Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold119G32680 Striga asiatica HOM05D005143 ORTHO05D006404 1.4e-148 529.6 269 100.0
MSTRG.21781 Avicennia marina HOM05D005143 ORTHO05D006404 1.8e-87 326.6 269 63.2
Migut.N00060 Erythranthe guttata HOM05D005143 ORTHO05D006404 3.7e-85 318.9 261 62.5
SalBow5G4838 Salvia bowleyana HOM05D005143 ORTHO05D006404 1.3e-79 300.4 261 61.3
Dinv02072 Davidia involucrata HOM05D005143 ORTHO05D006404 2.1e-77 293.1 266 57.1
SGA_v2.0_scaffold91G28048 Striga asiatica HOM05D005143 ORTHO05D006404 2.0e-75 286.6 254 63.0
Dinv44320 Davidia involucrata HOM05D005143 ORTHO05D006404 4.5e-75 285.4 257 57.2
QL06p011304 Quercus lobata HOM05D005143 ORTHO05D006404 1.0e-74 284.3 225 61.8
Lj6A685T16 Lonicera japonica HOM05D005143 ORTHO05D006404 2.2e-74 283.1 264 58.0
Ciclev10007083m.g Citrus clementina HOM05D005143 ORTHO05D006404 3.8e-74 282.3 224 62.9
vmacro08077 Vaccinium macrocarpon HOM05D005143 ORTHO05D006404 8.5e-74 281.2 225 61.3
Hma1.2p1_0013F.1_g008930 Hydrangea macrophylla HOM05D005143 ORTHO05D006404 7.2e-73 278.1 247 58.7
Cc03_g01170 Coffea canephora HOM05D005143 ORTHO05D006404 1.6e-72 276.9 225 64.9
Cfa015478 Carpinus fangiana HOM05D005143 ORTHO05D006404 2.7e-72 276.2 252 57.1
Actinidia15583 Actinidia chinensis HOM05D005143 ORTHO05D006404 4.6e-72 275.4 225 59.6
Potri.008G108900 Populus trichocarpa HOM05D005143 ORTHO05D006404 7.9e-72 274.6 226 61.9
Potri.T170901 Populus trichocarpa HOM05D005143 ORTHO05D006404 7.9e-72 274.6 226 61.9
Potri.010G140400 Populus trichocarpa HOM05D005143 ORTHO05D006404 2.3e-71 273.1 224 60.3
Actinidia40351 Actinidia chinensis HOM05D005143 ORTHO05D006404 5.1e-71 271.9 225 59.1
Manes.15G007000 Manihot esculenta HOM05D005143 ORTHO05D006404 5.1e-71 271.9 251 55.4
Glyma.09G039500 Glycine max HOM05D005143 ORTHO05D006404 1.1e-70 270.8 225 60.0
Sabra10G0108500 Salix brachista HOM05D005143 ORTHO05D006404 1.1e-70 270.8 224 58.9
Medtr2g034880 Medicago truncatula HOM05D005143 ORTHO05D006404 2.5e-70 269.6 250 57.2
Haze_01089 Corylus avellana HOM05D005143 ORTHO05D006404 4.3e-70 268.9 252 55.2
DCAR_030483 Daucus carota HOM05D005143 ORTHO05D006404 5.7e-70 268.5 226 60.6
Sabra08G0082500 Salix brachista HOM05D005143 ORTHO05D006404 7.4e-70 268.1 224 59.8
Atru.chr4.2951 Acer truncatum HOM05D005143 ORTHO05D006404 2.2e-69 266.5 232 59.1
TPR.G27704 Trifolium pratense HOM05D005143 ORTHO05D006404 2.8e-69 266.2 251 56.2
Oeu016479.2 Olea europaea HOM05D005143 ORTHO05D006404 8.2e-69 264.6 225 62.2
EL10Ac3g04926 Beta vulgaris HOM05D005143 ORTHO05D006404 1.4e-68 263.8 229 57.6
Ca_01881_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 2.4e-68 263.1 225 59.1
Ca_01895_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 2.4e-68 263.1 225 59.1
Glyma.15G144700 Glycine max HOM05D005143 ORTHO05D006404 2.4e-68 263.1 225 59.6
Thhalv10005363m.g Eutrema salsugineum HOM05D005143 ORTHO05D006404 3.1e-68 262.7 251 55.4
GSVIVG01035046001 Vitis vinifera HOM05D005143 ORTHO05D006404 3.1e-68 262.7 225 58.2
Lalb_Chr20g0121021 Lupinus albus HOM05D005143 ORTHO05D006404 5.3e-68 261.9 272 52.2
CiPaw.01G142400 Carya illinoinensis HOM05D005143 ORTHO05D006404 6.9e-68 261.5 225 57.8
Sopen01g026590 Solanum pennellii HOM05D005143 ORTHO05D006404 6.9e-68 261.5 225 60.4
C02p57210 Brassica napus HOM05D005143 ORTHO05D006404 1.2e-67 260.8 251 55.4
PGSC0003DMG400014988 Solanum tuberosum HOM05D005143 ORTHO05D006404 1.2e-67 260.8 225 60.4
Duzib151G0017 Durio zibethinus HOM05D005143 ORTHO05D006404 1.5e-67 260.4 225 56.4
Phvul.009G253600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 1.5e-67 260.4 247 55.5
Psat1g158200 Pisum sativum HOM05D005143 ORTHO05D006404 1.5e-67 260.4 251 55.8
RcHm_v2.0_Chr4g0424271 Rosa chinensis HOM05D005143 ORTHO05D006404 2.0e-67 260.0 227 59.0
CSS0004405 Camellia sinensis var. sinensis HOM05D005143 ORTHO05D006404 2.6e-67 259.6 225 59.1
Sp2g19670 Schrenkiella parvula HOM05D005143 ORTHO05D006404 2.6e-67 259.6 251 55.4
Solyc01g060450.3 Solanum lycopersicum HOM05D005143 ORTHO05D006404 2.6e-67 259.6 225 59.6
Thecc.04G294800 Theobroma cacao HOM05D005143 ORTHO05D006404 4.5e-67 258.8 225 56.4
BcaC03g17714 Brassica carinata HOM05D005143 ORTHO05D006404 5.9e-67 258.5 251 55.0
A02p38010 Brassica napus HOM05D005143 ORTHO05D006404 5.9e-67 258.5 251 55.4
BolC2t11792H Brassica oleracea HOM05D005143 ORTHO05D006404 5.9e-67 258.5 251 55.0
BraA02t08785Z Brassica rapa HOM05D005143 ORTHO05D006404 5.9e-67 258.5 251 55.4
CARHR182240 Cardamine hirsuta HOM05D005143 ORTHO05D006404 5.9e-67 258.5 251 56.2
Lj6g0005650 Lotus japonicus HOM05D005143 ORTHO05D006404 5.9e-67 258.5 225 58.7
COL.COLO4_34676 Corchorus olitorius HOM05D005143 ORTHO05D006404 7.7e-67 258.1 225 56.0
Prupe.1G125800 Prunus persica HOM05D005143 ORTHO05D006404 7.7e-67 258.1 251 55.4
AL8G22960 Arabidopsis lyrata HOM05D005143 ORTHO05D006404 1.0e-66 257.7 251 55.8
AT5G49320 Arabidopsis thaliana HOM05D005143 ORTHO05D006404 1.0e-66 257.7 251 55.4
BcaB07g34148 Brassica carinata HOM05D005143 ORTHO05D006404 1.0e-66 257.7 251 55.4
arahy.Tifrunner.gnm1.ann1.UTG064 Arachis hypogaea HOM05D005143 ORTHO05D006404 1.3e-66 257.3 246 54.9
Glyma.17G031200 Glycine max HOM05D005143 ORTHO05D006404 1.7e-66 256.9 225 57.8
Lalb_Chr18g0058921 Lupinus albus HOM05D005143 ORTHO05D006404 1.7e-66 256.9 248 55.6
VMungo1309G2864 Vigna mungo HOM05D005143 ORTHO05D006404 1.7e-66 256.9 247 54.3
TAR362G0369 Trochodendron aralioides HOM05D005143 ORTHO05D006404 2.2e-66 256.5 225 56.0
ClCG05G006400 Citrullus lanatus HOM05D005143 ORTHO05D006404 6.5e-66 255.0 224 56.7
Sed0010751 Sechium edule HOM05D005143 ORTHO05D006404 6.5e-66 255.0 225 57.3
TWI09G1317 Tripterygium wilfordii HOM05D005143 ORTHO05D006404 6.5e-66 255.0 225 58.2
FAN12G3988 Fragaria x ananassa HOM05D005143 ORTHO05D006404 1.1e-65 254.2 227 57.7
CsaV3_3G015020 Cucumis sativus L. HOM05D005143 ORTHO05D006404 1.4e-65 253.8 224 57.1
Gohir.A10G168900 Gossypium hirsutum HOM05D005143 ORTHO05D006404 1.4e-65 253.8 225 54.7
Gohir.D10G175100 Gossypium hirsutum HOM05D005143 ORTHO05D006404 1.4e-65 253.8 225 54.7
Gorai.011G195900 Gossypium raimondii HOM05D005143 ORTHO05D006404 1.4e-65 253.8 225 54.7
FvH4_4g19280 Fragaria vesca HOM05D005143 ORTHO05D006404 2.5e-65 253.1 227 57.7
MELO3C006698.2 Cucumis melo HOM05D005143 ORTHO05D006404 5.5e-65 251.9 223 57.0
Phvul.003G110600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 7.2e-65 251.5 223 57.0
CAN.G1016.6 Capsicum annuum HOM05D005143 ORTHO05D006404 9.4e-65 251.1 225 58.7
Carub.0008s0919 Capsella rubella HOM05D005143 ORTHO05D006404 1.2e-64 250.8 246 54.9
BolC7t44512H Brassica oleracea HOM05D005143 ORTHO05D006404 2.7e-64 249.6 244 55.3
THA.LOC104818896 Tarenaya hassleriana HOM05D005143 ORTHO05D006404 2.7e-64 249.6 267 49.8
PGR031G1222 Punica granatum HOM05D005143 ORTHO05D006404 3.6e-64 249.2 243 55.1
Nitab4.5_0000169g0050 Nicotiana tabacum HOM05D005143 ORTHO05D006404 4.6e-64 248.8 225 58.7
C07p39840 Brassica napus HOM05D005143 ORTHO05D006404 6.1e-64 248.4 244 55.3
Sc25g0003440 Simmondsia chinensis HOM05D005143 ORTHO05D006404 6.1e-64 248.4 229 55.5
CiPaw.02G077100 Carya illinoinensis HOM05D005143 ORTHO05D006404 1.4e-63 247.3 225 55.6
AUR62035066 Chenopodium quinoa HOM05D005143 ORTHO05D006404 1.4e-63 247.3 271 49.1
DCAR_002501 Daucus carota HOM05D005143 ORTHO05D006404 1.4e-63 247.3 225 57.8
Nitab4.5_0001695g0020 Nicotiana tabacum HOM05D005143 ORTHO05D006404 1.8e-63 246.9 225 58.2
Duzib052G1152 Durio zibethinus HOM05D005143 ORTHO05D006404 6.7e-63 245.0 222 53.2
Eucgr.A00195 Eucalyptus grandis HOM05D005143 ORTHO05D006404 6.7e-63 245.0 227 56.8
VMungo1215G3234 Vigna mungo HOM05D005143 ORTHO05D006404 1.1e-62 244.2 240 53.3
BcaNung02596 Brassica carinata HOM05D005143 ORTHO05D006404 2.0e-62 243.4 244 54.9
Aa31LG11G7840 Aethionema arabicum HOM05D005143 ORTHO05D006404 2.6e-62 243.0 252 52.8
PSO210G3751 Papaver somniferum HOM05D005143 ORTHO05D006404 5.7e-62 241.9 228 55.3
PSO761G0512 Papaver somniferum HOM05D005143 ORTHO05D006404 1.3e-61 240.7 228 55.3
MD13G1158800 Malus domestica HOM05D005143 ORTHO05D006404 3.7e-61 239.2 227 55.5
MD16G1159000 Malus domestica HOM05D005143 ORTHO05D006404 1.1e-60 237.7 226 57.1
Ah.04g154920 Amaranthus hybridus HOM05D005143 ORTHO05D006404 2.4e-60 236.5 226 53.5
Aqoxy2G02819 Aquilegia oxysepala HOM05D005143 ORTHO05D006404 2.4e-60 236.5 226 53.1
Lsat_1_v5_gn_6_115260 Lactuca sativa HOM05D005143 ORTHO05D006404 3.1e-60 236.1 244 51.6
Hund02954 Selenicereus undatus HOM05D005143 ORTHO05D006404 9.1e-60 234.6 297 46.8
ECA246G2788 Erigeron canadensis HOM05D005143 ORTHO05D006404 1.5e-59 233.8 249 50.2
Cpa.g.sc9.99 Carica papaya HOM05D005143 ORTHO05D006404 1.1e-57 227.6 230 52.2
FAN07G0192 Fragaria x ananassa HOM05D005143 ORTHO05D006404 1.6e-56 223.8 200 58.5
CANSAT78G1129 Cannabis sativa HOM05D005143 ORTHO05D006404 2.3e-55 219.9 224 52.2
Sabra08G0082600 Salix brachista HOM05D005143 ORTHO05D006404 8.8e-55 218.0 224 50.4
Medtr2g034890 Medicago truncatula HOM05D005143 ORTHO05D006404 2.0e-54 216.9 226 52.2
Peaxi162Scf00065g00033 Petunia axillaris HOM05D005143 ORTHO05D006404 3.3e-54 216.1 270 46.7
Nn3g21616 Nelumbo nucifera HOM05D005143 ORTHO05D006404 9.7e-54 214.5 243 49.8
HanXRQChr03g0093441 Helianthus annuus HOM05D005143 ORTHO05D006404 1.4e-52 210.7 253 47.0
MBI19_g29991_MAGBIO Magnolia biondii HOM05D005143 ORTHO05D006404 9.1e-52 208.0 225 50.7
TPR.G27702 Trifolium pratense HOM05D005143 ORTHO05D006404 1.6e-51 207.2 253 47.4
arahy.Tifrunner.gnm1.ann1.PXPP98 Arachis hypogaea HOM05D005143 ORTHO05D006404 2.3e-47 193.4 189 52.9
Rhsim04G0232200 Rhododendron simsii HOM05D005143 ORTHO05D006404 3.0e-47 193.0 250 45.2
Lalb_Chr12g0200981 Lupinus albus HOM05D005143 ORTHO05D006404 4.0e-47 192.6 211 49.3
arahy.Tifrunner.gnm1.ann1.W9GTE1 Arachis hypogaea HOM05D005143 ORTHO05D006404 1.8e-44 183.7 217 47.5
Oeu006437.1 Olea europaea HOM05D005143 ORTHO05D006404 2.4e-44 183.3 134 66.4
arahy.Tifrunner.gnm1.ann1.RF9CFS Arachis hypogaea HOM05D005143 ORTHO05D006404 4.1e-44 182.6 217 47.5
CDE11G0634 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 5.0e-42 175.6 231 42.9
Carub.0008s0727 Capsella rubella HOM05D005143 ORTHO05D006404 2.5e-41 173.3 229 45.0
FAN12G2949 Fragaria x ananassa HOM05D005143 ORTHO05D006404 2.5e-41 173.3 174 52.9
TAR633G2465 Trochodendron aralioides HOM05D005143 ORTHO05D006404 1.4e-39 167.5 132 58.3
HPP92_001064 Vanilla planifolia HOM05D005143 ORTHO05D006404 8.3e-37 158.3 230 40.0
AUR62016151 Chenopodium quinoa HOM05D005143 ORTHO05D006404 5.5e-33 145.6 150 51.3
AagrBONN_evm.TU.Sc2ySwM_368.1032 Anthoceros agrestis HOM05D005143 ORTHO05D006404 4.7e-32 142.5 201 40.8
SEGI_27691 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 1.8e-31 140.6 231 34.6
SEGI_36016 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 4.0e-31 139.4 229 36.7
Nitab4.5_0000531g0070 Nicotiana tabacum HOM05D005143 ORTHO05D006404 6.8e-31 138.7 183 47.5
Nitab4.5_0008735g0010 Nicotiana tabacum HOM05D005143 ORTHO05D006404 7.5e-30 135.2 183 46.4
AUR62043573 Chenopodium quinoa HOM05D005143 ORTHO05D006404 2.2e-29 133.7 119 52.1
Zm00001eb127640 Zea mays HOM05D005143 ORTHO05D006404 1.1e-28 131.3 207 38.6
SEGI_03781 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 3.1e-28 129.8 231 32.5
ATR0706G251 Amborella trichopoda HOM05D005143 ORTHO05D006404 1.6e-27 127.5 237 35.4
CDE05G0725 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 2.0e-27 127.1 196 40.3
Hund11951 Selenicereus undatus HOM05D005143 ORTHO05D006404 1.0e-26 124.8 161 44.1
Nitab4.5_0005463g0090 Nicotiana tabacum HOM05D005143 ORTHO05D006404 3.0e-23 113.2 157 46.5
Os01g0253400 Oryza sativa ssp. japonica HOM05D005143 ORTHO05D006404 6.8e-23 112.1 212 35.4
Lj3C827T17 Lonicera japonica HOM05D005143 ORTHO05D006404 2.4e-12 77.0 74 58.1
arahy.Tifrunner.gnm1.ann1.T63ME6 Arachis hypogaea HOM05D005143 ORTHO05D006404 1.1e-09 68.2 77 50.6
CDE05G1990 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 7.3e-09 65.5 171 29.2
SMO118G0365 Selaginella moellendorffii HOM05D005143 ORTHO05D006404 3.4e-06 56.6 141 27.7
A06p38430 Brassica napus HOM05D005143 ORTHO05D006404 9.9e-06 55.1 85 40.0
BraA06t26757Z Brassica rapa HOM05D005143 ORTHO05D006404 9.9e-06 55.1 85 40.0


User provided reference genes

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