Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32605 Striga asiatica HOM05D005425 ORTHO05D006686 1.6e-116 422.9 234 100.0
Migut.C01372 Erythranthe guttata HOM05D005425 ORTHO05D006686 5.0e-46 188.7 245 58.4
MSTRG.1593 Avicennia marina HOM05D005425 ORTHO05D006686 5.7e-42 175.3 254 51.6
Oeu023197.1 Olea europaea HOM05D005425 ORTHO05D006686 1.7e-41 173.7 186 61.3
unitig_578.g16119 Utricularia gibba HOM05D005425 ORTHO05D006686 3.4e-39 166.0 252 47.6
Cc01_g12410 Coffea canephora HOM05D005425 ORTHO05D006686 5.9e-39 165.2 193 57.0
TWI34G0652 Tripterygium wilfordii HOM05D005425 ORTHO05D006686 7.9e-36 154.8 244 51.2
Gorai.001G018900 Gossypium raimondii HOM05D005425 ORTHO05D006686 1.8e-35 153.7 239 49.0
Duzib150G0231 Durio zibethinus HOM05D005425 ORTHO05D006686 2.3e-35 153.3 201 52.2
Gohir.A07G018500 Gossypium hirsutum HOM05D005425 ORTHO05D006686 5.2e-35 152.1 239 48.5
Nitab4.5_0000610g0160 Nicotiana tabacum HOM05D005425 ORTHO05D006686 5.2e-35 152.1 185 58.9
SEGI_31971 Sequoiadendron giganteum HOM05D005425 ORTHO05D006686 6.7e-35 151.8 119 65.5
CAN.G764.11 Capsicum annuum HOM05D005425 ORTHO05D006686 8.8e-35 151.4 244 49.2
Thecc.09G067100 Theobroma cacao HOM05D005425 ORTHO05D006686 1.1e-34 151.0 200 52.0
COL.COLO4_21175 Corchorus olitorius HOM05D005425 ORTHO05D006686 1.5e-34 150.6 197 53.8
Gohir.D07G018300 Gossypium hirsutum HOM05D005425 ORTHO05D006686 1.5e-34 150.6 239 48.5
TWI63G1799 Tripterygium wilfordii HOM05D005425 ORTHO05D006686 2.6e-34 149.8 244 50.4
PGR044G1074 Punica granatum HOM05D005425 ORTHO05D006686 5.7e-34 148.7 109 69.7
Peaxi162Scf00406g00239 Petunia axillaris HOM05D005425 ORTHO05D006686 7.4e-34 148.3 256 47.3
AUR62017596 Chenopodium quinoa HOM05D005425 ORTHO05D006686 1.3e-33 147.5 123 64.2
Solyc11g073240.2 Solanum lycopersicum HOM05D005425 ORTHO05D006686 1.7e-33 147.1 251 47.8
vmacro16402 Vaccinium macrocarpon HOM05D005425 ORTHO05D006686 1.7e-33 147.1 245 47.8
DCAR_012869 Daucus carota HOM05D005425 ORTHO05D006686 2.8e-33 146.4 254 43.7
Duzib168G1380 Durio zibethinus HOM05D005425 ORTHO05D006686 2.8e-33 146.4 239 50.6
AUR62015135 Chenopodium quinoa HOM05D005425 ORTHO05D006686 6.3e-33 145.2 123 62.6
Potri.006G217400 Populus trichocarpa HOM05D005425 ORTHO05D006686 1.4e-32 144.1 243 46.9
Cfa010679 Carpinus fangiana HOM05D005425 ORTHO05D006686 1.8e-32 143.7 115 65.2
EL10Ac9g22844 Beta vulgaris HOM05D005425 ORTHO05D006686 2.4e-32 143.3 123 61.0
Lj4P729T25 Lonicera japonica HOM05D005425 ORTHO05D006686 2.4e-32 143.3 108 69.4
TPR.G12630 Trifolium pratense HOM05D005425 ORTHO05D006686 4.1e-32 142.5 140 65.0
ECA247G3713 Erigeron canadensis HOM05D005425 ORTHO05D006686 5.3e-32 142.1 245 45.7
Actinidia20626 Actinidia chinensis HOM05D005425 ORTHO05D006686 7.0e-32 141.7 108 67.6
Lj4g0004112 Lotus japonicus HOM05D005425 ORTHO05D006686 7.0e-32 141.7 109 67.0
CsaV3_1G041480 Cucumis sativus L. HOM05D005425 ORTHO05D006686 9.1e-32 141.4 165 58.2
Dinv19577 Davidia involucrata HOM05D005425 ORTHO05D006686 9.1e-32 141.4 185 55.1
GSVIVG01000275001 Vitis vinifera HOM05D005425 ORTHO05D006686 1.2e-31 141.0 108 67.6
Aqoxy6G03062 Aquilegia oxysepala HOM05D005425 ORTHO05D006686 1.6e-31 140.6 107 66.4
Haze_26083 Corylus avellana HOM05D005425 ORTHO05D006686 1.6e-31 140.6 122 62.3
Eucgr.C00752 Eucalyptus grandis HOM05D005425 ORTHO05D006686 1.6e-31 140.6 183 54.6
MD15G1225900 Malus domestica HOM05D005425 ORTHO05D006686 1.6e-31 140.6 189 55.0
Sopen11g030870 Solanum pennellii HOM05D005425 ORTHO05D006686 1.6e-31 140.6 254 46.1
PGSC0003DMG400015542 Solanum tuberosum HOM05D005425 ORTHO05D006686 5.9e-31 138.7 164 57.3
MD02G1106000 Malus domestica HOM05D005425 ORTHO05D006686 7.7e-31 138.3 240 48.3
PSO675G8782 Papaver somniferum HOM05D005425 ORTHO05D006686 7.7e-31 138.3 115 62.6
arahy.Tifrunner.gnm1.ann1.A16VYK Arachis hypogaea HOM05D005425 ORTHO05D006686 1.0e-30 137.9 123 60.2
CiPaw.03G198700 Carya illinoinensis HOM05D005425 ORTHO05D006686 1.0e-30 137.9 112 64.3
Ca_21353_v3 Cicer arietinum L. HOM05D005425 ORTHO05D006686 1.0e-30 137.9 215 50.2
Nn6g31504 Nelumbo nucifera HOM05D005425 ORTHO05D006686 1.0e-30 137.9 105 67.6
Hund24245 Selenicereus undatus HOM05D000001 ORTHO05D000003 1.0e-30 137.9 249 43.4
Lalb_Chr07g0181511 Lupinus albus HOM05D005425 ORTHO05D006686 1.7e-30 137.1 217 48.4
Atru.chr7.1809 Acer truncatum HOM05D005425 ORTHO05D006686 2.9e-30 136.3 109 64.2
ATR0006G051 Amborella trichopoda HOM05D005425 ORTHO05D006686 2.9e-30 136.3 108 63.9
Medtr4g123593 Medicago truncatula HOM05D005425 ORTHO05D006686 2.9e-30 136.3 120 60.0
Manes.03G055300 Manihot esculenta HOM05D005425 ORTHO05D006686 3.8e-30 136.0 251 44.2
PSO717G0103 Papaver somniferum HOM05D005425 ORTHO05D006686 5.0e-30 135.6 115 61.7
HPP92_002368 Vanilla planifolia HOM05D005425 ORTHO05D006686 6.5e-30 135.2 122 59.0
Zm00001eb068040 Zea mays HOM05D005425 ORTHO05D006686 6.5e-30 135.2 108 67.6
arahy.Tifrunner.gnm1.ann1.I1NZHN Arachis hypogaea HOM05D005425 ORTHO05D006686 8.5e-30 134.8 123 59.3
Haze_03605 Corylus avellana HOM05D006517 ORTHO05D007886 1.1e-29 134.4 172 57.0
Lalb_Chr12g0200431 Lupinus albus HOM05D005425 ORTHO05D006686 1.1e-29 134.4 108 65.7
Psat4g020320 Pisum sativum HOM05D005425 ORTHO05D006686 1.1e-29 134.4 117 60.7
RcHm_v2.0_Chr2g0096571 Rosa chinensis HOM05D005425 ORTHO05D006686 1.1e-29 134.4 237 46.0
HPP92_027595 Vanilla planifolia HOM05D005425 ORTHO05D006686 1.1e-29 134.4 123 58.5
CANSAT56G2296 Cannabis sativa HOM05D005425 ORTHO05D006686 1.5e-29 134.0 105 65.7
CDE11G0474 Ceratophyllum demersum HOM05D005425 ORTHO05D006686 1.5e-29 134.0 113 60.2
VMungo1215G3244 Vigna mungo HOM05D005425 ORTHO05D006686 1.5e-29 134.0 114 61.4
CSS0042296 Camellia sinensis var. sinensis HOM05D005425 ORTHO05D006686 1.9e-29 133.7 104 64.4
HanXRQChr02g0040411 Helianthus annuus HOM05D005425 ORTHO05D006686 1.9e-29 133.7 250 46.0
Os04g0653100 Oryza sativa ssp. japonica HOM05D005425 ORTHO05D006686 1.9e-29 133.7 107 65.4
Pp3c23_11420 Physcomitrium patens HOM05D005425 ORTHO05D006686 4.2e-29 132.5 112 59.8
Sc19g0002240 Simmondsia chinensis HOM05D005425 ORTHO05D006686 4.2e-29 132.5 253 45.5
HPP92_010993 Vanilla planifolia HOM05D005425 ORTHO05D006686 5.5e-29 132.1 113 61.1
Sed0015214 Sechium edule HOM05D005425 ORTHO05D006686 7.2e-29 131.7 153 58.2
Prupe.7G189100 Prunus persica HOM05D005425 ORTHO05D006686 9.4e-29 131.3 174 54.0
Glyma.13G116300 Glycine max HOM05D005425 ORTHO05D006686 1.2e-28 131.0 193 49.7
MBI13_g05972_MAGBIO Magnolia biondii HOM05D005425 ORTHO05D006686 1.2e-28 131.0 158 57.0
SMO347G0418 Selaginella moellendorffii HOM05D005425 ORTHO05D006686 1.2e-28 131.0 114 61.4
PGSC0003DMG401015541 Solanum tuberosum HOM05D005425 ORTHO05D006686 1.6e-28 130.6 256 43.8
PGSC0003DMG402015541 Solanum tuberosum HOM05D005425 ORTHO05D006686 1.6e-28 130.6 256 43.8
Glyma.17G043500 Glycine max HOM05D005425 ORTHO05D006686 2.1e-28 130.2 206 46.6
FvH4_1g09870 Fragaria vesca HOM05D005425 ORTHO05D006686 2.7e-28 129.8 242 45.5
Ah.01g013630 Amaranthus hybridus HOM05D005425 ORTHO05D006686 3.6e-28 129.4 253 44.3
Pp3c23_5560 Physcomitrium patens HOM05D005425 ORTHO05D006686 8.0e-28 128.3 110 59.1
Sabra06G0167600 Salix brachista HOM05D005425 ORTHO05D006686 8.0e-28 128.3 243 45.3
CANSAT56G0436 Cannabis sativa HOM05D005425 ORTHO05D006686 1.8e-27 127.1 177 52.5
Phvul.003G125400 Phaseolus vulgaris HOM05D005425 ORTHO05D006686 1.8e-27 127.1 106 61.3
THA.LOC104810974 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 1.8e-27 127.1 109 58.7
FAN19G0780 Fragaria x ananassa HOM05D005425 ORTHO05D006686 2.3e-27 126.7 247 45.7
Rhsim12G0137300 Rhododendron simsii HOM05D005425 ORTHO05D006686 2.3e-27 126.7 246 44.3
Lsat_1_v5_gn_1_2721 Lactuca sativa HOM05D005425 ORTHO05D006686 4.0e-27 125.9 224 43.8
MBI13_g09074_MAGBIO Magnolia biondii HOM05D005425 ORTHO05D006686 4.0e-27 125.9 112 57.1
THA.LOC104799598 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 4.0e-27 125.9 108 59.3
Ciclev10009195m.g Citrus clementina HOM05D005425 ORTHO05D006686 5.2e-27 125.6 231 46.8
TAR383G0806 Trochodendron aralioides HOM05D005425 ORTHO05D006686 5.2e-27 125.6 131 53.4
AT3G43520 Arabidopsis thaliana HOM05D005425 ORTHO05D006686 8.8e-27 124.8 113 56.6
Manes.16G088201 Manihot esculenta HOM05D005425 ORTHO05D006686 1.5e-26 124.0 106 60.4
C03p67740 Brassica napus HOM05D005425 ORTHO05D006686 2.0e-26 123.6 117 56.4
BolSC21t60236H Brassica oleracea HOM05D005425 ORTHO05D006686 2.0e-26 123.6 117 56.4
A06p26640 Brassica napus HOM05D005425 ORTHO05D006686 2.6e-26 123.2 114 57.0
BraA06t25598Z Brassica rapa HOM05D005425 ORTHO05D006686 2.6e-26 123.2 114 57.0
AUR62026084 Chenopodium quinoa HOM05D005425 ORTHO05D006686 2.6e-26 123.2 108 62.0
AagrBONN_evm.TU.Sc2ySwM_344.3815 Anthoceros agrestis HOM05D005425 ORTHO05D006686 3.3e-26 122.9 102 62.7
AL5G21490 Arabidopsis lyrata HOM05D005425 ORTHO05D006686 3.3e-26 122.9 124 54.0
Carub.0005s0927 Capsella rubella HOM05D005425 ORTHO05D006686 3.3e-26 122.9 113 56.6
CDE05G1879 Ceratophyllum demersum HOM05D005425 ORTHO05D006686 4.4e-26 122.5 97 61.9
BcaB02g10778 Brassica carinata HOM05D005425 ORTHO05D006686 7.5e-26 121.7 108 59.3
Ah.04g151490 Amaranthus hybridus HOM05D005425 ORTHO05D006686 1.7e-25 120.6 108 62.0
CARHR098710 Cardamine hirsuta HOM05D005425 ORTHO05D006686 2.8e-25 119.8 112 57.1
AUR62024499 Chenopodium quinoa HOM05D005425 ORTHO05D006686 2.8e-25 119.8 105 61.9
SMO351G0348 Selaginella moellendorffii HOM05D005425 ORTHO05D006686 3.7e-25 119.4 103 57.3
Aa31LG4G13370 Aethionema arabicum HOM05D005425 ORTHO05D006686 4.8e-25 119.0 108 57.4
BcaC01g02214 Brassica carinata HOM05D005425 ORTHO05D006686 4.8e-25 119.0 166 48.8
QL11p003539 Quercus lobata HOM05D005425 ORTHO05D006686 8.2e-25 118.2 165 43.6
EL10Ac3g07129 Beta vulgaris HOM05D005425 ORTHO05D006686 1.1e-24 117.9 113 57.5
Sc13g0001610 Simmondsia chinensis HOM05D005425 ORTHO05D006686 2.4e-24 116.7 104 60.6
FAN28G1834 Fragaria x ananassa HOM05D005425 ORTHO05D006686 2.7e-23 113.2 297 38.7
SEGI_36327 Sequoiadendron giganteum HOM05D005425 ORTHO05D006686 3.5e-23 112.8 112 53.6
vmacro13523 Vaccinium macrocarpon HOM05D005425 ORTHO05D006686 3.5e-23 112.8 104 58.7
THA.LOC104804448 Tarenaya hassleriana HOM05D005425 ORTHO05D006686 4.5e-23 112.5 108 56.5
Sp5g17760 Schrenkiella parvula HOM05D005425 ORTHO05D006686 3.8e-22 109.4 246 42.3
FAN23G2130 Fragaria x ananassa HOM05D005425 ORTHO05D006686 1.1e-21 107.8 238 40.3
Mapoly0059s0086 Marchantia polymorpha HOM05D005425 ORTHO05D006686 1.2e-20 104.4 95 56.8
Aa31LG5G9560 Aethionema arabicum HOM05D005425 ORTHO05D006686 2.7e-20 103.2 104 52.9
Sp4g06390 Schrenkiella parvula HOM05D005425 ORTHO05D006686 1.0e-19 101.3 104 53.8
BcaB08g35283 Brassica carinata HOM05D005425 ORTHO05D006686 1.8e-19 100.5 104 52.9
CBR_g16036 Chara braunii HOM05D005425 ORTHO05D006686 3.0e-19 99.8 108 50.0
BcaC07g40833 Brassica carinata HOM05D005425 ORTHO05D006686 4.0e-19 99.4 104 51.9
A09p55370 Brassica napus HOM05D000181 ORTHO05D004115 4.0e-19 99.4 104 51.9
C08p38290 Brassica napus HOM05D000181 ORTHO05D004115 4.0e-19 99.4 104 51.9
BolC8t51404H Brassica oleracea HOM05D005425 ORTHO05D006686 4.0e-19 99.4 104 51.9
BraA09t40938Z Brassica rapa HOM05D005425 ORTHO05D006686 4.0e-19 99.4 104 51.9
AT2G26240 Arabidopsis thaliana HOM05D005425 ORTHO05D006686 8.8e-19 98.2 104 51.0
CARHR115050 Cardamine hirsuta HOM05D005425 ORTHO05D006686 1.2e-18 97.8 104 52.9
PGR142G0340 Punica granatum HOM05D005425 ORTHO05D006686 5.7e-18 95.5 110 53.6
AL4G18820 Arabidopsis lyrata HOM05D005425 ORTHO05D006686 9.8e-18 94.7 104 51.0
Carub.0004s0606 Capsella rubella HOM05D005425 ORTHO05D006686 1.3e-17 94.4 104 51.0
Thhalv10002166m.g Eutrema salsugineum HOM05D005425 ORTHO05D006686 2.8e-12 76.6 84 51.2
Oeu020536.1 Olea europaea HOM05D005425 ORTHO05D006686 6.1e-12 75.5 123 44.7
Thhalv10002673m.g Eutrema salsugineum HOM05D005425 ORTHO05D006686 2.8e-09 66.6 81 51.9
C06p06010 Brassica napus HOM05D004888 ORTHO05D005792 1.2e-07 61.2 103 38.8
BolC6t35714H Brassica oleracea HOM05D004888 ORTHO05D005792 1.2e-07 61.2 103 38.8
BraA06t23494Z Brassica rapa HOM05D004888 ORTHO05D005792 1.2e-07 61.2 103 38.8
SGA_v2.0_scaffold8G04307 Striga asiatica HOM05D004888 ORTHO05D005792 1.2e-07 61.2 101 41.6
Nitab4.5_0001393g0120 Nicotiana tabacum HOM05D004888 ORTHO05D005792 1.6e-07 60.8 101 40.6
Solyc10g006310.3 Solanum lycopersicum HOM05D004888 ORTHO05D005792 1.6e-07 60.8 103 40.8
CAN.G1781.4 Capsicum annuum HOM05D004888 ORTHO05D005792 2.0e-07 60.5 103 37.9
Sopen10g002260 Solanum pennellii HOM05D004888 ORTHO05D005792 2.0e-07 60.5 103 40.8
unitig_62.g23280 Utricularia gibba HOM05D004888 ORTHO05D005792 2.0e-07 60.5 99 38.4
A06p02870 Brassica napus HOM05D004888 ORTHO05D005792 2.7e-07 60.1 102 38.2
PGSC0003DMG400014390 Solanum tuberosum HOM05D004888 ORTHO05D005792 2.7e-07 60.1 101 40.6
BcaB07g33513 Brassica carinata HOM05D004888 ORTHO05D005792 3.5e-07 59.7 102 37.3
Zm00001eb432380 Zea mays HOM05D005425 ORTHO05D006686 3.5e-07 59.7 64 54.7
BcaC08g43255 Brassica carinata HOM05D004888 ORTHO05D005792 4.5e-07 59.3 103 36.9
Migut.M01776 Erythranthe guttata HOM05D004888 ORTHO05D005792 5.9e-07 58.9 101 37.6
Gohir.D01G066100 Gossypium hirsutum HOM05D004888 ORTHO05D005792 5.9e-07 58.9 99 37.4
Gorai.002G088000 Gossypium raimondii HOM05D004888 ORTHO05D005792 5.9e-07 58.9 99 37.4
Nitab4.5_0005048g0090 Nicotiana tabacum HOM05D004888 ORTHO05D005792 7.8e-07 58.5 95 40.0
Thecc.07G042500 Theobroma cacao HOM05D004888 ORTHO05D005792 1.0e-06 58.2 101 38.6
CANSAT10G0001 Cannabis sativa HOM05D004888 ORTHO05D005792 2.3e-06 57.0 101 38.6
CANSAT21G1950 Cannabis sativa HOM05D004888 ORTHO05D005792 2.3e-06 57.0 101 38.6
CDE11G1067 Ceratophyllum demersum HOM05D004888 ORTHO05D005792 2.3e-06 57.0 101 35.6
Potri.001G424000 Populus trichocarpa HOM05D004888 ORTHO05D005792 2.3e-06 57.0 101 38.6
Duzib213G0117 Durio zibethinus HOM05D004888 ORTHO05D005792 2.9e-06 56.6 101 37.6
CBR_g50174 Chara braunii HOM05D004888 ORTHO05D005792 3.8e-06 56.2 99 38.4
Gohir.D05G367500 Gossypium hirsutum HOM05D004888 ORTHO05D005792 3.8e-06 56.2 101 37.6
Gorai.009G435100 Gossypium raimondii HOM05D004888 ORTHO05D005792 3.8e-06 56.2 101 37.6
Rhsim06G0216300 Rhododendron simsii HOM05D004888 ORTHO05D005792 3.8e-06 56.2 101 38.6
Potri.011G138100 Populus trichocarpa HOM05D004888 ORTHO05D005792 5.0e-06 55.8 101 38.6
Hma1.2p1_1222F.1_g268220 Hydrangea macrophylla HOM05D004888 ORTHO05D005792 6.6e-06 55.5 101 35.6
Nitab4.5_0003812g0040 Nicotiana tabacum HOM05D004888 ORTHO05D005792 6.6e-06 55.5 103 36.9
PSO541G5647 Papaver somniferum HOM05D004888 ORTHO05D005792 6.6e-06 55.5 101 35.6
PSO675G7988 Papaver somniferum HOM05D004888 ORTHO05D005792 6.6e-06 55.5 101 35.6
Sopen07g032670 Solanum pennellii HOM05D004888 ORTHO05D005792 6.6e-06 55.5 101 37.6
MSTRG.6911 Avicennia marina HOM05D004888 ORTHO05D005792 8.6e-06 55.1 101 34.7
MBI18_g42744_MAGBIO Magnolia biondii HOM05D004888 ORTHO05D005792 8.6e-06 55.1 96 38.5


User provided reference genes

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