Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 8.6e-210 733.4 373 100.0
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.9e-124 449.9 376 66.0
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 9.8e-121 437.6 377 63.9
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 2.1e-115 419.9 349 65.3
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 2.1e-115 419.9 367 63.5
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 2.8e-115 419.5 368 62.8
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 4.0e-114 415.6 341 66.3
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 2.0e-113 413.3 346 64.7
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 7.5e-113 411.4 342 65.2
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 9.8e-113 411.0 371 60.6
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 2.9e-112 409.5 372 61.6
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 2.9e-112 409.5 373 60.3
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 3.7e-112 409.1 365 62.5
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 4.9e-112 408.7 369 61.2
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 1.1e-111 407.5 374 60.4
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 1.8e-111 406.8 342 65.2
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 2.4e-111 406.4 344 64.2
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 2.4e-111 406.4 346 64.7
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 7.0e-111 404.8 343 64.1
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 9.2e-111 404.4 340 65.3
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 9.2e-111 404.4 366 61.7
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.6e-110 403.7 366 62.3
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 2.0e-110 403.3 326 67.5
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 4.6e-110 402.1 362 61.6
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 7.8e-110 401.4 370 60.5
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 7.8e-110 401.4 366 60.9
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 1.3e-109 400.6 366 61.2
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.7e-109 400.2 366 61.5
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 2.3e-109 399.8 368 61.1
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 2.3e-109 399.8 369 58.8
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 2.3e-109 399.8 411 56.7
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 3.0e-109 399.4 342 64.3
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 3.9e-109 399.1 366 60.4
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 5.0e-109 398.7 364 60.4
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 1.5e-108 397.1 366 60.4
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.9e-108 396.7 345 62.6
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 2.5e-108 396.4 343 64.1
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 3.3e-108 396.0 342 61.1
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 3.3e-108 396.0 342 63.7
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 3.3e-108 396.0 375 58.7
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 3.3e-108 396.0 426 55.4
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 4.3e-108 395.6 366 60.9
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 4.3e-108 395.6 366 59.0
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 7.3e-108 394.8 368 59.0
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 7.3e-108 394.8 368 58.4
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 7.3e-108 394.8 364 59.3
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 9.5e-108 394.4 367 59.1
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.6e-107 393.7 368 59.2
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 1.6e-107 393.7 372 59.4
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 2.8e-107 392.9 376 59.6
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 4.7e-107 392.1 364 59.1
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 4.7e-107 392.1 366 57.9
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 8.0e-107 391.3 366 57.9
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 8.0e-107 391.3 254 76.4
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 1.8e-106 390.2 253 76.3
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 2.3e-106 389.8 367 58.6
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 2.3e-106 389.8 364 59.6
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 2.3e-106 389.8 396 54.8
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 3.1e-106 389.4 255 78.0
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 3.1e-106 389.4 366 57.4
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 4.0e-106 389.0 343 63.6
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 4.0e-106 389.0 362 58.8
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 5.2e-106 388.7 344 61.9
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 7.5e-105 384.8 379 58.3
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 7.5e-105 384.8 253 76.7
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 4.9e-104 382.1 372 59.1
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 7.0e-103 378.3 341 60.4
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 2.7e-102 376.3 368 56.8
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 3.5e-102 375.9 344 60.5
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 3.5e-102 375.9 367 57.2
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 6.0e-102 375.2 247 77.3
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 7.8e-102 374.8 369 57.5
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.7e-101 373.6 343 59.8
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 3.9e-101 372.5 344 59.3
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 3.9e-101 372.5 347 59.7
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 5.0e-101 372.1 256 73.8
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 8.6e-101 371.3 347 59.4
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 8.6e-101 371.3 347 59.4
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.1e-100 370.9 347 59.4
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 2.5e-100 369.8 344 59.3
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 4.3e-100 369.0 256 73.0
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 9.5e-100 367.9 347 59.1
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 1.2e-99 367.5 253 73.1
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 4.7e-99 365.5 341 60.4
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 2.3e-98 363.2 229 78.2
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.4e-95 352.1 349 58.2
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 5.1e-93 345.5 366 56.0
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 8.6e-93 344.7 248 68.5
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 4.7e-91 339.0 252 65.9
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 5.2e-90 335.5 251 66.9
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 7.1e-87 325.1 375 51.5
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 4.6e-86 322.4 254 63.0
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 2.3e-85 320.1 213 75.6
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.8e-83 313.2 413 46.0
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 1.5e-81 307.4 331 55.9
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 4.6e-78 295.8 349 52.1
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 6.2e-75 285.4 185 77.8
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 6.2e-75 285.4 198 73.7
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 9.0e-66 255.0 243 60.9
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.2e-63 246.5 158 76.6
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 2.7e-62 243.4 234 58.5
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.9e-60 237.3 153 77.8
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 5.3e-50 202.6 254 47.2
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 6.5e-48 195.7 155 62.6
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 8.5e-48 195.3 323 36.8
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.7e-46 190.3 137 70.8
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 5.9e-41 172.6 127 70.1
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 1.2e-38 164.9 269 38.7
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 6.7e-37 159.1 367 32.4
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.1e-36 158.3 126 65.1
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 4.1e-34 149.8 78 89.7
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 4.5e-33 146.4 84 76.2
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 2.4e-26 124.0 81 71.6
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.4e-26 124.0 77 80.5
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 9.4e-23 112.1 56 91.1
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 2.2e-16 90.9 56 82.1
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 2.2e-16 90.9 64 64.1
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 9.8e-12 75.5 45 68.9
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 1.2e-09 68.6 142 33.1
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 2.8e-06 57.4 30 86.7


User provided reference genes

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