Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32614 Striga asiatica HOM05D003874 ORTHO05D004545 1.4e-168 596.3 307 100.0
SGA_v2.0_scaffold24G10651 Striga asiatica HOM05D003874 ORTHO05D004545 3.9e-115 418.7 315 72.1
Migut.C01383 Erythranthe guttata HOM05D003874 ORTHO05D004545 1.0e-83 314.3 327 57.8
MSTRG.1601 Avicennia marina HOM05D003874 ORTHO05D004545 3.1e-80 302.8 323 53.3
SalBow7G3598 Salvia bowleyana HOM05D003874 ORTHO05D004545 2.1e-73 280.0 325 53.2
MSTRG.24132 Avicennia marina HOM05D003874 ORTHO05D004545 1.9e-69 266.9 320 50.0
Oeu028635.2 Olea europaea HOM05D003874 ORTHO05D004545 2.7e-68 263.1 342 49.1
Dinv37410 Davidia involucrata HOM05D003874 ORTHO05D004545 2.3e-67 260.0 322 50.0
MSTRG.22473 Avicennia marina HOM05D003874 ORTHO05D004545 3.9e-67 259.2 314 51.0
Dinv22112 Davidia involucrata HOM05D003874 ORTHO05D004545 1.6e-65 253.8 333 48.3
Nitab4.5_0000980g0270 Nicotiana tabacum HOM05D003874 ORTHO05D004545 2.8e-65 253.1 314 49.4
SalBow1G3841 Salvia bowleyana HOM05D003874 ORTHO05D004545 1.5e-63 247.3 309 49.2
SalBow6G4185 Salvia bowleyana HOM05D003874 ORTHO05D004545 4.5e-63 245.7 308 49.7
CANSAT21G0097 Cannabis sativa HOM05D003874 ORTHO05D004545 1.3e-62 244.2 317 50.2
Potri.013G099200 Populus trichocarpa HOM05D003874 ORTHO05D004545 1.3e-62 244.2 349 45.3
Peaxi162Scf00078g00734 Petunia axillaris HOM05D003874 ORTHO05D004545 2.9e-62 243.0 342 46.2
CSS0025181 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 3.8e-62 242.7 330 45.8
Sabra13G0085100 Salix brachista HOM05D003874 ORTHO05D004545 1.1e-61 241.1 339 46.0
Atru.chr13.2507 Acer truncatum HOM05D003874 ORTHO05D004545 1.2e-60 237.7 328 47.6
Rhsim12G0002900 Rhododendron simsii HOM05D003874 ORTHO05D004545 1.6e-60 237.3 336 45.5
CSS0009242 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.1e-60 236.9 310 47.7
Cfa008075 Carpinus fangiana HOM05D003874 ORTHO05D004545 2.1e-60 236.9 344 44.5
CSS0015095 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 2.7e-60 236.5 310 47.7
Cc10_g08580 Coffea canephora HOM05D003874 ORTHO05D004545 4.6e-60 235.7 352 46.9
Manes.02G201800 Manihot esculenta HOM05D003874 ORTHO05D004545 4.6e-60 235.7 335 43.9
Atru.chr13.2495 Acer truncatum HOM05D003874 ORTHO05D004545 1.0e-59 234.6 328 47.3
Cpa.g.sc21.87 Carica papaya HOM05D003874 ORTHO05D004545 5.1e-59 232.3 378 41.3
Potri.019G071300 Populus trichocarpa HOM05D003874 ORTHO05D004545 7.4e-58 228.4 353 43.3
Prupe.8G006800 Prunus persica HOM05D003874 ORTHO05D004545 1.3e-57 227.6 333 45.9
QL09p001799 Quercus lobata HOM05D003874 ORTHO05D004545 6.3e-57 225.3 350 43.7
MD10G1004400 Malus domestica HOM05D003874 ORTHO05D004545 1.1e-56 224.6 341 45.2
Actinidia29373 Actinidia chinensis HOM05D003874 ORTHO05D004545 2.4e-56 223.4 367 42.5
Haze_13960 Corylus avellana HOM05D003874 ORTHO05D004545 6.9e-56 221.9 373 41.0
Nitab4.5_0000283g0160 Nicotiana tabacum HOM05D003874 ORTHO05D004545 9.1e-56 221.5 314 46.2
FAN24G1984 Fragaria x ananassa HOM05D003874 ORTHO05D004545 3.4e-55 219.5 322 46.0
Gohir.A13G115500 Gossypium hirsutum HOM05D003874 ORTHO05D004545 7.7e-55 218.4 361 41.3
FvH4_2g00770 Fragaria vesca HOM05D003874 ORTHO05D004545 1.0e-54 218.0 322 45.7
TAR628G1590 Trochodendron aralioides HOM05D003874 ORTHO05D004545 1.0e-54 218.0 344 43.0
vmacro00941 Vaccinium macrocarpon HOM05D003874 ORTHO05D004545 1.7e-54 217.2 337 40.9
Manes.18G116100 Manihot esculenta HOM05D003874 ORTHO05D004545 2.2e-54 216.9 351 41.6
COL.COLO4_25146 Corchorus olitorius HOM05D003874 ORTHO05D004545 3.8e-54 216.1 378 40.5
FAN20G2080 Fragaria x ananassa HOM05D003874 ORTHO05D004545 5.0e-54 215.7 319 45.5
Gohir.D13G118600 Gossypium hirsutum HOM05D003874 ORTHO05D004545 5.0e-54 215.7 361 41.0
TWI18G0284 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 8.5e-54 214.9 366 41.0
Gorai.013G133000 Gossypium raimondii HOM05D003874 ORTHO05D004545 1.4e-53 214.2 361 41.0
Duzib268G0037 Durio zibethinus HOM05D003874 ORTHO05D004545 1.9e-53 213.8 366 39.9
Thecc.08G178800 Theobroma cacao HOM05D003874 ORTHO05D004545 1.9e-53 213.8 363 40.8
Actinidia03528 Actinidia chinensis HOM05D003874 ORTHO05D004545 3.2e-53 213.0 369 40.9
CiPaw.04G009100 Carya illinoinensis HOM05D003874 ORTHO05D004545 4.2e-53 212.6 365 40.8
Duzib177G0949 Durio zibethinus HOM05D003874 ORTHO05D004545 7.2e-53 211.8 362 40.1
MD05G1003400 Malus domestica HOM05D003874 ORTHO05D004545 9.4e-53 211.5 354 41.0
RcHm_v2.0_Chr6g0251151 Rosa chinensis HOM05D003874 ORTHO05D004545 1.6e-52 210.7 324 43.2
FAN27G1922 Fragaria x ananassa HOM05D003874 ORTHO05D004545 1.0e-51 208.0 319 44.5
Ciclev10020185m.g Citrus clementina HOM05D003874 ORTHO05D004545 3.0e-51 206.5 364 39.0
TWI75G0660 Tripterygium wilfordii HOM05D003874 ORTHO05D004545 5.2e-51 205.7 364 39.6
CiPaw.03G014100 Carya illinoinensis HOM05D003874 ORTHO05D004545 6.7e-51 205.3 361 40.2
Nn5g27385 Nelumbo nucifera HOM05D003874 ORTHO05D004545 8.8e-51 204.9 360 40.0
ClCG08G000760 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.1e-50 204.5 331 40.8
TAR376G0450 Trochodendron aralioides HOM05D003874 ORTHO05D004545 2.6e-50 203.4 349 40.7
Nitab4.5_0000213g0070 Nicotiana tabacum HOM05D003874 ORTHO05D004545 5.7e-50 202.2 370 38.9
MELO3C022165.2 Cucumis melo HOM05D003874 ORTHO05D004545 7.4e-50 201.8 341 40.2
DCAR_003510 Daucus carota HOM05D003874 ORTHO05D004545 2.2e-49 200.3 311 41.5
ClCG05G024400 Citrullus lanatus HOM05D003874 ORTHO05D004545 3.7e-49 199.5 332 41.6
Sabra19G0083400 Salix brachista HOM05D003637 ORTHO05D004175 1.8e-48 197.2 401 36.7
Sed0026799 Sechium edule HOM05D003874 ORTHO05D004545 1.8e-48 197.2 334 40.7
Sopen07g031240 Solanum pennellii HOM05D003874 ORTHO05D004545 4.1e-48 196.1 313 41.5
CsaV3_5G039860 Cucumis sativus L. HOM05D003874 ORTHO05D004545 5.3e-48 195.7 341 38.1
Solyc07g063050.1 Solanum lycopersicum HOM05D003874 ORTHO05D004545 2.0e-47 193.7 313 41.2
Eucgr.F02945 Eucalyptus grandis HOM05D003874 ORTHO05D004545 2.6e-47 193.4 400 37.8
Aqoxy6G00117 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 3.5e-47 193.0 314 40.4
PGSC0003DMG400012413 Solanum tuberosum HOM05D003874 ORTHO05D004545 1.7e-46 190.7 313 41.5
PGR042G0135 Punica granatum HOM05D003874 ORTHO05D004545 5.5e-45 185.7 333 40.5
Lsat_1_v5_gn_9_75521 Lactuca sativa HOM05D003874 ORTHO05D004545 2.1e-44 183.7 312 41.3
Sabra13G0083800 Salix brachista HOM05D003874 ORTHO05D004545 2.1e-44 183.7 306 41.5
Oeu013912.1 Olea europaea HOM05D003874 ORTHO05D004545 2.7e-44 183.3 439 33.5
MELO3C012083.2 Cucumis melo HOM05D003874 ORTHO05D004545 1.0e-43 181.4 332 38.3
MBI03_g29107_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 1.0e-43 181.4 370 35.4
PSO170G4959 Papaver somniferum HOM05D003874 ORTHO05D004545 1.4e-43 181.0 355 39.4
EL10Ac1g01274 Beta vulgaris HOM05D003874 ORTHO05D004545 2.3e-43 180.3 308 39.9
Nitab4.5_0000554g0030 Nicotiana tabacum HOM05D003874 ORTHO05D004545 3.0e-43 179.9 362 37.8
Hma1.2p1_0016F.1_g010740 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 4.0e-43 179.5 263 43.7
Hma1.2p1_0016F.1_g010745 Hydrangea macrophylla HOM05D003874 ORTHO05D004545 4.0e-43 179.5 263 43.7
CDE02G0043 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 7.5e-42 175.3 332 36.7
Sed0021145 Sechium edule HOM05D003874 ORTHO05D004545 7.5e-42 175.3 392 36.0
Aa31LG9G4130 Aethionema arabicum HOM05D003874 ORTHO05D004545 3.7e-41 172.9 319 37.3
PGSC0003DMG400008421 Solanum tuberosum HOM05D003874 ORTHO05D004545 3.7e-41 172.9 358 39.4
ECA232G3741 Erigeron canadensis HOM05D003874 ORTHO05D004545 3.1e-40 169.9 318 39.0
CAN.G761.11 Capsicum annuum HOM05D003874 ORTHO05D004545 5.9e-39 165.6 303 41.6
CsaV3_5G032550 Cucumis sativus L. HOM05D003874 ORTHO05D004545 5.9e-39 165.6 331 37.2
PSO017G0683 Papaver somniferum HOM05D003874 ORTHO05D004545 5.9e-39 165.6 340 39.1
CAN.G761.10 Capsicum annuum HOM05D003874 ORTHO05D004545 1.3e-38 164.5 303 42.2
HanXRQChr15g0484691 Helianthus annuus HOM05D003874 ORTHO05D004545 1.3e-38 164.5 302 39.7
AT4G13530 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 2.2e-38 163.7 306 38.2
THA.LOC104808737 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 1.9e-37 160.6 330 36.7
unitig_37.g13076 Utricularia gibba HOM05D003874 ORTHO05D004545 2.5e-37 160.2 156 55.8
Ah.05g170390 Amaranthus hybridus HOM05D003874 ORTHO05D004545 9.4e-37 158.3 304 37.5
CDE08G0633 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 1.2e-36 157.9 350 34.0
Thhalv10028826m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 2.1e-36 157.1 322 37.9
Lj7A419T39 Lonicera japonica HOM05D003874 ORTHO05D004545 8.0e-36 155.2 375 34.7
THA.LOC104821626 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 1.0e-35 154.8 326 35.0
AUR62038535 Chenopodium quinoa HOM05D003874 ORTHO05D004545 1.8e-35 154.1 305 40.0
GSVIVG01036285001 Vitis vinifera HOM05D003874 ORTHO05D004545 5.2e-35 152.5 132 62.1
Carub.0007s2901 Capsella rubella HOM05D003874 ORTHO05D004545 1.2e-34 151.4 309 35.9
AT4G10080 Arabidopsis thaliana HOM05D003874 ORTHO05D004545 4.4e-34 149.4 332 37.0
Aqoxy5G01942 Aquilegia oxysepala HOM05D003874 ORTHO05D004545 5.7e-34 149.1 328 37.5
AL7G43110 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 5.7e-34 149.1 309 35.6
Hund16917 Selenicereus undatus HOM05D003874 ORTHO05D004545 5.7e-34 149.1 121 63.6
AUR62013384 Chenopodium quinoa HOM05D003874 ORTHO05D004545 2.2e-33 147.1 305 37.7
CARHR219160 Cardamine hirsuta HOM05D003874 ORTHO05D004545 9.1e-32 141.7 305 32.8
Thhalv10025948m.g Eutrema salsugineum HOM05D003874 ORTHO05D004545 1.2e-31 141.4 306 34.6
Carub.0006s2864 Capsella rubella HOM05D003874 ORTHO05D004545 2.0e-31 140.6 314 35.0
Oeu046029.1 Olea europaea HOM05D003874 ORTHO05D004545 2.0e-31 140.6 186 45.7
Sp7g11130 Schrenkiella parvula HOM05D003874 ORTHO05D004545 2.2e-30 137.1 304 35.2
BcaC08g44301 Brassica carinata HOM05D003874 ORTHO05D004545 3.8e-30 136.3 306 34.6
C06p17230 Brassica napus HOM05D003874 ORTHO05D004545 5.0e-30 136.0 306 34.6
BolC6t36923H Brassica oleracea HOM05D003874 ORTHO05D004545 5.0e-30 136.0 306 34.6
THA.LOC104813368 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 5.0e-30 136.0 312 37.5
DCAR_014068 Daucus carota HOM05D003874 ORTHO05D004545 6.5e-30 135.6 208 41.8
BcaB05g23922 Brassica carinata HOM05D003874 ORTHO05D004545 1.5e-29 134.4 315 34.9
BcaB01g01449 Brassica carinata HOM05D003874 ORTHO05D004545 5.5e-29 132.5 307 35.2
THA.LOC104806752 Tarenaya hassleriana HOM05D003874 ORTHO05D004545 5.5e-29 132.5 372 31.7
AL6G43860 Arabidopsis lyrata HOM05D003874 ORTHO05D004545 9.5e-29 131.7 319 34.2
A05p16560 Brassica napus HOM05D003874 ORTHO05D004545 1.6e-28 131.0 315 34.9
MBI06_g14322_MAGBIO Magnolia biondii HOM05D003874 ORTHO05D004545 2.8e-28 130.2 117 54.7
BraA05t20564Z Brassica rapa HOM05D003874 ORTHO05D004545 6.1e-28 129.0 310 34.8
A09p28850 Brassica napus HOM05D003874 ORTHO05D004545 1.8e-27 127.5 307 32.9
BolC2t10292H Brassica oleracea HOM05D003874 ORTHO05D004545 1.8e-27 127.5 109 59.6
Sp6g07450 Schrenkiella parvula HOM05D003874 ORTHO05D004545 3.0e-27 126.7 326 33.7
BcaC03g16428 Brassica carinata HOM05D003874 ORTHO05D004545 5.2e-27 125.9 128 53.9
C02p42530 Brassica napus HOM05D003874 ORTHO05D004545 5.2e-27 125.9 128 53.9
BraA09t38447Z Brassica rapa HOM05D003874 ORTHO05D004545 5.2e-27 125.9 303 34.3
Lalb_Chr15g0080071 Lupinus albus HOM05D003874 ORTHO05D004545 1.5e-26 124.4 108 62.0
CARHR261100 Cardamine hirsuta HOM05D003874 ORTHO05D004545 7.5e-26 122.1 360 31.4
Aa31LG9G11920 Aethionema arabicum HOM05D003874 ORTHO05D004545 9.8e-26 121.7 363 31.4
CsaV3_2G033240 Cucumis sativus L. HOM05D003874 ORTHO05D004545 1.3e-25 121.3 369 32.8
BcaC04g21012 Brassica carinata HOM05D003874 ORTHO05D004545 1.7e-25 120.9 304 33.9
C09p36670 Brassica napus HOM05D003874 ORTHO05D004545 1.7e-25 120.9 304 33.9
BolC9t56498H Brassica oleracea HOM05D003874 ORTHO05D004545 1.7e-25 120.9 304 33.9
Ca_27532_v3 Cicer arietinum L. HOM05D003874 ORTHO05D004545 1.7e-25 120.9 108 58.3
A02p26740 Brassica napus HOM05D003874 ORTHO05D004545 2.8e-25 120.2 322 34.5
BraA02t07678Z Brassica rapa HOM05D003874 ORTHO05D004545 2.8e-25 120.2 322 34.5
Sc21g0007200 Simmondsia chinensis HOM05D003874 ORTHO05D004545 3.7e-25 119.8 345 32.2
Medtr3g006350 Medicago truncatula HOM05D003874 ORTHO05D004545 4.9e-25 119.4 131 51.9
arahy.Tifrunner.gnm1.ann1.GHV9B3 Arachis hypogaea HOM05D003874 ORTHO05D004545 1.1e-24 118.2 104 57.7
arahy.Tifrunner.gnm1.ann1.N113B0 Arachis hypogaea HOM05D003874 ORTHO05D004545 1.1e-24 118.2 104 57.7
ClCG11G008410 Citrullus lanatus HOM05D003874 ORTHO05D004545 1.1e-24 118.2 371 31.3
TPR.G25536 Trifolium pratense HOM05D003874 ORTHO05D004545 5.9e-23 112.5 109 55.0
Psat5g232160 Pisum sativum HOM05D003874 ORTHO05D004545 1.0e-22 111.7 126 51.6
Sopen11g018310 Solanum pennellii HOM05D003874 ORTHO05D004545 2.3e-22 110.5 130 53.8
Lj3g0022236 Lotus japonicus HOM05D003874 ORTHO05D004545 6.6e-22 109.0 110 53.6
Solyc11g040300.2 Solanum lycopersicum HOM05D003874 ORTHO05D004545 5.6e-21 105.9 74 73.0
CSS0021765 Camellia sinensis var. sinensis HOM05D003874 ORTHO05D004545 9.5e-21 105.1 74 71.6
CDE07G0664 Ceratophyllum demersum HOM05D003874 ORTHO05D004545 3.6e-20 103.2 185 34.1
Zm00001eb182290 Zea mays HOM05D003874 ORTHO05D004545 1.4e-19 101.3 249 32.5
Glyma.06G323500 Glycine max HOM05D003874 ORTHO05D004545 1.8e-19 100.9 135 46.7
HPP92_005639 Vanilla planifolia HOM05D000572 ORTHO05D000840 8.9e-19 98.6 304 30.3
VMungo1080G0642 Vigna mungo HOM05D003874 ORTHO05D004545 1.2e-18 98.2 157 43.3
Glyma.04G111000 Glycine max HOM05D003874 ORTHO05D004545 3.4e-18 96.7 110 49.1
Phvul.005G002800 Phaseolus vulgaris HOM05D003874 ORTHO05D004545 1.3e-17 94.7 125 46.4
Os02g0558500 Oryza sativa ssp. japonica HOM05D003874 ORTHO05D004545 6.4e-17 92.4 97 43.3
Zm00001eb366050 Zea mays HOM05D003874 ORTHO05D004545 1.4e-16 91.3 308 27.9
BcaB05g25162 Brassica carinata HOM05D003874 ORTHO05D004545 1.2e-15 88.2 144 42.4
unitig_37.g13077 Utricularia gibba HOM05D003874 ORTHO05D030560 1.6e-15 87.8 104 45.2
HPP92_009210 Vanilla planifolia HOM05D003874 ORTHO05D004545 2.3e-14 84.0 310 26.1
CARHR261120 Cardamine hirsuta HOM05D003874 ORTHO05D004545 5.0e-14 82.8 263 28.1
MELO3C008094.2 Cucumis melo HOM05D003874 ORTHO05D004545 6.6e-14 82.4 322 29.5
SalBow2G2594 Salvia bowleyana HOM05D033584 ORTHO05D030560 4.3e-13 79.7 97 50.5
Zm00001eb145550 Zea mays HOM05D003874 ORTHO05D004545 1.6e-12 77.8 139 36.0
SEGI_28614 Sequoiadendron giganteum HOM05D003874 ORTHO05D004545 2.1e-12 77.4 84 46.4
SalBow8G3890 Salvia bowleyana HOM05D033584 ORTHO05D030560 7.5e-10 68.9 93 47.3
Nn4g22326 Nelumbo nucifera HOM05D003874 ORTHO05D004545 1.3e-09 68.2 44 79.5
Sabra16G0296100 Salix brachista HOM05D003874 ORTHO05D004545 4.6e-07 59.7 93 40.9
Sabra16G0293600 Salix brachista HOM05D003874 ORTHO05D004545 1.0e-06 58.5 93 40.9
Sabra16G0294500 Salix brachista HOM05D003874 ORTHO05D004545 1.3e-06 58.2 93 40.9


User provided reference genes

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