Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold119G32659 Striga asiatica HOM05D006322 ORTHO05D007716 2.6e-132 475.3 230 100.0
Migut.N00046 Erythranthe guttata HOM05D006322 ORTHO05D007716 2.5e-106 389.0 228 78.5
Oeu019970.1 Olea europaea HOM05D006322 ORTHO05D007716 1.4e-96 356.7 216 74.1
MSTRG.24817 Avicennia marina HOM05D006322 ORTHO05D007716 2.3e-96 355.9 214 75.2
Peaxi162Scf00244g00413 Petunia axillaris HOM05D006322 ORTHO05D007716 7.4e-95 350.9 226 70.8
PGSC0003DMG400027315 Solanum tuberosum HOM05D006322 ORTHO05D007716 9.7e-95 350.5 209 73.7
Solyc11g007570.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 1.3e-94 350.1 209 73.2
Sopen11g003410 Solanum pennellii HOM05D006322 ORTHO05D007716 1.3e-94 350.1 209 73.7
COL.COLO4_34636 Corchorus olitorius HOM05D006322 ORTHO05D007716 8.2e-94 347.4 226 69.5
Haze_01283 Corylus avellana HOM05D006322 ORTHO05D007716 2.4e-93 345.9 226 70.4
Nitab4.5_0001807g0060 Nicotiana tabacum HOM05D006322 ORTHO05D007716 7.0e-93 344.4 211 72.0
SalBow5G5236 Salvia bowleyana HOM05D006322 ORTHO05D007716 9.1e-93 344.0 211 73.0
QL06p011774 Quercus lobata HOM05D006322 ORTHO05D007716 2.0e-92 342.8 213 71.8
Cfa015332 Carpinus fangiana HOM05D006322 ORTHO05D007716 7.7e-92 340.9 226 69.5
Cc03_g00960 Coffea canephora HOM05D006322 ORTHO05D007716 6.5e-91 337.8 225 68.4
Thecc.04G298700 Theobroma cacao HOM05D006322 ORTHO05D007716 1.4e-90 336.7 226 67.3
PGR031G3552 Punica granatum HOM05D006322 ORTHO05D007716 9.4e-90 334.0 226 65.5
Glyma.17G032700 Glycine max HOM05D006322 ORTHO05D007716 1.2e-89 333.6 216 69.4
Eucgr.A00353 Eucalyptus grandis HOM05D006322 ORTHO05D007716 2.1e-89 332.8 226 66.8
Lju470A16T21 Lonicera japonica HOM05D006322 ORTHO05D007716 2.7e-89 332.4 210 71.4
Nitab4.5_0002259g0050 Nicotiana tabacum HOM05D006322 ORTHO05D007716 2.7e-89 332.4 209 70.3
Atru.chr4.3025 Acer truncatum HOM05D006322 ORTHO05D007716 4.7e-89 331.6 211 71.6
Ciclev10005751m.g Citrus clementina HOM05D006322 ORTHO05D007716 6.1e-89 331.3 236 66.9
MD16G1155500 Malus domestica HOM05D006322 ORTHO05D007716 6.1e-89 331.3 222 68.9
Medtr4g121940 Medicago truncatula HOM05D006322 ORTHO05D007716 1.4e-88 330.1 216 69.4
Manes.03G203000 Manihot esculenta HOM05D006322 ORTHO05D007716 1.8e-88 329.7 230 64.3
TAR636G2967 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.3e-88 329.3 210 70.5
Hma1.2p1_0078F.1_g040000 Hydrangea macrophylla HOM05D006322 ORTHO05D007716 3.0e-88 328.9 228 68.9
Actinidia40367 Actinidia chinensis HOM05D006322 ORTHO05D007716 5.2e-88 328.2 211 68.2
CiPaw.01G139400 Carya illinoinensis HOM05D006322 ORTHO05D007716 5.2e-88 328.2 212 69.8
Gohir.D09G235800 Gossypium hirsutum HOM05D006322 ORTHO05D007716 5.2e-88 328.2 214 68.7
Lalb_Chr13g0298441 Lupinus albus HOM05D006322 ORTHO05D007716 6.7e-88 327.8 214 67.8
Gohir.A09G235000 Gossypium hirsutum HOM05D006322 ORTHO05D007716 1.5e-87 326.6 212 68.9
CSS0012053 Camellia sinensis var. sinensis HOM05D006322 ORTHO05D007716 2.0e-87 326.2 210 69.5
Dinv44297 Davidia involucrata HOM05D006322 ORTHO05D007716 2.6e-87 325.9 195 75.9
Duzib052G0456 Durio zibethinus HOM05D006322 ORTHO05D007716 3.3e-87 325.5 210 70.0
Gorai.006G258900 Gossypium raimondii HOM05D006322 ORTHO05D007716 4.4e-87 325.1 214 67.8
RcHm_v2.0_Chr4g0424801 Rosa chinensis HOM05D006322 ORTHO05D007716 4.4e-87 325.1 227 65.2
arahy.Tifrunner.gnm1.ann1.WPA2XH Arachis hypogaea HOM05D006322 ORTHO05D007716 1.7e-86 323.2 216 67.1
ECA233G0552 Erigeron canadensis HOM05D006322 ORTHO05D007716 1.7e-86 323.2 213 67.1
FAN07G2163 Fragaria x ananassa HOM05D006322 ORTHO05D007716 1.7e-86 323.2 211 68.7
Duzib151G0960 Durio zibethinus HOM05D006322 ORTHO05D007716 2.8e-86 322.4 212 68.4
Aqoxy2G02768 Aquilegia oxysepala HOM05D006322 ORTHO05D007716 3.7e-86 322.0 210 71.0
Phvul.003G113400 Phaseolus vulgaris HOM05D006322 ORTHO05D007716 6.3e-86 321.2 215 65.6
VMungo1215G3118 Vigna mungo HOM05D006322 ORTHO05D007716 8.2e-86 320.9 215 66.5
TWI09G0431 Tripterygium wilfordii HOM05D006322 ORTHO05D007716 1.4e-85 320.1 212 67.9
arahy.Tifrunner.gnm1.ann1.57P81C Arachis hypogaea HOM05D006322 ORTHO05D007716 1.8e-85 319.7 216 66.2
HanXRQChr13g0395571 Helianthus annuus HOM05D006322 ORTHO05D007716 1.8e-85 319.7 211 66.4
Prupe.1G119400 Prunus persica HOM05D006322 ORTHO05D007716 1.8e-85 319.7 236 61.9
GSVIVG01035010001 Vitis vinifera HOM05D006322 ORTHO05D007716 3.5e-84 315.5 203 70.0
CANSAT78G1173 Cannabis sativa HOM05D006322 ORTHO05D007716 4.5e-84 315.1 212 67.0
Lj4g0019910 Lotus japonicus HOM05D006322 ORTHO05D007716 4.5e-84 315.1 215 67.4
Cpa.g.sc9.74 Carica papaya HOM05D006322 ORTHO05D007716 1.5e-82 310.1 211 66.4
Psat4g024200 Pisum sativum HOM05D006322 ORTHO05D007716 2.5e-82 309.3 213 66.2
PSO357G0527 Papaver somniferum HOM05D006322 ORTHO05D007716 9.4e-82 307.4 213 64.3
Psat4g024280 Pisum sativum HOM05D006322 ORTHO05D007716 2.1e-81 306.2 215 64.2
Lsat_1_v5_gn_6_16821 Lactuca sativa HOM05D006322 ORTHO05D007716 8.0e-81 304.3 230 60.4
DCAR_027007 Daucus carota HOM05D006322 ORTHO05D007716 1.8e-80 303.1 272 54.4
Nn3g21692 Nelumbo nucifera HOM05D006322 ORTHO05D007716 2.3e-80 302.8 208 65.4
PSO170G6693 Papaver somniferum HOM05D006322 ORTHO05D007716 4.0e-80 302.0 212 64.2
EL10Ac3g05469 Beta vulgaris HOM05D006322 ORTHO05D007716 6.7e-80 301.2 210 64.8
CsaV3_6G022370 Cucumis sativus L. HOM05D006322 ORTHO05D007716 8.8e-80 300.8 216 63.9
Ca_21447_v3 Cicer arietinum L. HOM05D006322 ORTHO05D007716 1.5e-79 300.1 212 66.0
MBI19_g07237_MAGBIO Magnolia biondii HOM05D006322 ORTHO05D007716 3.3e-79 298.9 209 66.0
vmacro08057 Vaccinium macrocarpon HOM05D006322 ORTHO05D007716 5.7e-79 298.1 213 63.4
Hund11963 Selenicereus undatus HOM05D006322 ORTHO05D007716 9.7e-79 297.4 213 62.4
Aa31LG8G4030 Aethionema arabicum HOM05D006322 ORTHO05D007716 2.2e-78 296.2 223 60.5
Potri.008G106600 Populus trichocarpa HOM05D006322 ORTHO05D007716 2.8e-78 295.8 210 62.4
Sc25g0003310 Simmondsia chinensis HOM05D006322 ORTHO05D007716 4.8e-78 295.0 212 60.4
Sabra08G0080400 Salix brachista HOM05D006322 ORTHO05D007716 8.2e-78 294.3 211 60.2
MELO3C021273.2 Cucumis melo HOM05D006322 ORTHO05D007716 1.4e-77 293.5 218 62.8
Carub.0003s1674 Capsella rubella HOM05D006322 ORTHO05D007716 4.1e-77 292.0 211 61.6
Rhsim04G0234900 Rhododendron simsii HOM05D006322 ORTHO05D007716 7.0e-77 291.2 220 60.0
Thhalv10021446m.g Eutrema salsugineum HOM05D006322 ORTHO05D007716 1.2e-76 290.4 211 60.7
FAN12G2263 Fragaria x ananassa HOM05D006322 ORTHO05D007716 3.5e-76 288.9 197 66.5
DCAR_030477 Daucus carota HOM05D006322 ORTHO05D007716 4.5e-76 288.5 230 58.3
CARHR092240 Cardamine hirsuta HOM05D006322 ORTHO05D007716 1.3e-75 287.0 211 60.7
Sed0017771 Sechium edule HOM05D006322 ORTHO05D007716 2.2e-75 286.2 221 59.3
AL3G29970 Arabidopsis lyrata HOM05D006322 ORTHO05D007716 2.9e-75 285.8 211 60.2
ClCG06G004620 Citrullus lanatus HOM05D006322 ORTHO05D007716 2.9e-75 285.8 212 61.3
BraA03t13148Z Brassica rapa HOM05D006322 ORTHO05D007716 5.0e-75 285.0 211 59.7
C03p48530 Brassica napus HOM05D006322 ORTHO05D007716 8.5e-75 284.3 226 56.6
CAN.G135.71 Capsicum annuum HOM05D006322 ORTHO05D007716 8.5e-75 284.3 174 71.3
A03p40000 Brassica napus HOM05D006322 ORTHO05D007716 1.5e-74 283.5 211 59.7
BcaB04g18916 Brassica carinata HOM05D006322 ORTHO05D007716 2.5e-74 282.7 226 56.2
BcaC01g03797 Brassica carinata HOM05D006322 ORTHO05D007716 2.5e-74 282.7 226 56.2
BolC3t17131H Brassica oleracea HOM05D006322 ORTHO05D007716 2.5e-74 282.7 226 56.2
AT3G16990 Arabidopsis thaliana HOM05D006322 ORTHO05D007716 7.2e-74 281.2 211 59.7
Sp3g15210 Schrenkiella parvula HOM05D006322 ORTHO05D007716 3.6e-73 278.9 211 57.8
ATR0796G257 Amborella trichopoda HOM05D006322 ORTHO05D007716 4.7e-73 278.5 212 60.4
HPP92_001241 Vanilla planifolia HOM05D006322 ORTHO05D007716 1.4e-72 276.9 211 62.1
Os03g0306900 Oryza sativa ssp. japonica HOM05D006322 ORTHO05D007716 2.3e-72 276.2 211 59.7
Zm00001eb396140 Zea mays HOM05D006322 ORTHO05D007716 1.7e-70 270.0 216 56.9
BcaB04g18918 Brassica carinata HOM05D006322 ORTHO05D007716 8.6e-67 257.7 226 52.7
FvH4_4g19550 Fragaria vesca HOM05D006322 ORTHO05D007716 3.3e-66 255.8 180 64.4
SEGI_24166 Sequoiadendron giganteum HOM05D006322 ORTHO05D007716 9.5e-66 254.2 211 58.3
Peaxi162Scf00244g00510 Petunia axillaris HOM05D006322 ORTHO05D007716 2.1e-65 253.1 224 52.2
AUR62041396 Chenopodium quinoa HOM05D006322 ORTHO05D007716 2.3e-64 249.6 173 64.7
SHI00180 Sapria himalayana HOM05D006322 ORTHO05D007716 1.7e-62 243.4 263 45.6
AUR62016124 Chenopodium quinoa HOM05D006322 ORTHO05D007716 2.2e-62 243.0 172 63.4
Ah.13g071980 Amaranthus hybridus HOM05D006322 ORTHO05D007716 1.0e-59 234.2 204 54.9
Solyc11g007560.2 Solanum lycopersicum HOM05D006322 ORTHO05D007716 2.3e-59 233.0 214 49.1
CAN.G135.72 Capsicum annuum HOM05D006322 ORTHO05D007716 3.9e-59 232.3 213 49.8
Actinidia27045 Actinidia chinensis HOM05D006322 ORTHO05D007716 4.3e-58 228.8 153 65.4
THA.LOC104802603 Tarenaya hassleriana HOM05D006322 ORTHO05D007716 1.2e-57 227.3 174 55.7
Mapoly0003s0261 Marchantia polymorpha HOM05D006322 ORTHO05D007716 2.0e-55 219.9 211 47.9
TAR362G0340 Trochodendron aralioides HOM05D006322 ORTHO05D007716 2.6e-55 219.5 211 51.7
TPR.G20694 Trifolium pratense HOM05D006322 ORTHO05D007716 6.4e-54 214.9 158 61.4
SMO116G0484 Selaginella moellendorffii HOM05D006322 ORTHO05D007716 2.4e-53 213.0 210 47.6
Nitab4.5_0001807g0070 Nicotiana tabacum HOM05D006322 ORTHO05D007716 3.5e-52 209.1 205 47.3
Pp3c10_15580 Physcomitrium patens HOM05D006322 ORTHO05D007716 1.9e-50 203.4 211 47.4
EL10Ac7g16563 Beta vulgaris HOM05D006322 ORTHO05D007716 9.5e-50 201.1 155 59.4
AagrBONN_evm.TU.Sc2ySwM_117.1930 Anthoceros agrestis HOM05D006322 ORTHO05D007716 1.6e-49 200.3 212 46.7
BcaB04g18915 Brassica carinata HOM05D001503 ORTHO05D003820 5.4e-45 185.3 176 49.4
Lalb_Chr20g0120881 Lupinus albus HOM05D006322 ORTHO05D007716 1.6e-44 183.7 141 58.9
PGSC0003DMG400040588 Solanum tuberosum HOM05D006322 ORTHO05D007716 1.9e-42 176.8 161 51.6
Actinidia15599 Actinidia chinensis HOM05D006322 ORTHO05D007716 3.6e-41 172.6 113 65.5
Glyma.07G240701 Glycine max HOM05D006322 ORTHO05D007716 1.9e-29 133.7 112 54.5
CBR_g45493 Chara braunii HOM05D006322 ORTHO05D007716 1.7e-27 127.1 219 30.6
Atru.chr4.3023 Acer truncatum HOM05D006322 ORTHO05D007716 6.6e-27 125.2 82 65.9
Cre09.g407600 Chlamydomonas reinhardtii HOM05D006322 ORTHO05D007716 5.8e-23 112.1 221 32.1
EL10Ac9g22265 Beta vulgaris HOM05D006322 ORTHO05D007716 2.4e-21 106.7 92 52.2
EL10Ac1g02106 Beta vulgaris HOM05D006322 ORTHO05D007716 5.4e-13 79.0 56 60.7
CANSAT54G0480 Cannabis sativa HOM05D006322 ORTHO05D007716 6.0e-12 75.5 71 47.9
Atru.chr4.2979 Acer truncatum HOM05D006322 ORTHO05D007716 5.1e-11 72.4 43 67.4
CBR_g56708 Chara braunii HOM05D009436 ORTHO05D000048 8.7e-11 71.6 118 30.5
BcaB04g18920 Brassica carinata HOM05D006322 ORTHO05D007716 3.7e-09 66.2 56 46.4
Lalb_Chr20g0120891 Lupinus albus HOM05D006322 ORTHO05D007716 4.5e-07 59.3 38 63.2
PSO782G2289 Papaver somniferum HOM05D000256 ORTHO05D000119 1.7e-06 57.4 50 40.0


User provided reference genes

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