2.0_scaffold39G15343 Striga asiatica HOM05D004615 ORTHO05D000385 5.3e-28 129.4 369 28.7
AUR62040355 Chenopodium quinoa HOM05D014060 ORTHO05D000385 2.0e-27 127.5 306 31.0
AUR62042512 Chenopodium quinoa HOM05D014060 ORTHO05D000385 1.1e-25 121.7 320 30.3
SGA_v2.0_scaffold251G45054 Striga asiatica HOM05D004615 ORTHO05D000385 1.9e-25 120.9 333 29.4
SGA_v2.0_scaffold528G52732 Striga asiatica HOM05D004615 ORTHO05D000385 2.1e-24 117.5 129 47.3
AUR62027608 Chenopodium quinoa HOM05D014060 ORTHO05D000385 5.2e-23 112.8 337 28.5
AUR62027663 Chenopodium quinoa HOM05D014060 ORTHO05D000385 5.2e-23 112.8 320 29.4
AUR62037964 Chenopodium quinoa HOM05D014060 ORTHO05D000385 1.7e-21 107.8 277 29.2
AUR62031351 Chenopodium quinoa HOM05D014060 ORTHO05D000385 1.6e-19 101.3 305 27.9
AUR62042476 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-18 98.2 76 55.3
AUR62004861 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.6e-16 90.1 71 50.7
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 6.1e-16 89.4 232 29.7
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 1.0e-15 88.6 232 29.3
AUR62024348 Chenopodium quinoa HOM05D014060 ORTHO05D000385 1.8e-15 87.8 306 28.8
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.8e-15 87.8 98 45.9
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 2.3e-15 87.4 284 28.2
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 2.3e-15 87.4 133 35.3
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 3.0e-15 87.0 93 40.9
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 1.5e-14 84.7 231 29.9
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.6e-14 84.0 76 48.7
AUR62035731 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-14 83.6 86 44.2
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 4.4e-14 83.2 131 35.9
AUR62005789 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.7e-14 82.8 353 23.5
AUR62040771 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.7e-14 82.8 216 28.7
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 5.7e-14 82.8 161 29.8
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 7.5e-14 82.4 321 26.2
Hund13368 Selenicereus undatus HOM05D009682 ORTHO05D000385 7.5e-14 82.4 121 36.4
EL10Ac2g02894 Beta vulgaris HOM05D004615 ORTHO05D000385 9.7e-14 82.0 235 27.2
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 1.7e-13 81.3 196 31.6
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.7e-13 81.3 79 48.1
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 2.2e-13 80.9 78 47.4
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 2.2e-13 80.9 109 39.4
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 2.2e-13 80.9 76 42.1
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 2.2e-13 80.9 76 42.1
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.8e-13 80.5 89 41.6
HanXRQChr04g0100871 Helianthus annuus HOM05D004615 ORTHO05D000385 3.7e-13 80.1 152 34.2
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 8.2e-13 79.0 109 37.6
Hund03863 Selenicereus undatus HOM05D009682 ORTHO05D000385 8.2e-13 79.0 265 24.9
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.1e-12 78.6 79 48.1
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-12 78.2 86 44.2
AUR62031112 Chenopodium quinoa HOM05D009343 ORTHO05D000385 2.4e-12 77.4 223 27.4
Sc11g0005200 Simmondsia chinensis HOM05D014970 ORTHO05D019369 3.1e-12 77.0 120 35.8
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 4.1e-12 76.6 78 46.2
AUR62043436 Chenopodium quinoa HOM05D009343 ORTHO05D000385 5.3e-12 76.3 85 42.4
HanXRQChr09g0240121 Helianthus annuus HOM05D004615 ORTHO05D000385 5.3e-12 76.3 138 34.8
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 5.3e-12 76.3 111 35.1
AUR62007768 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.0e-12 75.9 79 45.6
AUR62030145 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.0e-12 75.9 79 43.0
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.1e-12 75.5 225 29.3
AUR62037174 Chenopodium quinoa HOM05D009343 ORTHO05D000385 9.1e-12 75.5 212 28.3
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.2e-11 75.1 79 45.6
AUR62037264 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.2e-11 75.1 201 28.4
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-11 74.3 240 25.4
AUR62031149 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.0e-11 74.3 328 26.2
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 2.0e-11 74.3 80 42.5
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.7e-11 73.9 90 37.8
Sc06g0003990 Simmondsia chinensis HOM05D004615 ORTHO05D000385 2.7e-11 73.9 69 49.3
Sc07g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.5e-11 73.6 71 49.3
AUR62036837 Chenopodium quinoa HOM05D009343 ORTHO05D011970 5.9e-11 72.8 81 40.7
Sc22g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 5.9e-11 72.8 67 52.2
AUR62032537 Chenopodium quinoa HOM05D009343 ORTHO05D011970 7.7e-11 72.4 153 32.0
Sc22g0004480 Simmondsia chinensis HOM05D014970 ORTHO05D000385 7.7e-11 72.4 120 33.3
AUR62022305 Chenopodium quinoa HOM05D009343 ORTHO05D000385 1.0e-10 72.0 83 43.4
AUR62040424 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.0e-10 72.0 70 45.7
AUR62034499 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-10 71.6 82 42.7
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 1.3e-10 71.6 81 40.7
Psat7g143560 Pisum sativum HOM05D008859 ORTHO05D000385 1.3e-10 71.6 81 40.7
AUR62041732 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.7e-10 71.2 88 42.0
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.7e-10 71.2 134 29.1
Psat0s130g0040 Pisum sativum HOM05D008859 ORTHO05D000385 2.2e-10 70.9 81 42.0
Sopen12g015810 Solanum pennellii HOM05D007930 ORTHO05D007166 2.9e-10 70.5 145 31.0
AUR62002779 Chenopodium quinoa HOM05D009343 ORTHO05D000385 3.8e-10 70.1 142 32.4
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 5.0e-10 69.7 81 40.7
AUR62036502 Chenopodium quinoa HOM05D009343 ORTHO05D011970 6.5e-10 69.3 82 43.9
AUR62037194 Chenopodium quinoa HOM05D009343 ORTHO05D011970 8.5e-10 68.9 142 33.1
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 1.1e-09 68.6 81 39.5
Sc03g0005370 Simmondsia chinensis HOM05D009343 ORTHO05D000385 1.1e-09 68.6 71 45.1
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.1e-09 68.6 108 35.2
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.5e-09 68.2 319 22.6
AUR62035483 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.5e-09 68.2 76 43.4
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 1.9e-09 67.8 81 39.5
Sopen07g020910 Solanum pennellii HOM05D008041 ORTHO05D000385 1.9e-09 67.8 108 35.2
AUR62030337 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.5e-09 67.4 166 27.7
AUR62042816 Chenopodium quinoa HOM05D010065 ORTHO05D000385 2.5e-09 67.4 77 41.6
Psat5g082920 Pisum sativum HOM05D008859 ORTHO05D000385 2.5e-09 67.4 81 38.3
Psat5g250640 Pisum sativum HOM05D008859 ORTHO05D007166 2.5e-09 67.4 81 38.3
AUR62037118 Chenopodium quinoa HOM05D010065 ORTHO05D000385 3.2e-09 67.0 77 40.3
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.2e-09 67.0 87 40.2
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.2e-09 67.0 101 33.7
AUR62042814 Chenopodium quinoa HOM05D010065 ORTHO05D000385 4.2e-09 66.6 77 41.6
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 4.2e-09 66.6 122 35.2
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 4.2e-09 66.6 83 41.0
PGSC0003DMG400046273 Solanum tuberosum HOM05D008041 ORTHO05D000385 4.2e-09 66.6 97 35.1
AUR62029474 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.5e-09 66.2 69 46.4
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 5.5e-09 66.2 127 33.9
Sc09g0007350 Simmondsia chinensis HOM05D009343 ORTHO05D000385 5.5e-09 66.2 69 44.9
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 5.5e-09 66.2 108 34.3
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 5.5e-09 66.2 108 34.3
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 5.5e-09 66.2 108 34.3
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 5.5e-09 66.2 108 34.3
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 5.5e-09 66.2 108 34.3
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 5.5e-09 66.2 108 34.3
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 5.5e-09 66.2 108 34.3
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 7.2e-09 65.9 122 35.2
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 7.2e-09 65.9 122 35.2
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 7.2e-09 65.9 87 40.2
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 7.2e-09 65.9 124 30.6
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 7.2e-09 65.9 77 39.0
Psat0s776g0040 Pisum sativum HOM05D004615 ORTHO05D000385 9.4e-09 65.5 72 37.5
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 9.4e-09 65.5 73 43.8
AUR62013324 Chenopodium quinoa HOM05D010065 ORTHO05D000385 1.2e-08 65.1 122 29.5
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 1.2e-08 65.1 120 30.8
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 1.6e-08 64.7 79 38.0
EL10Ac1g01725 Beta vulgaris HOM05D004615 ORTHO05D000385 2.1e-08 64.3 86 38.4
AUR62002100 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.7e-08 63.9 84 36.9
AUR62042034 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.7e-08 63.9 69 44.9
PGSC0003DMG400004241 Solanum tuberosum HOM05D007930 ORTHO05D007166 2.7e-08 63.9 148 27.7
AUR62019515 Chenopodium quinoa HOM05D010065 ORTHO05D000385 3.6e-08 63.5 77 40.3
AUR62026239 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.6e-08 63.5 70 42.9
Sc18g0005230 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.6e-08 63.5 127 30.7
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 3.6e-08 63.5 101 32.7
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 4.7e-08 63.2 75 42.7
Solyc01g034040.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.7e-08 63.2 98 33.7
Solyc08g016567.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 4.7e-08 63.2 96 35.4
Sopen04g011930 Solanum pennellii HOM05D007930 ORTHO05D007166 4.7e-08 63.2 82 35.4
arahy.Tifrunner.gnm1.ann1.JJQZ3I Arachis hypogaea HOM05D009636 ORTHO05D011783 6.1e-08 62.8 93 37.6
PGSC0003DMG400039419 Solanum tuberosum HOM05D007930 ORTHO05D007166 6.1e-08 62.8 76 42.1
HanXRQChr02g0040071 Helianthus annuus HOM05D004615 ORTHO05D000385 8.0e-08 62.4 68 44.1
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 1.0e-07 62.0 70 44.3
vmacro01714 Vaccinium macrocarpon HOM05D005763 ORTHO05D005970 1.0e-07 62.0 73 45.2
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 1.4e-07 61.6 153 28.8
Hund12189 Selenicereus undatus HOM05D004615 ORTHO05D000385 1.4e-07 61.6 80 35.0
AUR62006471 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.8e-07 61.2 71 40.8
AUR62027501 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.8e-07 61.2 53 47.2
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.8e-07 61.2 72 44.4
AUR62042260 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-07 60.8 71 42.3
Solyc10g018713.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.3e-07 60.8 96 33.3
vmacro21586 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 3.0e-07 60.5 90 37.8
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 4.0e-07 60.1 133 32.3
AUR62010806 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.0e-07 60.1 78 37.2
AUR62019804 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.0e-07 60.1 78 38.5
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.2e-07 59.7 81 39.5
AUR62029526 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.2e-07 59.7 52 50.0
AUR62040089 Chenopodium quinoa HOM05D001309 ORTHO05D000385 5.2e-07 59.7 94 41.5
AUR62022712 Chenopodium quinoa HOM05D009343 ORTHO05D000385 6.8e-07 59.3 71 38.0
AUR62028446 Chenopodium quinoa HOM05D009343 ORTHO05D011970 6.8e-07 59.3 71 39.4
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 6.8e-07 59.3 82 39.0
Hund03726 Selenicereus undatus HOM05D004615 ORTHO05D000385 6.8e-07 59.3 60 43.3
Solyc10g061845.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 6.8e-07 59.3 105 33.3
Thecc.02G018900 Theobroma cacao HOM05D005763 ORTHO05D005970 6.8e-07 59.3 176 29.0
AUR62012549 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.8e-07 58.9 127 29.1
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 8.8e-07 58.9 110 29.1
MBI12_g08677_MAGBIO Magnolia biondii HOM05D001510 ORTHO05D000385 1.2e-06 58.5 95 34.7
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 1.5e-06 58.2 72 43.1
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 1.5e-06 58.2 93 40.9
Sc08g0005540 Simmondsia chinensis HOM05D004615 ORTHO05D000385 1.5e-06 58.2 71 39.4
Sopen08g013620 Solanum pennellii HOM05D008041 ORTHO05D000385 1.5e-06 58.2 81 35.8
AUR62038216 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.0e-06 57.8 62 43.5
AUR62041975 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-06 57.8 53 45.3
Lj5A265G37 Lonicera japonica HOM05D005763 ORTHO05D005970 2.6e-06 57.4 84 42.9
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.6e-06 57.4 81 39.5
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.6e-06 57.4 81 39.5
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 3.4e-06 57.0 98 34.7
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 3.4e-06 57.0 77 36.4
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 3.4e-06 57.0 75 37.3
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 4.4e-06 56.6 98 37.8
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 5.7e-06 56.2 64 40.6
Solyc05g032825.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 7.5e-06 55.8 74 33.8
Sopen01g007430 Solanum pennellii HOM05D008041 ORTHO05D000385 7.5e-06 55.8 127 29.9
EL10As6g23645 Beta vulgaris HOM05D004615 ORTHO05D000385 9.8e-06 55.5 226 25.2
Sopen04g010730 Solanum pennellii HOM05D008041 ORTHO05D000385 9.8e-06 55.5 67 35.8


User provided reference genes

Program Settings