Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold119G32726 Striga asiatica HOM05D005210 ORTHO05D010080 1.9e-113 412.5 206 100.0
SGA_v2.0_scaffold167G38415 Striga asiatica HOM05D005210 ORTHO05D010080 1.1e-94 350.1 206 85.9
MSTRG.20585 Avicennia marina HOM05D005210 ORTHO05D010080 1.1e-86 323.6 206 78.2
Migut.B01305 Erythranthe guttata HOM05D005210 ORTHO05D010080 1.2e-83 313.5 203 75.4
SalBow8G1406 Salvia bowleyana HOM05D005210 ORTHO05D010080 1.7e-74 283.1 203 69.5
unitig_750.g28447 Utricularia gibba HOM05D005210 ORTHO05D010080 1.4e-73 280.0 206 68.9
Oeu020894.1 Olea europaea HOM05D005210 ORTHO05D010080 7.2e-65 251.1 201 61.2
TPR.G32363 Trifolium pratense HOM05D005210 ORTHO05D010080 1.7e-50 203.4 201 50.2
Lsat_1_v5_gn_7_109460 Lactuca sativa HOM05D005210 ORTHO05D010080 1.1e-49 200.7 199 48.7
Medtr6g012880 Medicago truncatula HOM05D005210 ORTHO05D010080 1.2e-48 197.2 202 51.5
TPR.G22447 Trifolium pratense HOM05D005210 ORTHO05D010080 3.6e-48 195.7 202 47.5
Atru.chr1.3624 Acer truncatum HOM05D005210 ORTHO05D010080 6.1e-48 194.9 199 52.3
AUR62004733 Chenopodium quinoa HOM05D005210 ORTHO05D010080 5.2e-47 191.8 201 50.2
AUR62037526 Chenopodium quinoa HOM05D005210 ORTHO05D010080 5.2e-47 191.8 201 49.8
CANSAT78G1777 Cannabis sativa HOM05D005210 ORTHO05D010080 5.7e-46 188.3 198 50.0
Lj6g0026306 Lotus japonicus HOM05D005210 ORTHO05D010080 5.7e-46 188.3 200 49.0
Nitab4.5_0000299g0070 Nicotiana tabacum HOM05D005210 ORTHO05D010080 2.4e-44 183.0 199 48.2
Ciclev10012798m.g Citrus clementina HOM05D005210 ORTHO05D010080 2.2e-42 176.4 200 48.5
Aqoxy4G00327 Aquilegia oxysepala HOM05D005210 ORTHO05D010080 5.0e-42 175.3 203 47.8
ECA236G2402 Erigeron canadensis HOM05D005210 ORTHO05D010080 5.0e-42 175.3 200 44.0
Gohir.A10G200000 Gossypium hirsutum HOM05D005210 ORTHO05D010080 1.5e-41 173.7 210 49.0
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 4.2e-41 172.2 204 46.1
Gohir.A10G199900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 1.2e-40 170.6 212 48.6
Gorai.011G233600 Gossypium raimondii HOM05D005210 ORTHO05D010080 2.7e-40 169.5 210 48.6
CAN.G787.10 Capsicum annuum HOM05D005210 ORTHO05D010080 4.7e-40 168.7 205 48.3
DCAR_032434 Daucus carota HOM05D005210 ORTHO05D010080 4.7e-40 168.7 203 45.3
Gohir.D10G207900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 4.7e-40 168.7 210 48.1
Nn1g09997 Nelumbo nucifera HOM05D005210 ORTHO05D010080 6.1e-40 168.3 197 46.7
Nn1g10098 Nelumbo nucifera HOM05D005210 ORTHO05D010080 6.1e-40 168.3 197 46.7
Ah.03g133380 Amaranthus hybridus HOM05D005210 ORTHO05D010080 1.4e-39 167.2 200 44.5
Oeu061104.1 Olea europaea HOM05D000700 ORTHO05D010080 4.0e-39 165.6 137 56.9
PGR069G0003 Punica granatum HOM05D005210 ORTHO05D010080 5.2e-39 165.2 203 45.8
Phvul.005G088636 Phaseolus vulgaris HOM05D005210 ORTHO05D010080 4.8e-37 158.7 201 45.8
SEGI_01777 Sequoiadendron giganteum HOM05D005210 ORTHO05D010080 2.3e-34 149.8 219 39.3
Cfa023010 Carpinus fangiana HOM05D005210 ORTHO05D010080 5.0e-34 148.7 161 47.8
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 3.3e-33 146.0 177 44.6
Nitab4.5_0001761g0130 Nicotiana tabacum HOM05D005210 ORTHO05D010080 3.3e-33 146.0 163 46.6
Nitab4.5_0006085g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010080 4.2e-33 145.6 202 43.1
MBI04_g15069_MAGBIO Magnolia biondii HOM05D005210 ORTHO05D010080 2.8e-32 142.9 191 44.0
Potri.007G062102 Populus trichocarpa HOM05D005210 ORTHO05D010080 2.3e-31 139.8 220 42.7
Cpa.g.sc38.57 Carica papaya HOM05D005210 ORTHO05D010080 3.0e-31 139.4 182 44.5
Migut.B01023 Erythranthe guttata HOM05D005210 ORTHO05D010080 1.2e-30 137.5 179 47.5
Lalb_Chr03g0038991 Lupinus albus HOM05D005210 ORTHO05D010080 4.4e-30 135.6 158 47.5
CAN.G110.12 Capsicum annuum HOM05D005210 ORTHO05D010080 9.8e-30 134.4 145 51.0
Lalb_Chr02g0153671 Lupinus albus HOM05D005210 ORTHO05D010080 1.7e-29 133.7 188 42.0
VMungo0329G0007 Vigna mungo HOM05D005210 ORTHO05D010080 3.7e-29 132.5 188 41.0
CAN.G1109.4 Capsicum annuum HOM05D005210 ORTHO05D010080 1.8e-28 130.2 145 49.7
arahy.Tifrunner.gnm1.ann1.00SNP9 Arachis hypogaea HOM05D005210 ORTHO05D010080 3.1e-28 129.4 178 42.1
arahy.Tifrunner.gnm1.ann1.883WGW Arachis hypogaea HOM05D005210 ORTHO05D010080 3.1e-28 129.4 178 42.1
RcHm_v2.0_MTg0498311 Rosa chinensis HOM05D005210 ORTHO05D010080 2.7e-27 126.3 148 48.6
MELO3C028549.2 Cucumis melo HOM05D005210 ORTHO05D010080 4.5e-27 125.6 174 43.7
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 5.0e-26 122.1 169 42.0
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 6.6e-26 121.7 157 42.7
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 8.6e-26 121.3 104 54.8
Peaxi162Scf01267g00005 Petunia axillaris HOM05D005210 ORTHO05D010080 3.3e-25 119.4 118 49.2
RcHm_v2.0_Chr2g0148221 Rosa chinensis HOM05D005210 ORTHO05D010080 3.3e-25 119.4 114 50.9
Ca_15051_v3 Cicer arietinum L. HOM05D001750 ORTHO05D010080 2.8e-24 116.3 144 44.4
Nitab4.5_0003632g0030 Nicotiana tabacum HOM05D005210 ORTHO05D034847 1.4e-23 114.0 118 46.6
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.3e-21 107.5 171 39.2
PGSC0003DMG400020779 Solanum tuberosum HOM05D005210 ORTHO05D010080 2.2e-21 106.7 93 53.8
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 3.5e-19 99.4 135 41.5
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 3.5e-19 99.4 135 41.5
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 3.5e-19 99.4 135 41.5
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.1e-17 94.4 130 44.6
Hma1.2p1_0038F.1_g024120 Hydrangea macrophylla HOM05D005210 ORTHO05D010080 2.1e-16 90.1 73 57.5
RcHm_v2.0_Chr2g0148231 Rosa chinensis HOM05D005210 ORTHO05D010080 3.7e-13 79.3 81 55.6
Ciclev10017151m.g Citrus clementina HOM05D005210 ORTHO05D010080 2.4e-12 76.6 112 38.4
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 1.0e-10 71.2 99 41.4
Lalb_Chr17g0337341 Lupinus albus HOM05D005210 ORTHO05D010080 1.3e-10 70.9 60 51.7
Peaxi162Scf01462g00001 Petunia axillaris HOM05D005210 ORTHO05D010080 2.3e-10 70.1 100 42.0
Nitab4.5_0001152g0440 Nicotiana tabacum HOM05D005210 ORTHO05D010080 8.6e-10 68.2 61 47.5
Sed0004476 Sechium edule HOM05D005210 ORTHO05D010080 9.5e-09 64.7 92 40.2
QL04p020150 Quercus lobata HOM05D005210 ORTHO05D010080 1.6e-08 63.9 107 38.3
Lalb_Chr03g0038471 Lupinus albus HOM05D005210 ORTHO05D010080 3.4e-06 56.2 37 56.8


User provided reference genes

Program Settings