Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 2.8e-55 218.4 110 100.0
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 6.0e-26 120.9 72 84.7
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 4.3e-24 114.8 72 79.2
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 2.1e-23 112.5 73 78.1
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 4.7e-23 111.3 72 77.8
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 6.2e-23 110.9 72 76.4
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 8.1e-23 110.5 72 77.8
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 1.4e-22 109.8 72 75.0
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 1.8e-22 109.4 72 75.0
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 1.8e-22 109.4 72 77.8
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 2.4e-22 109.0 72 76.4
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 2.4e-22 109.0 72 75.0
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 3.1e-22 108.6 72 75.0
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 4.0e-22 108.2 72 77.8
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 5.2e-22 107.8 72 75.0
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 5.2e-22 107.8 72 76.4
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 6.8e-22 107.5 72 76.4
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 8.9e-22 107.1 72 73.6
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 1.5e-21 106.3 72 75.0
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 2.0e-21 105.9 72 73.6
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.0e-21 105.9 72 75.0
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.0e-21 105.9 72 75.0
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 3.4e-21 105.1 72 75.0
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 3.4e-21 105.1 72 72.2
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 3.4e-21 105.1 72 73.6
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 3.4e-21 105.1 72 75.0
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 4.4e-21 104.8 76 67.1
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 4.4e-21 104.8 72 73.6
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 4.4e-21 104.8 71 73.2
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 4.4e-21 104.8 72 72.2
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 5.8e-21 104.4 72 73.6
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 5.8e-21 104.4 72 73.6
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 5.8e-21 104.4 70 75.7
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 5.8e-21 104.4 70 75.7
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 5.8e-21 104.4 73 74.0
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 7.6e-21 104.0 72 73.6
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 7.6e-21 104.0 72 68.1
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 7.6e-21 104.0 73 74.0
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 7.6e-21 104.0 73 74.0
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 9.9e-21 103.6 73 74.0
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 9.9e-21 103.6 73 74.0
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 9.9e-21 103.6 72 69.4
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 9.9e-21 103.6 72 69.4
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 9.9e-21 103.6 68 75.0
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 9.9e-21 103.6 68 76.5
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 9.9e-21 103.6 68 76.5
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 1.3e-20 103.2 72 70.8
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 1.3e-20 103.2 72 73.6
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 1.3e-20 103.2 72 70.8
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 1.7e-20 102.8 72 70.8
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 1.7e-20 102.8 72 73.6
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.2e-20 102.4 72 72.2
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 2.2e-20 102.4 72 70.8
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 2.9e-20 102.1 73 72.6
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 2.9e-20 102.1 72 72.2
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 4.9e-20 101.3 69 76.8
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 8.4e-20 100.5 68 70.6
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 8.4e-20 100.5 72 68.1
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 8.4e-20 100.5 72 72.2
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 8.4e-20 100.5 72 70.8
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 8.4e-20 100.5 72 70.8
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 8.4e-20 100.5 69 78.3
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 1.1e-19 100.1 72 70.8
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 1.1e-19 100.1 68 75.0
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 1.1e-19 100.1 79 64.6
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 1.1e-19 100.1 72 69.4
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 1.1e-19 100.1 74 70.3
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 1.4e-19 99.8 72 66.7
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 1.4e-19 99.8 72 70.8
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 1.9e-19 99.4 72 68.1
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 2.4e-19 99.0 72 69.4
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 4.1e-19 98.2 65 75.4
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 5.4e-19 97.8 68 70.6
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 7.1e-19 97.4 72 69.4
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 7.1e-19 97.4 72 68.1
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 7.1e-19 97.4 72 68.1
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 1.2e-18 96.7 72 69.4
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 1.2e-18 96.7 68 70.6
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 1.2e-18 96.7 65 70.8
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 1.6e-18 96.3 72 68.1
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 2.1e-18 95.9 65 69.2
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 2.7e-18 95.5 65 70.8
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 4.6e-18 94.7 65 69.2
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 7.8e-18 94.0 65 67.7
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 1.0e-17 93.6 68 67.6
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 1.3e-17 93.2 65 67.7
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 1.3e-17 93.2 72 63.9
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 1.7e-17 92.8 68 69.1
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 1.7e-17 92.8 68 69.1
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 1.7e-17 92.8 72 63.9
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 1.7e-17 92.8 72 68.1
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 3.9e-17 91.7 66 65.2
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 5.1e-17 91.3 61 73.8
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 5.1e-17 91.3 72 65.3
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 1.9e-16 89.4 61 72.1
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 1.9e-16 89.4 69 66.7
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 2.5e-16 89.0 69 68.1
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 2.5e-16 89.0 69 68.1
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 3.3e-16 88.6 69 66.7
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 5.6e-16 87.8 69 66.7
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 3.6e-15 85.1 63 65.1
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 8.1e-15 84.0 56 73.2
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 8.1e-15 84.0 66 68.2
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 1.1e-14 83.6 79 53.2
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 5.2e-14 81.3 65 58.5
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 1.7e-12 76.3 65 61.5
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 2.9e-12 75.5 65 63.1
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 8.4e-12 73.9 52 69.2
MCO05G024 Micromonas commoda HOM05D007049 ORTHO05D008896 1.3e-07 60.1 76 44.7
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 3.6e-07 58.5 59 55.9


User provided reference genes

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