Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold119G32750 Striga asiatica HOM05D003654 ORTHO05D004176 1.0e-78 296.6 142 100.0
Oeu014591.1 Olea europaea HOM05D003654 ORTHO05D004176 3.5e-10 68.9 75 53.3
Gohir.D09G118500 Gossypium hirsutum HOM05D003654 ORTHO05D004176 4.5e-10 68.6 69 49.3
Gorai.006G136800 Gossypium raimondii HOM05D003654 ORTHO05D004176 5.9e-10 68.2 69 49.3
Gohir.A09G122400 Gossypium hirsutum HOM05D003654 ORTHO05D004176 7.8e-10 67.8 69 49.3
CsaV3_3G039380 Cucumis sativus L. HOM05D003654 ORTHO05D004176 1.3e-09 67.0 63 52.4
Potri.001G263404 Populus trichocarpa HOM05D003654 ORTHO05D004176 3.8e-09 65.5 47 63.8
Ciclev10006321m.g Citrus clementina HOM05D003654 ORTHO05D004176 5.0e-09 65.1 49 59.2
AUR62023084 Chenopodium quinoa HOM05D003654 ORTHO05D004176 8.6e-09 64.3 72 48.6
Actinidia19408 Actinidia chinensis HOM05D003654 ORTHO05D004176 1.5e-08 63.5 35 77.1
Sabra16G0161800 Salix brachista HOM05D003654 ORTHO05D004176 1.5e-08 63.5 33 81.8
SalBow5G4200 Salvia bowleyana HOM05D003654 ORTHO05D004176 1.5e-08 63.5 68 50.0
THA.LOC109117091 Tarenaya hassleriana HOM05D003654 ORTHO05D004176 1.9e-08 63.2 53 54.7
ClCG10G017020 Citrullus lanatus HOM05D003654 ORTHO05D004176 2.5e-08 62.8 40 70.0
Haze_19862 Corylus avellana HOM05D003654 ORTHO05D004176 3.3e-08 62.4 53 56.6
MBI17_g05505_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 4.3e-08 62.0 54 55.6
TAR633G1637 Trochodendron aralioides HOM05D003654 ORTHO05D004176 4.3e-08 62.0 37 73.0
Ah.10g038700 Amaranthus hybridus HOM05D003654 ORTHO05D004176 5.6e-08 61.6 42 59.5
Ciclev10033218m.g Citrus clementina HOM05D003654 ORTHO05D004176 5.6e-08 61.6 38 68.4
MELO3C009681.2 Cucumis melo HOM05D003654 ORTHO05D004176 5.6e-08 61.6 37 70.3
Gohir.D09G118550 Gossypium hirsutum HOM05D003654 ORTHO05D004176 7.3e-08 61.2 37 67.6
Gorai.006G136900 Gossypium raimondii HOM05D003654 ORTHO05D004176 7.3e-08 61.2 37 67.6
Lsat_1_v5_gn_9_28921 Lactuca sativa HOM05D003654 ORTHO05D004176 7.3e-08 61.2 33 78.8
Lsat_1_v5_gn_9_28941 Lactuca sativa HOM05D003654 ORTHO05D004176 7.3e-08 61.2 33 78.8
Atru.chr11.2594 Acer truncatum HOM05D003654 ORTHO05D004176 9.5e-08 60.8 34 76.5
CsaV3_7G030860 Cucumis sativus L. HOM05D003654 ORTHO05D004176 9.5e-08 60.8 37 70.3
Lsat_1_v5_gn_9_28881 Lactuca sativa HOM05D003654 ORTHO05D004176 9.5e-08 60.8 33 78.8
Sed0004161 Sechium edule HOM05D003654 ORTHO05D004176 9.5e-08 60.8 37 67.6
BcaC02g09939 Brassica carinata HOM05D003654 ORTHO05D004176 1.2e-07 60.5 38 65.8
C04p34970 Brassica napus HOM05D003654 ORTHO05D004176 1.2e-07 60.5 38 65.8
BolC4t25052H Brassica oleracea HOM05D003654 ORTHO05D004176 1.2e-07 60.5 38 65.8
Gohir.A11G312450 Gossypium hirsutum HOM05D003654 ORTHO05D004176 1.2e-07 60.5 40 62.5
Gohir.D11G328950 Gossypium hirsutum HOM05D003654 ORTHO05D004176 1.2e-07 60.5 40 62.5
Gorai.007G360300 Gossypium raimondii HOM05D003654 ORTHO05D004176 1.2e-07 60.5 40 62.5
Solyc01g087580.3 Solanum lycopersicum HOM05D003654 ORTHO05D004176 1.2e-07 60.5 42 61.9
CARHR167650 Cardamine hirsuta HOM05D003654 ORTHO05D004176 1.6e-07 60.1 33 75.8
CiPaw.09G037900 Carya illinoinensis HOM05D003654 ORTHO05D004176 1.6e-07 60.1 36 69.4
CDE11G0735 Ceratophyllum demersum HOM05D003654 ORTHO05D004176 1.6e-07 60.1 37 70.3
ClCG09G003960 Citrullus lanatus HOM05D003654 ORTHO05D004176 1.6e-07 60.1 37 67.6
MBI17_g39959_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 1.6e-07 60.1 49 59.2
Phvul.003G066700 Phaseolus vulgaris HOM05D003654 ORTHO05D004176 1.6e-07 60.1 40 62.5
Aqoxy7G00792 Aquilegia oxysepala HOM05D003654 ORTHO05D004176 2.1e-07 59.7 71 45.1
Thhalv10006420m.g Eutrema salsugineum HOM05D003654 ORTHO05D004176 2.1e-07 59.7 38 65.8
HanXRQChr03g0062211 Helianthus annuus HOM05D003654 ORTHO05D004176 2.1e-07 59.7 33 75.8
HanXRQChr03g0062221 Helianthus annuus HOM05D003654 ORTHO05D004176 2.1e-07 59.7 33 75.8
Lsat_1_v5_gn_9_28901 Lactuca sativa HOM05D003654 ORTHO05D004176 2.1e-07 59.7 34 70.6
MBI17_g18370_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 2.1e-07 59.7 38 68.4
Manes.10G139300 Manihot esculenta HOM05D003654 ORTHO05D004176 2.1e-07 59.7 37 67.6
Thecc.05G154000 Theobroma cacao HOM05D003654 ORTHO05D004176 2.1e-07 59.7 33 72.7
BraA07t30006Z Brassica rapa HOM05D003654 ORTHO05D004176 2.8e-07 59.3 32 75.0
Glyma.05G150100 Glycine max HOM05D003654 ORTHO05D004176 2.8e-07 59.3 38 65.8
Glyma.08G106900 Glycine max HOM05D003654 ORTHO05D004176 2.8e-07 59.3 38 65.8
Zm00001eb301890 Zea mays HOM05D003654 ORTHO05D004176 2.8e-07 59.3 33 72.7
ECA234G3018 Erigeron canadensis HOM05D007122 ORTHO05D008918 3.6e-07 58.9 39 69.2
Gohir.D08G164000 Gossypium hirsutum HOM05D003654 ORTHO05D004176 3.6e-07 58.9 37 64.9
Gorai.004G171000 Gossypium raimondii HOM05D003654 ORTHO05D004176 3.6e-07 58.9 37 64.9
Sc10g0000210 Simmondsia chinensis HOM05D003654 ORTHO05D004176 3.6e-07 58.9 47 55.3
EL10Ac2g04348 Beta vulgaris HOM05D003654 ORTHO05D004176 4.7e-07 58.5 71 42.3
Carub.0005s2429 Capsella rubella HOM05D003654 ORTHO05D004176 4.7e-07 58.5 38 65.8
DCAR_020491 Daucus carota HOM05D003654 ORTHO05D004176 4.7e-07 58.5 33 72.7
Lj9P638T60 Lonicera japonica HOM05D003654 ORTHO05D004176 4.7e-07 58.5 68 47.1
Nn1g05869 Nelumbo nucifera HOM05D003654 ORTHO05D004176 4.7e-07 58.5 82 37.8
Rhsim07G0057900 Rhododendron simsii HOM05D003654 ORTHO05D004176 4.7e-07 58.5 33 72.7
ATR0626G251 Amborella trichopoda HOM05D003654 ORTHO05D004176 6.1e-07 58.2 34 70.6
Eucgr.H02820 Eucalyptus grandis HOM05D003654 ORTHO05D004176 6.1e-07 58.2 37 67.6
Hma1.2p1_2266F.1_g318430 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 6.1e-07 58.2 33 72.7
Hma1.2p1_2266F.1_g318440 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 6.1e-07 58.2 33 72.7
Hma1.2p1_2266F.1_g318450 Hydrangea macrophylla HOM05D003654 ORTHO05D004176 6.1e-07 58.2 33 72.7
Nn2g15259 Nelumbo nucifera HOM05D003654 ORTHO05D004176 6.1e-07 58.2 33 78.8
Nn5g30179 Nelumbo nucifera HOM05D003654 ORTHO05D004176 6.1e-07 58.2 37 64.9
Nitab4.5_0006340g0010 Nicotiana tabacum HOM05D003654 ORTHO05D004176 6.1e-07 58.2 94 39.4
QL04p008848 Quercus lobata HOM05D003654 ORTHO05D004176 6.1e-07 58.2 32 71.9
Solyc04g015700.1 Solanum lycopersicum HOM05D003654 ORTHO05D004176 6.1e-07 58.2 33 72.7
Sopen04g007780 Solanum pennellii HOM05D003654 ORTHO05D004176 6.1e-07 58.2 33 72.7
AUR62009401 Chenopodium quinoa HOM05D003654 ORTHO05D004176 8.0e-07 57.8 73 45.2
MELO3C023573.2 Cucumis melo HOM05D003654 ORTHO05D004176 8.0e-07 57.8 32 75.0
MBI17_g45827_MAGBIO Magnolia biondii HOM05D003654 ORTHO05D004176 8.0e-07 57.8 33 75.8
Sp5g05150 Schrenkiella parvula HOM05D003654 ORTHO05D004176 8.0e-07 57.8 32 75.0
Sed0002974 Sechium edule HOM05D003654 ORTHO05D004176 8.0e-07 57.8 40 65.0
Sopen01g034550 Solanum pennellii HOM05D003654 ORTHO05D004176 8.0e-07 57.8 33 69.7
Atru.chr1.1088 Acer truncatum HOM05D003654 ORTHO05D004176 1.0e-06 57.4 33 69.7
Ca_08602_v3 Cicer arietinum L. HOM05D003654 ORTHO05D004176 1.0e-06 57.4 38 63.2
Cc06_g17070 Coffea canephora HOM05D003654 ORTHO05D004176 1.0e-06 57.4 33 72.7
Lsat_1_v5_gn_4_31200 Lactuca sativa HOM05D003654 ORTHO05D004176 1.0e-06 57.4 39 71.8
BcaC07g40377 Brassica carinata HOM05D003654 ORTHO05D004176 1.4e-06 57.0 38 63.2
BcaC07g40378 Brassica carinata HOM05D003654 ORTHO05D004176 1.4e-06 57.0 38 63.2
BcaC07g40382 Brassica carinata HOM05D003654 ORTHO05D004176 1.4e-06 57.0 38 63.2
C08p32930 Brassica napus HOM05D003654 ORTHO05D004176 1.4e-06 57.0 38 63.2
BolC8t50897H Brassica oleracea HOM05D003654 ORTHO05D004176 1.4e-06 57.0 38 63.2
BraA09t40486Z Brassica rapa HOM05D003654 ORTHO05D004176 1.4e-06 57.0 38 63.2
ECA248G2069 Erigeron canadensis HOM05D003654 ORTHO05D004176 1.4e-06 57.0 33 75.8
Peaxi162Scf00493g00002 Petunia axillaris HOM05D003654 ORTHO05D004176 1.4e-06 57.0 33 72.7
HPP92_012497 Vanilla planifolia HOM05D003654 ORTHO05D004176 1.4e-06 57.0 33 69.7
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 1.8e-06 56.6 53 50.9
Peaxi162Scf00071g01140 Petunia axillaris HOM05D003654 ORTHO05D004176 1.8e-06 56.6 33 69.7
QL07p000287 Quercus lobata HOM05D003654 ORTHO05D004176 1.8e-06 56.6 33 69.7
PGSC0003DMG400027273 Solanum tuberosum HOM05D003654 ORTHO05D004176 1.8e-06 56.6 33 69.7
Phvul.003G048800 Phaseolus vulgaris HOM05D003654 ORTHO05D004176 2.3e-06 56.2 40 62.5
Potri.016G055901 Populus trichocarpa HOM05D003654 ORTHO05D004176 2.3e-06 56.2 32 71.9
SEGI_17870 Sequoiadendron giganteum HOM05D003654 ORTHO05D004176 2.3e-06 56.2 33 69.7
Eucgr.A02353 Eucalyptus grandis HOM05D003654 ORTHO05D004176 3.0e-06 55.8 31 74.2
Gohir.A08G143100 Gossypium hirsutum HOM05D003654 ORTHO05D004176 3.0e-06 55.8 32 68.8
Solyc01g087570.2 Solanum lycopersicum HOM05D003654 ORTHO05D004176 3.0e-06 55.8 37 62.2
Sopen01g034540 Solanum pennellii HOM05D003654 ORTHO05D004176 3.0e-06 55.8 37 62.2
PGSC0003DMG400006788 Solanum tuberosum HOM05D003654 ORTHO05D004176 3.0e-06 55.8 33 66.7
PGSC0003DMG400006790 Solanum tuberosum HOM05D003654 ORTHO05D004176 3.0e-06 55.8 37 62.2
Atru.chr1.1086 Acer truncatum HOM05D003654 ORTHO05D004176 4.0e-06 55.5 62 45.2
Nn1g04367 Nelumbo nucifera HOM05D003654 ORTHO05D004176 4.0e-06 55.5 33 72.7
Nitab4.5_0006340g0020 Nicotiana tabacum HOM05D003654 ORTHO05D004176 4.0e-06 55.5 33 66.7
AL5G39020 Arabidopsis lyrata HOM05D003654 ORTHO05D004176 5.2e-06 55.1 31 71.0
CiPaw.13G007300 Carya illinoinensis HOM05D003654 ORTHO05D004176 5.2e-06 55.1 32 68.8
Nitab4.5_0000707g0220 Nicotiana tabacum HOM05D003654 ORTHO05D004176 5.2e-06 55.1 33 66.7
Atru.chr1.1087 Acer truncatum HOM05D003654 ORTHO05D004176 8.9e-06 54.3 33 63.6
CANSAT80G0428 Cannabis sativa HOM05D003654 ORTHO05D004176 8.9e-06 54.3 33 66.7
Cpa.g.c30295 Carica papaya HOM05D003654 ORTHO05D004176 8.9e-06 54.3 30 76.7
PGSC0003DMG400006789 Solanum tuberosum HOM05D003654 ORTHO05D004176 8.9e-06 54.3 33 63.6


User provided reference genes

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