Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 4.2e-128 461.5 246 100.0
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 3.2e-51 206.1 453 37.3
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 1.4e-35 154.1 432 34.3
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 9.9e-29 131.3 111 64.0
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 1.3e-28 131.0 399 31.1
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 2.9e-28 129.8 129 58.9
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 3.8e-28 129.4 111 64.0
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 8.4e-28 128.3 129 58.1
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 8.4e-28 128.3 129 57.4
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 1.4e-27 127.5 112 62.5
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 1.4e-27 127.5 129 57.4
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 1.4e-27 127.5 129 57.4
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 1.9e-27 127.1 112 63.4
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 1.9e-27 127.1 205 45.9
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 4.2e-27 125.9 112 62.5
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 5.4e-27 125.6 403 30.3
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 7.1e-27 125.2 112 63.4
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 7.1e-27 125.2 112 61.6
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 9.3e-27 124.8 112 62.5
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 2.1e-26 123.6 112 60.7
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 2.1e-26 123.6 449 29.4
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 2.1e-26 123.6 187 44.9
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 2.1e-26 123.6 112 61.6
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 2.7e-26 123.2 112 61.6
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 3.5e-26 122.9 112 60.7
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 1.0e-25 121.3 104 61.5
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 1.0e-25 121.3 104 61.5
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 1.0e-25 121.3 196 42.9
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 1.3e-25 120.9 133 54.9
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 1.3e-25 120.9 112 59.8
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.3e-25 120.9 112 59.8
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.3e-25 120.9 112 59.8
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 5.1e-25 119.0 176 43.8
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 6.6e-25 118.6 110 58.2
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 6.6e-25 118.6 224 41.5
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 6.6e-25 118.6 132 53.8
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 8.7e-25 118.2 112 58.9
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.1e-24 117.9 470 28.5
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 1.5e-24 117.5 187 42.2
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 1.5e-24 117.5 180 42.8
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 1.9e-24 117.1 138 55.8
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 1.9e-24 117.1 132 53.0
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 2.5e-24 116.7 182 43.4
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 3.3e-24 116.3 113 59.3
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 5.6e-24 115.5 132 53.0
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 5.6e-24 115.5 185 45.9
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 7.3e-24 115.2 208 39.9
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 9.6e-24 114.8 107 56.1
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 9.6e-24 114.8 231 40.7
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 9.6e-24 114.8 185 43.2
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 2.1e-23 113.6 242 38.0
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.1e-23 113.6 252 39.7
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 2.8e-23 113.2 111 55.9
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 3.6e-23 112.8 152 48.7
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.1e-22 111.3 180 43.3
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 1.1e-22 111.3 168 42.3
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 3.1e-22 109.8 258 36.0
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 1.2e-21 107.8 97 56.7
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 4.5e-21 105.9 112 55.4
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 4.5e-21 105.9 199 41.2
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 4.9e-20 102.4 416 29.1
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 2.4e-19 100.1 112 50.9
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 4.2e-19 99.4 145 43.4
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 7.1e-19 98.6 248 36.3
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 1.2e-18 97.8 441 26.8
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 2.7e-18 96.7 116 51.7
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 4.6e-18 95.9 370 28.6
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 7.9e-18 95.1 78 62.8
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 3.9e-17 92.8 72 65.3
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 6.7e-17 92.0 240 35.0
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 8.7e-17 91.7 161 45.3
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 1.1e-16 91.3 112 46.4
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 1.5e-16 90.9 72 63.9
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.9e-16 90.5 298 31.2
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 1.9e-16 90.5 156 44.9
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 5.6e-16 89.0 150 43.3
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 5.6e-16 89.0 64 65.6
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 7.4e-16 88.6 148 42.6
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 1.3e-15 87.8 64 65.6
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 1.3e-15 87.8 64 65.6
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 1.3e-15 87.8 64 65.6
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 1.3e-15 87.8 64 65.6
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.6e-15 87.4 407 27.8
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 1.6e-15 87.4 72 62.5
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 1.6e-15 87.4 229 34.5
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 1.6e-15 87.4 64 67.2
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 1.6e-15 87.4 141 46.1
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 2.1e-15 87.0 407 27.8
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 2.1e-15 87.0 72 62.5
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 2.1e-15 87.0 93 53.8
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.6e-15 86.3 98 53.1
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 3.6e-15 86.3 65 63.1
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 8.1e-15 85.1 71 59.2
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 8.1e-15 85.1 71 59.2
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.1e-14 84.7 99 49.5
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 1.1e-14 84.7 142 46.5
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 1.8e-14 84.0 72 65.3
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 1.8e-14 84.0 121 43.8
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 1.8e-14 84.0 124 46.0
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 2.4e-14 83.6 105 46.7
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 2.4e-14 83.6 72 56.9
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 3.1e-14 83.2 147 43.5
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 3.1e-14 83.2 145 40.0
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 5.3e-14 82.4 72 55.6
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 5.3e-14 82.4 147 39.5
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 5.3e-14 82.4 66 60.6
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 5.3e-14 82.4 150 46.7
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 2.0e-13 80.5 88 53.4
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 2.0e-13 80.5 158 39.2
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 3.4e-13 79.7 132 40.9
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 4.5e-13 79.3 152 44.7
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 5.8e-13 79.0 121 43.0
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 5.8e-13 79.0 121 43.0
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 5.8e-13 79.0 71 56.3
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 7.6e-13 78.6 71 56.3
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 1.3e-12 77.8 71 54.9
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 2.9e-12 76.6 93 46.2
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 2.9e-12 76.6 185 37.8
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.8e-12 76.3 98 48.0
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 3.8e-12 76.3 72 58.3
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 6.4e-12 75.5 70 54.3
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.4e-11 74.3 214 31.8
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 7.1e-11 72.0 161 39.1
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 1.2e-10 71.2 149 40.3
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 2.7e-10 70.1 140 40.0
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 3.0e-09 66.6 114 36.8
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 3.3e-08 63.2 149 35.6


User provided reference genes

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