Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32636 Striga asiatica HOM05D006511 ORTHO05D007567 1.2e-150 536.6 282 100.0
Migut.C01397 Erythranthe guttata HOM05D006511 ORTHO05D007567 5.0e-85 318.5 282 61.3
SalBow7G4276 Salvia bowleyana HOM05D006511 ORTHO05D007567 4.9e-80 302.0 328 54.6
FAN19G0686 Fragaria x ananassa HOM05D006511 ORTHO05D007567 1.9e-63 246.9 284 49.3
Dinv22148 Davidia involucrata HOM05D006511 ORTHO05D007567 1.2e-62 244.2 286 47.9
CSS0025861 Camellia sinensis var. sinensis HOM05D006511 ORTHO05D007567 2.7e-62 243.0 281 49.5
HanXRQChr04g0102481 Helianthus annuus HOM05D006511 ORTHO05D007567 4.6e-62 242.3 280 47.5
FAN24G0692 Fragaria x ananassa HOM05D006511 ORTHO05D007567 6.0e-62 241.9 284 48.6
FvH4_2g00330 Fragaria vesca HOM05D006511 ORTHO05D007567 1.0e-61 241.1 284 48.2
RcHm_v2.0_Chr6g0249621 Rosa chinensis HOM05D006511 ORTHO05D007567 3.9e-61 239.2 285 47.7
QL09p001374 Quercus lobata HOM05D006511 ORTHO05D007567 6.6e-61 238.4 284 49.6
CiPaw.03G012800 Carya illinoinensis HOM05D006511 ORTHO05D007567 1.1e-60 237.7 284 48.9
DCAR_014062 Daucus carota HOM05D006511 ORTHO05D007567 5.6e-60 235.3 282 47.5
HanXRQChr04g0102471 Helianthus annuus HOM05D006511 ORTHO05D007567 4.7e-59 232.3 274 46.7
Manes.18G109250 Manihot esculenta HOM05D006511 ORTHO05D007567 4.7e-59 232.3 284 47.9
Lsat_1_v5_gn_1_24541 Lactuca sativa HOM05D006511 ORTHO05D007567 1.4e-58 230.7 279 47.0
Actinidia29367 Actinidia chinensis HOM05D006511 ORTHO05D007567 2.3e-58 229.9 282 47.2
Potri.013G095400 Populus trichocarpa HOM05D006511 ORTHO05D007567 4.0e-58 229.2 286 46.5
ECA247G1184 Erigeron canadensis HOM05D006511 ORTHO05D007567 1.5e-57 227.3 282 46.1
MD05G1006300 Malus domestica HOM05D006511 ORTHO05D007567 2.0e-57 226.9 278 48.9
FAN20G0885 Fragaria x ananassa HOM05D006511 ORTHO05D007567 5.8e-57 225.3 291 45.7
Sabra13G0081400 Salix brachista HOM05D006511 ORTHO05D007567 1.7e-56 223.8 285 46.0
Thecc.08G168400 Theobroma cacao HOM05D006511 ORTHO05D007567 2.2e-56 223.4 283 45.6
Sed0008597 Sechium edule HOM05D006511 ORTHO05D007567 3.7e-56 222.6 292 44.5
TWI12G0802 Tripterygium wilfordii HOM05D006511 ORTHO05D007567 1.1e-55 221.1 265 50.9
TAR636G2957 Trochodendron aralioides HOM05D006511 ORTHO05D007567 5.4e-55 218.8 281 45.9
Sc01g0000050 Simmondsia chinensis HOM05D006511 ORTHO05D007567 2.1e-54 216.9 288 42.4
Gohir.D08G249200 Gossypium hirsutum HOM05D006511 ORTHO05D007567 2.3e-53 213.4 280 42.1
Gorai.004G265800 Gossypium raimondii HOM05D006511 ORTHO05D007567 3.9e-53 212.6 280 42.1
Psat7g227400 Pisum sativum HOM05D006511 ORTHO05D007567 3.9e-53 212.6 288 41.0
THA.LOC104815798 Tarenaya hassleriana HOM05D006511 ORTHO05D007567 5.1e-53 212.2 277 44.4
Hund17299 Selenicereus undatus HOM05D006511 ORTHO05D007567 1.1e-52 211.1 285 43.5
Sopen11g020540 Solanum pennellii HOM05D006511 ORTHO05D007567 1.9e-52 210.3 281 43.1
PSO384G4286 Papaver somniferum HOM05D006511 ORTHO05D007567 3.3e-52 209.5 285 43.2
Solyc11g045100.2 Solanum lycopersicum HOM05D006511 ORTHO05D007567 7.3e-52 208.4 283 42.0
AT1G33500 Arabidopsis thaliana HOM05D006511 ORTHO05D007567 2.1e-51 206.8 280 44.6
Nn5g27238 Nelumbo nucifera HOM05D006511 ORTHO05D007567 2.1e-51 206.8 289 42.2
Carub.0001s3169 Capsella rubella HOM05D006511 ORTHO05D007567 2.8e-51 206.5 281 44.5
Prupe.8G003600 Prunus persica HOM05D006511 ORTHO05D007567 2.8e-51 206.5 272 45.2
Phvul.011G215700 Phaseolus vulgaris HOM05D006511 ORTHO05D007567 3.6e-51 206.1 291 41.9
CARHR032940 Cardamine hirsuta HOM05D006511 ORTHO05D007567 1.1e-50 204.5 279 43.7
BcaB03g13696 Brassica carinata HOM05D006511 ORTHO05D007567 2.3e-50 203.4 279 45.5
BcaC05g27802 Brassica carinata HOM05D006511 ORTHO05D007567 3.1e-50 203.0 279 43.7
Sp1g28980 Schrenkiella parvula HOM05D006511 ORTHO05D007567 1.5e-49 200.7 280 42.9
TPR.G34175 Trifolium pratense HOM05D006511 ORTHO05D007567 2.0e-49 200.3 288 41.3
CANSAT56G0749 Cannabis sativa HOM05D006511 ORTHO05D007567 1.3e-48 197.6 286 41.6
Rhsim02G0172300 Rhododendron simsii HOM05D006511 ORTHO05D007567 2.9e-48 196.4 269 45.7
BraA05t21311Z Brassica rapa HOM05D006511 ORTHO05D007567 1.4e-47 194.1 294 41.8
PGSC0003DMG401019059 Solanum tuberosum HOM05D006511 ORTHO05D007567 4.1e-47 192.6 264 42.0
VMungo1127G0740 Vigna mungo HOM05D006511 ORTHO05D007567 5.4e-47 192.2 324 38.0
unitig_749.g13868 Utricularia gibba HOM05D006511 ORTHO05D007567 2.1e-46 190.3 275 46.5
BolC5t32531H Brassica oleracea HOM05D006511 ORTHO05D007567 3.5e-46 189.5 304 40.1
C05p38000 Brassica napus HOM05D006511 ORTHO05D007567 4.6e-46 189.1 304 40.1
Cfa008039 Carpinus fangiana HOM05D006511 ORTHO05D007567 1.3e-45 187.6 286 40.9
Glyma.12G241400 Glycine max HOM05D006511 ORTHO05D007567 5.1e-45 185.7 265 41.1
Gohir.A08G228900 Gossypium hirsutum HOM05D006511 ORTHO05D007567 4.3e-44 182.6 279 39.4
AUR62038542 Chenopodium quinoa HOM05D006511 ORTHO05D007567 9.6e-44 181.4 262 41.2
Lj3g0014137 Lotus japonicus HOM05D006511 ORTHO05D007567 9.6e-44 181.4 287 39.4
Aa31LG6G7970 Aethionema arabicum HOM05D006511 ORTHO05D007567 1.6e-43 180.6 309 39.5
arahy.Tifrunner.gnm1.ann1.HN79E8 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.6e-43 180.6 333 36.0
ClCG11G008290 Citrullus lanatus HOM05D006511 ORTHO05D007567 1.6e-43 180.6 349 36.1
MBI15_g27824_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 1.8e-42 177.2 281 39.9
MELO3C008102.2 Cucumis melo HOM05D006511 ORTHO05D007567 3.1e-42 176.4 285 39.6
Ca_13616_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.2e-41 174.5 299 38.1
Ca_30187_v3 Cicer arietinum L. HOM05D006511 ORTHO05D007567 1.2e-41 174.5 299 38.1
MSTRG.1607 Avicennia marina HOM05D006511 ORTHO05D007567 2.0e-41 173.7 193 53.9
MBI15_g27821_MAGBIO Magnolia biondii HOM05D006511 ORTHO05D007567 2.9e-40 169.9 281 38.1
FvH4_2g04930 Fragaria vesca HOM05D006511 ORTHO05D007567 8.7e-37 158.3 224 43.3
Haze_13990 Corylus avellana HOM05D006511 ORTHO05D007567 1.1e-36 157.9 266 39.5
Thhalv10008295m.g Eutrema salsugineum HOM05D006511 ORTHO05D007567 1.9e-36 157.1 316 36.1
CsaV3_2G033310 Cucumis sativus L. HOM05D006511 ORTHO05D007567 2.5e-36 156.8 291 36.8
FAN24G3334 Fragaria x ananassa HOM05D006511 ORTHO05D007567 3.3e-36 156.4 224 44.6
Hma1.2p1_1405F.1_g281380 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 9.6e-36 154.8 133 60.9
EL10Ac1g01283 Beta vulgaris HOM05D006511 ORTHO05D007567 3.6e-35 152.9 278 36.7
HPP92_003819 Vanilla planifolia HOM05D006511 ORTHO05D007567 1.4e-34 151.0 279 32.6
FAN20G1821 Fragaria x ananassa HOM05D006511 ORTHO05D007567 4.0e-34 149.4 213 45.1
Cc10_g16070 Coffea canephora HOM05D006511 ORTHO05D007567 1.3e-32 144.4 207 42.5
Aqoxy6G00041 Aquilegia oxysepala HOM05D006511 ORTHO05D007567 1.1e-31 141.4 279 35.1
COL.COLO4_05044 Corchorus olitorius HOM05D006511 ORTHO05D007567 4.2e-31 139.4 209 40.7
CDE10G1127 Ceratophyllum demersum HOM05D006511 ORTHO05D007567 1.6e-30 137.5 277 35.4
PGR004G0115 Punica granatum HOM05D006511 ORTHO05D007567 1.6e-30 137.5 245 38.0
Atru.chr13.2578 Acer truncatum HOM05D006511 ORTHO05D007567 1.7e-29 134.0 279 35.5
Eucgr.F04079 Eucalyptus grandis HOM05D006511 ORTHO05D007567 3.9e-29 132.9 125 58.4
Sc01g0000180 Simmondsia chinensis HOM05D006511 ORTHO05D007567 3.9e-29 132.9 128 55.5
Peaxi162Scf00078g01026 Petunia axillaris HOM05D006511 ORTHO05D007567 1.5e-28 131.0 285 31.9
Ah.13g067720 Amaranthus hybridus HOM05D006511 ORTHO05D007567 3.3e-28 129.8 255 34.5
Ciclev10023919m.g Citrus clementina HOM05D006511 ORTHO05D007567 7.4e-28 128.6 142 53.5
Medtr1g067720 Medicago truncatula HOM05D006511 ORTHO05D007567 7.4e-28 128.6 148 48.6
AL1G47890 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 1.3e-27 127.9 200 41.5
Lj8A308G12 Lonicera japonica HOM05D006511 ORTHO05D007567 4.8e-27 125.9 261 36.4
AUR62013391 Chenopodium quinoa HOM05D006511 ORTHO05D007567 1.1e-26 124.8 238 35.3
arahy.Tifrunner.gnm1.ann1.VJ45CS Arachis hypogaea HOM05D006511 ORTHO05D007567 1.8e-26 124.0 128 50.8
Nitab4.5_0001489g0030 Nicotiana tabacum HOM05D006511 ORTHO05D007567 4.0e-26 122.9 261 34.9
Zm00001eb028220 Zea mays HOM05D006511 ORTHO05D007567 1.2e-25 121.3 234 35.9
COL.COLO4_05796 Corchorus olitorius HOM05D006511 ORTHO05D007567 1.3e-24 117.9 343 32.7
Nitab4.5_0000009g0490 Nicotiana tabacum HOM05D006511 ORTHO05D007567 5.5e-23 112.5 281 31.0
Os08g0320300 Oryza sativa ssp. japonica HOM05D006511 ORTHO05D007567 7.9e-22 108.6 152 40.1
Hma1.2p1_1476F.1_g285820 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 1.0e-21 108.2 165 40.0
ATR1204G001 Amborella trichopoda HOM05D006511 ORTHO05D007567 2.3e-21 107.1 193 34.2
Lalb_Chr19g0131901 Lupinus albus HOM05D006511 ORTHO05D007567 8.1e-19 98.6 104 44.2
AL1G48040 Arabidopsis lyrata HOM05D006511 ORTHO05D007567 1.1e-18 98.2 98 52.0
Haze_13992 Corylus avellana HOM05D006511 ORTHO05D007567 5.3e-18 95.9 81 61.7
Sc01g0000190 Simmondsia chinensis HOM05D006511 ORTHO05D007567 1.5e-17 94.4 101 44.6
Medtr1g067710 Medicago truncatula HOM05D006511 ORTHO05D007567 7.6e-17 92.0 102 43.1
Cpa.g.sc142.8 Carica papaya HOM05D006511 ORTHO05D007567 8.4e-16 88.6 209 30.6
arahy.Tifrunner.gnm1.ann1.FKD4F4 Arachis hypogaea HOM05D006511 ORTHO05D007567 1.4e-15 87.8 104 43.3
Ciclev10023084m.g Citrus clementina HOM05D006511 ORTHO05D007567 1.4e-15 87.8 99 47.5
Eucgr.F04078 Eucalyptus grandis HOM05D006511 ORTHO05D007567 1.9e-15 87.4 98 43.9
vmacro11027 Vaccinium macrocarpon HOM05D006511 ORTHO05D007567 1.2e-14 84.7 159 37.7
Nn5g27242 Nelumbo nucifera HOM05D006511 ORTHO05D007567 1.8e-13 80.9 85 49.4
Lalb_Chr19g0131891 Lupinus albus HOM05D006511 ORTHO05D007567 3.1e-10 70.1 88 40.9
COL.COLO4_36458 Corchorus olitorius HOM05D006511 ORTHO05D007567 5.3e-10 69.3 80 47.5
Hma1.2p1_1476F.1_g285810 Hydrangea macrophylla HOM05D006511 ORTHO05D007567 6.9e-10 68.9 55 58.2
Lalb_Chr19g0131881 Lupinus albus HOM05D006511 ORTHO05D007567 2.2e-08 63.9 45 68.9
Haze_13997 Corylus avellana HOM05D006511 ORTHO05D007567 2.9e-08 63.5 63 54.0
Lsat_1_v5_gn_0_19000 Lactuca sativa HOM05D006511 ORTHO05D007567 3.8e-08 63.2 91 39.6
SMO137G0232 Selaginella moellendorffii HOM05D006511 ORTHO05D007567 1.1e-07 61.6 141 24.8
Haze_13999 Corylus avellana HOM05D006511 ORTHO05D007567 9.3e-07 58.5 55 61.8


User provided reference genes

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