Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32599 Striga asiatica HOM05D007884 ORTHO05D009968 9.9e-290 999.6 573 100.0
MSTRG.1590 Avicennia marina HOM05D007884 ORTHO05D009968 6.3e-119 432.2 467 63.4
Migut.C01368 Erythranthe guttata HOM05D007884 ORTHO05D009968 3.1e-102 376.7 354 70.3
Oeu023202.1 Olea europaea HOM05D007884 ORTHO05D009968 1.1e-78 298.5 423 56.5
Cc11_g04640 Coffea canephora HOM05D007884 ORTHO05D009968 7.6e-72 275.8 497 36.8
CAN.G63.2 Capsicum annuum HOM05D007884 ORTHO05D009968 2.8e-66 257.3 371 54.7
Dinv09394 Davidia involucrata HOM05D007884 ORTHO05D009968 8.1e-66 255.8 382 53.4
PGSC0003DMG400013578 Solanum tuberosum HOM05D007884 ORTHO05D009968 5.3e-65 253.1 374 54.5
QL09p002129 Quercus lobata HOM05D007884 ORTHO05D009968 9.0e-65 252.3 527 34.7
Nitab4.5_0006974g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 2.6e-64 250.8 365 46.8
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 5.8e-64 249.6 364 54.9
Haze_13924 Corylus avellana HOM05D007884 ORTHO05D009968 7.6e-64 249.2 397 44.1
Gorai.001G097200 Gossypium raimondii HOM05D007884 ORTHO05D009968 2.2e-63 247.7 380 48.4
Hma1.2p1_0004F.1_g003780 Hydrangea macrophylla HOM05D007884 ORTHO05D009968 1.1e-62 245.4 495 45.5
Lj9P699T19 Lonicera japonica HOM05D007884 ORTHO05D009968 7.1e-62 242.7 382 52.6
Gohir.D07G090700 Gossypium hirsutum HOM05D007884 ORTHO05D009968 1.2e-61 241.9 380 48.2
Cfa008093 Carpinus fangiana HOM05D007884 ORTHO05D009968 2.1e-61 241.1 534 33.9
Sopen07g021970 Solanum pennellii HOM05D007884 ORTHO05D009968 4.6e-61 240.0 374 52.9
CiPaw.03G016000 Carya illinoinensis HOM05D007884 ORTHO05D009968 1.7e-60 238.0 369 50.7
TAR383G0946 Trochodendron aralioides HOM05D007884 ORTHO05D009968 1.1e-59 235.3 414 47.1
Gohir.A07G085300 Gossypium hirsutum HOM05D007884 ORTHO05D009968 2.5e-59 234.2 374 46.3
Sc26g0002320 Simmondsia chinensis HOM05D007884 ORTHO05D009968 3.6e-58 230.3 369 48.8
Thecc.08G176500 Theobroma cacao HOM05D007884 ORTHO05D009968 1.1e-57 228.8 382 49.2
CANSAT25G3642 Cannabis sativa HOM05D007884 ORTHO05D009968 2.6e-56 224.2 470 38.1
Aqoxy7G02021 Aquilegia oxysepala HOM05D007884 ORTHO05D009968 2.2e-55 221.1 368 45.4
Actinidia29389 Actinidia chinensis HOM05D007884 ORTHO05D009968 1.4e-54 218.4 351 52.7
Duzib177G0356 Durio zibethinus HOM05D007884 ORTHO05D009968 1.4e-54 218.4 382 49.0
Prupe.1G544500 Prunus persica HOM05D007884 ORTHO05D009968 3.2e-54 217.2 529 36.5
ClCG10G005030 Citrullus lanatus HOM05D007884 ORTHO05D009968 7.9e-53 212.6 400 44.8
Sabra19G0086300 Salix brachista HOM05D007884 ORTHO05D009968 7.9e-53 212.6 473 36.8
DCAR_014075 Daucus carota HOM05D007884 ORTHO05D009968 5.1e-52 209.9 370 44.1
Potri.019G075900 Populus trichocarpa HOM05D007884 ORTHO05D009968 5.1e-52 209.9 387 35.9
CsaV3_4G033680 Cucumis sativus L. HOM05D007884 ORTHO05D009968 4.3e-51 206.8 389 44.7
Sed0007017 Sechium edule HOM05D007884 ORTHO05D009968 2.8e-50 204.1 396 34.6
HanXRQChr17g0559001 Helianthus annuus HOM05D007884 ORTHO05D009968 6.2e-50 203.0 373 49.3
Eucgr.F02657 Eucalyptus grandis HOM05D007884 ORTHO05D009968 1.1e-49 202.2 378 47.4
Lsat_1_v5_gn_4_133080 Lactuca sativa HOM05D007884 ORTHO05D009968 9.0e-49 199.1 433 43.4
PSO242G0004 Papaver somniferum HOM05D007884 ORTHO05D009968 1.5e-48 198.4 374 45.7
CSS0033652 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 3.4e-48 197.2 395 47.1
CSS0035845 Camellia sinensis var. sinensis HOM05D007884 ORTHO05D009968 3.4e-48 197.2 395 47.1
Ciclev10019950m.g Citrus clementina HOM05D007884 ORTHO05D009968 7.6e-48 196.1 374 48.9
Nn3g17503 Nelumbo nucifera HOM05D007884 ORTHO05D009968 4.9e-47 193.4 437 42.6
Nn4g26038 Nelumbo nucifera HOM05D007884 ORTHO05D009968 1.1e-46 192.2 423 42.8
TWI75G0081 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 1.4e-46 191.8 543 40.1
MD08G1213200 Malus domestica HOM05D007884 ORTHO05D009968 2.5e-46 191.0 431 45.7
EL10Ac1g01640 Beta vulgaris HOM05D007884 ORTHO05D009968 9.3e-46 189.1 363 47.1
COL.COLO4_22419 Corchorus olitorius HOM05D007884 ORTHO05D009968 1.2e-45 188.7 353 47.3
MELO3C016698.2 Cucumis melo HOM05D007884 ORTHO05D009968 4.3e-43 180.3 330 45.2
AUR62022398 Chenopodium quinoa HOM05D007884 ORTHO05D009968 4.8e-42 176.8 362 46.1
PGR031G2984 Punica granatum HOM05D007884 ORTHO05D009968 1.1e-41 175.6 378 35.4
Lj2g0010779 Lotus japonicus HOM05D007884 ORTHO05D009968 6.9e-41 172.9 371 42.0
Psat1g062080 Pisum sativum HOM05D007884 ORTHO05D009968 6.9e-41 172.9 371 45.3
Ah.05g168770 Amaranthus hybridus HOM05D007884 ORTHO05D009968 2.0e-40 171.4 359 44.0
TWI18G0215 Tripterygium wilfordii HOM05D007884 ORTHO05D009968 7.6e-40 169.5 335 35.8
Cpa.g.sc21.77 Carica papaya HOM05D007884 ORTHO05D009968 2.2e-39 167.9 274 55.5
MBI04_g00944_MAGBIO Magnolia biondii HOM05D007884 ORTHO05D009968 4.9e-39 166.8 210 36.7
HPP92_008446 Vanilla planifolia HOM05D007884 ORTHO05D009968 6.5e-39 166.4 365 44.4
Glyma.19G044700 Glycine max HOM05D007884 ORTHO05D009968 1.0e-36 159.1 366 42.6
Phvul.003G017800 Phaseolus vulgaris HOM05D007884 ORTHO05D009968 5.1e-36 156.8 369 40.7
Lalb_Chr02g0158331 Lupinus albus HOM05D007884 ORTHO05D009968 3.3e-35 154.1 369 43.9
HPP92_008463 Vanilla planifolia HOM05D007884 ORTHO05D009968 9.7e-35 152.5 363 42.4
VMungo1309G1853 Vigna mungo HOM05D007884 ORTHO05D009968 1.3e-34 152.1 369 40.1
RcHm_v2.0_Chr7g0232061 Rosa chinensis HOM05D007884 ORTHO05D009968 6.9e-33 146.4 380 29.5
Manes.18G118701 Manihot esculenta HOM05D007884 ORTHO05D009968 3.4e-32 144.1 281 49.1
FvH4_5g33340 Fragaria vesca HOM05D007884 ORTHO05D009968 1.7e-31 141.7 511 26.6
FAN18G0070 Fragaria x ananassa HOM05D007884 ORTHO05D009968 1.7e-31 141.7 511 26.6
Medtr6g017035 Medicago truncatula HOM05D007884 ORTHO05D009968 2.2e-31 141.4 371 40.4
AUR62043537 Chenopodium quinoa HOM05D007884 ORTHO05D009968 2.9e-31 141.0 292 49.0
Ca_26346_v3 Cicer arietinum L. HOM05D007884 ORTHO05D009968 5.0e-31 140.2 273 32.2
Zm00001eb001440 Zea mays HOM05D007884 ORTHO05D009968 1.1e-30 139.0 376 29.0
ECA232G0955 Erigeron canadensis HOM05D007884 ORTHO05D009968 1.8e-28 131.7 289 48.1
FAN04G3024 Fragaria x ananassa HOM05D007884 ORTHO05D009968 5.1e-28 130.2 392 28.3
CDE04G2395 Ceratophyllum demersum HOM05D007884 ORTHO05D009968 4.3e-27 127.1 256 52.0
FAN08G1312 Fragaria x ananassa HOM05D007884 ORTHO05D009968 2.2e-26 124.8 304 28.6
Atru.chr13.2470 Acer truncatum HOM05D007884 ORTHO05D009968 6.9e-25 119.8 291 48.5
Os03g0119700 Oryza sativa ssp. japonica HOM05D007884 ORTHO05D009968 1.2e-24 119.0 378 25.9
ATR0716G085 Amborella trichopoda HOM05D007884 ORTHO05D009968 1.5e-24 118.6 354 42.4
TPR.G21024 Trifolium pratense HOM05D007884 ORTHO05D009968 1.2e-21 109.0 371 38.8
CAN.G6574.1 Capsicum annuum HOM05D007884 ORTHO05D009968 1.3e-18 99.0 247 51.4
Peaxi162Scf00078g00351 Petunia axillaris HOM05D006237 ORTHO05D002967 3.2e-06 57.8 65 43.1


User provided reference genes

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