Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32591 Striga asiatica HOM05D006690 ORTHO05D008541 1.8e-156 555.8 278 100.0
SGA_v2.0_scaffold24G10633 Striga asiatica HOM05D006690 ORTHO05D008541 7.0e-124 447.6 278 81.7
MSTRG.1587 Avicennia marina HOM05D006690 ORTHO05D008541 4.9e-117 424.9 288 77.4
SalBow7G1428 Salvia bowleyana HOM05D006690 ORTHO05D008541 1.5e-110 403.3 286 72.0
Migut.C01361 Erythranthe guttata HOM05D006690 ORTHO05D008541 4.6e-107 391.7 289 69.9
unitig_8.g4892 Utricularia gibba HOM05D006690 ORTHO05D008541 1.2e-102 377.1 247 76.9
Gohir.A05G252900 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.3e-101 373.6 235 78.3
Gohir.D05G254800 Gossypium hirsutum HOM05D006690 ORTHO05D008541 1.3e-101 373.6 235 78.3
Actinidia23025 Actinidia chinensis HOM05D006690 ORTHO05D008541 1.7e-101 373.2 286 70.6
CSS0006473 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.7e-101 373.2 238 75.6
CSS0045264 Camellia sinensis var. sinensis HOM05D006690 ORTHO05D008541 1.7e-101 373.2 238 75.6
Cfa008102 Carpinus fangiana HOM05D006690 ORTHO05D008541 2.2e-101 372.9 284 67.6
Gorai.009G266300 Gossypium raimondii HOM05D006690 ORTHO05D008541 2.2e-101 372.9 235 78.3
Dinv09402 Davidia involucrata HOM05D006690 ORTHO05D008541 3.8e-101 372.1 289 68.5
GSVIVG01036428001 Vitis vinifera HOM05D006690 ORTHO05D008541 4.9e-101 371.7 237 76.4
Eucgr.F02968 Eucalyptus grandis HOM05D006690 ORTHO05D008541 8.4e-101 370.9 283 68.2
Glyma.01G231900 Glycine max HOM05D006690 ORTHO05D008541 8.4e-101 370.9 233 78.5
Manes.02G208400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.4e-100 370.2 265 70.2
Duzib177G0086 Durio zibethinus HOM05D006690 ORTHO05D008541 2.4e-100 369.4 235 76.2
Lalb_Chr16g0376791 Lupinus albus HOM05D006690 ORTHO05D008541 3.2e-100 369.0 259 73.0
TAR628G1481 Trochodendron aralioides HOM05D006690 ORTHO05D008541 4.2e-100 368.6 237 75.9
MBI06_g35694_MAGBIO Magnolia biondii HOM05D006690 ORTHO05D008541 5.4e-100 368.2 254 72.4
Haze_13934 Corylus avellana HOM05D006690 ORTHO05D008541 1.6e-99 366.7 244 74.2
THA.LOC104800085 Tarenaya hassleriana HOM05D006690 ORTHO05D008541 1.6e-99 366.7 285 67.4
VMungo1215G2418 Vigna mungo HOM05D006690 ORTHO05D008541 1.6e-99 366.7 233 78.5
Hma1.2p1_0442F.1_g153970 Hydrangea macrophylla HOM05D006690 ORTHO05D008541 2.1e-99 366.3 291 68.0
COL.COLO4_14973 Corchorus olitorius HOM05D006690 ORTHO05D008541 3.5e-99 365.5 233 78.5
ClCG08G000730 Citrullus lanatus HOM05D006690 ORTHO05D008541 1.0e-98 364.0 287 66.2
Manes.18G119400 Manihot esculenta HOM05D006690 ORTHO05D008541 1.0e-98 364.0 235 76.6
MELO3C022193.2 Cucumis melo HOM05D006690 ORTHO05D008541 1.7e-98 363.2 237 75.1
PGR042G1281 Punica granatum HOM05D006690 ORTHO05D008541 1.7e-98 363.2 274 67.9
arahy.Tifrunner.gnm1.ann1.PSIH1X Arachis hypogaea HOM05D006690 ORTHO05D008541 2.3e-98 362.8 310 64.5
Cpa.g.sc21.64 Carica papaya HOM05D006690 ORTHO05D008541 2.3e-98 362.8 244 73.8
Sc02g0003840 Simmondsia chinensis HOM05D006690 ORTHO05D008541 2.3e-98 362.8 277 66.8
LjContig00222g0026492 Lotus japonicus HOM05D006690 ORTHO05D008541 3.9e-98 362.1 242 75.6
RcHm_v2.0_Chr2g0123251 Rosa chinensis HOM05D006690 ORTHO05D008541 3.9e-98 362.1 294 66.0
Potri.019G073900 Populus trichocarpa HOM05D006690 ORTHO05D008541 5.1e-98 361.7 263 70.3
Nn5g27416 Nelumbo nucifera HOM05D006690 ORTHO05D008541 8.7e-98 360.9 244 74.6
Oeu023205.1 Olea europaea HOM05D006690 ORTHO05D008541 8.7e-98 360.9 339 61.9
CiPaw.03G016600 Carya illinoinensis HOM05D006690 ORTHO05D008541 1.1e-97 360.5 237 73.0
Thecc.08G174200 Theobroma cacao HOM05D006690 ORTHO05D008541 1.1e-97 360.5 236 75.0
A07p37760 Brassica napus HOM05D006690 ORTHO05D008541 1.9e-97 359.8 238 74.4
BraA07t31340Z Brassica rapa HOM05D006690 ORTHO05D008541 1.9e-97 359.8 238 74.4
Atru.chr13.2467 Acer truncatum HOM05D006690 ORTHO05D008541 2.5e-97 359.4 287 65.9
TWI75G0001 Tripterygium wilfordii HOM05D006690 ORTHO05D008541 2.5e-97 359.4 233 76.4
CANSAT21G2558 Cannabis sativa HOM05D006690 ORTHO05D008541 3.3e-97 359.0 239 74.1
CsaV3_5G040160 Cucumis sativus L. HOM05D006690 ORTHO05D008541 4.3e-97 358.6 237 73.8
Nitab4.5_0004761g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 4.3e-97 358.6 243 75.3
EL10Ac1g01712 Beta vulgaris HOM05D006690 ORTHO05D008541 5.6e-97 358.2 237 75.1
Ca_24481_v3 Cicer arietinum L. HOM05D006690 ORTHO05D008541 7.3e-97 357.8 257 71.6
Nitab4.5_0010632g0010 Nicotiana tabacum HOM05D006690 ORTHO05D008541 9.6e-97 357.5 239 76.2
AUR62043541 Chenopodium quinoa HOM05D006690 ORTHO05D008541 1.3e-96 357.1 237 75.5
Prupe.1G128000 Prunus persica HOM05D006690 ORTHO05D008541 1.3e-96 357.1 249 73.1
MD15G1137600 Malus domestica HOM05D006690 ORTHO05D008541 1.6e-96 356.7 252 72.6
QL09p003717 Quercus lobata HOM05D006690 ORTHO05D008541 2.1e-96 356.3 266 68.8
AUR62022402 Chenopodium quinoa HOM05D006690 ORTHO05D008541 2.8e-96 355.9 237 75.1
Psat0s3069g0040 Pisum sativum HOM05D006690 ORTHO05D008541 3.6e-96 355.5 233 76.0
ATR1089G004 Amborella trichopoda HOM05D006690 ORTHO05D008541 4.8e-96 355.1 206 84.0
AL2G31160 Arabidopsis lyrata HOM05D006690 ORTHO05D008541 4.8e-96 355.1 241 74.3
CAN.G83.1 Capsicum annuum HOM05D006690 ORTHO05D008541 6.2e-96 354.8 235 76.6
CDE05G2117 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.2e-96 354.8 233 76.0
Solyc11g042640.2 Solanum lycopersicum HOM05D006690 ORTHO05D008541 6.2e-96 354.8 238 76.1
PGSC0003DMG400017809 Solanum tuberosum HOM05D006690 ORTHO05D008541 8.1e-96 354.4 238 75.6
Carub.0002s1836 Capsella rubella HOM05D006690 ORTHO05D008541 1.1e-95 354.0 241 72.6
AT1G71500 Arabidopsis thaliana HOM05D006690 ORTHO05D008541 1.4e-95 353.6 235 75.3
Medtr5g008750 Medicago truncatula HOM05D006690 ORTHO05D008541 1.4e-95 353.6 236 73.7
CARHR291180 Cardamine hirsuta HOM05D006690 ORTHO05D008541 1.8e-95 353.2 235 75.3
Cc10_g09110 Coffea canephora HOM05D006690 ORTHO05D008541 1.8e-95 353.2 216 80.6
Sopen11g018800 Solanum pennellii HOM05D006690 ORTHO05D008541 1.8e-95 353.2 238 75.6
Lj9A700T90 Lonicera japonica HOM05D006690 ORTHO05D008541 4.0e-95 352.1 289 65.7
Peaxi162Scf00078g00341 Petunia axillaris HOM05D006690 ORTHO05D008541 4.0e-95 352.1 242 74.4
Sed0015713 Sechium edule HOM05D006690 ORTHO05D008541 4.0e-95 352.1 224 76.3
Sp5g26650 Schrenkiella parvula HOM05D006690 ORTHO05D008541 5.3e-95 351.7 236 73.7
Ah.05g168760 Amaranthus hybridus HOM05D006690 ORTHO05D008541 6.9e-95 351.3 274 66.8
BcaC08g46585 Brassica carinata HOM05D006690 ORTHO05D008541 1.2e-94 350.5 237 73.4
C06p45640 Brassica napus HOM05D006690 ORTHO05D008541 1.2e-94 350.5 237 73.4
Ciclev10021386m.g Citrus clementina HOM05D006690 ORTHO05D008541 1.2e-94 350.5 235 73.6
Thhalv10018960m.g Eutrema salsugineum HOM05D006690 ORTHO05D008541 2.0e-94 349.7 235 74.0
Rhsim12G0004800 Rhododendron simsii HOM05D006690 ORTHO05D008541 2.0e-94 349.7 268 68.3
FAN19G1869 Fragaria x ananassa HOM05D006690 ORTHO05D008541 3.4e-94 349.0 280 65.7
Aa31LG4G9090 Aethionema arabicum HOM05D006690 ORTHO05D008541 5.8e-94 348.2 242 71.1
FAN23G3093 Fragaria x ananassa HOM05D006690 ORTHO05D008541 7.6e-94 347.8 230 74.8
FAN28G2783 Fragaria x ananassa HOM05D006690 ORTHO05D008541 7.6e-94 347.8 230 74.8
FAN26G2368 Fragaria x ananassa HOM05D006690 ORTHO05D008541 2.2e-93 346.3 230 74.3
HanXRQChr04g0102641 Helianthus annuus HOM05D006690 ORTHO05D008541 1.9e-92 343.2 281 65.5
Aqoxy5G00849 Aquilegia oxysepala HOM05D006690 ORTHO05D008541 4.2e-92 342.0 235 73.6
HPP92_019451 Vanilla planifolia HOM05D006690 ORTHO05D008541 5.4e-92 341.7 245 69.0
DCAR_017362 Daucus carota HOM05D006690 ORTHO05D008541 7.1e-92 341.3 237 70.5
Lsat_1_v5_gn_1_25180 Lactuca sativa HOM05D006690 ORTHO05D008541 7.1e-92 341.3 281 63.3
PSO017G7034 Papaver somniferum HOM05D006690 ORTHO05D008541 1.2e-91 340.5 233 71.7
ECA247G0737 Erigeron canadensis HOM05D006690 ORTHO05D008541 1.6e-91 340.1 231 72.7
Sabra19G0085000 Salix brachista HOM05D006690 ORTHO05D008541 1.6e-91 340.1 257 68.1
arahy.Tifrunner.gnm1.ann1.M9KTRI Arachis hypogaea HOM05D006690 ORTHO05D008541 2.7e-91 339.3 315 59.4
PSO170G2989 Papaver somniferum HOM05D006690 ORTHO05D008541 6.0e-91 338.2 233 71.2
Zm00001eb142810 Zea mays HOM05D006690 ORTHO05D008541 3.0e-90 335.9 234 72.6
Phvul.002G035200 Phaseolus vulgaris HOM05D006690 ORTHO05D008541 4.3e-89 332.0 213 77.5
SEGI_25869 Sequoiadendron giganteum HOM05D006690 ORTHO05D008541 1.7e-85 320.1 264 62.1
Os11g0242400 Oryza sativa ssp. japonica HOM05D006690 ORTHO05D008541 1.1e-84 317.4 232 68.1
CDE05G3037 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 6.5e-77 291.6 194 76.3
TPR.G37964 Trifolium pratense HOM05D006690 ORTHO05D008541 1.0e-74 284.3 233 64.4
vmacro22748 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 9.7e-73 277.7 292 56.8
Mapoly0043s0097 Marchantia polymorpha HOM05D006690 ORTHO05D008541 1.6e-72 276.9 255 54.9
SMO139G0118 Selaginella moellendorffii HOM05D006690 ORTHO05D008541 3.7e-72 275.8 202 63.9
Pp3c6_9090 Physcomitrium patens HOM05D006690 ORTHO05D008541 3.4e-70 269.2 240 58.3
Nitab4.5_0003013g0020 Nicotiana tabacum HOM05D006690 ORTHO05D008541 1.3e-69 267.3 209 67.5
FvH4_1g25280 Fragaria vesca HOM05D006690 ORTHO05D008541 4.8e-64 248.8 216 60.6
AagrBONN_evm.TU.Sc2ySwM_228.501 Anthoceros agrestis HOM05D006690 ORTHO05D008541 6.9e-63 245.0 208 59.1
CDE05G1864 Ceratophyllum demersum HOM05D006690 ORTHO05D008541 7.7e-62 241.5 179 68.7
SGA_v2.0_scaffold7G03910 Striga asiatica HOM05D006690 ORTHO05D008541 1.9e-52 210.3 111 92.8
vmacro00956 Vaccinium macrocarpon HOM05D006690 ORTHO05D008541 1.9e-36 157.1 239 43.5
QL09p003724 Quercus lobata HOM05D006690 ORTHO05D008541 1.7e-32 144.1 177 48.6
GSVIVG01034644001 Vitis vinifera HOM05D006690 ORTHO05D008541 1.2e-30 137.9 91 75.8
Cre09.g411200 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D008541 1.6e-30 137.5 188 42.6
MCO14G230 Micromonas commoda HOM05D006690 ORTHO05D008541 2.7e-30 136.7 210 37.1
PRCOL_00001119 Prasinoderma coloniale HOM05D006690 ORTHO05D008541 6.6e-29 132.1 156 41.7
unitig_578.g16121 Utricularia gibba HOM05D006690 ORTHO05D008541 6.8e-26 122.1 130 49.2
QL09p003744 Quercus lobata HOM05D006690 ORTHO05D008541 7.5e-25 118.6 90 67.8
MCO05G575 Micromonas commoda HOM05D006690 ORTHO05D044287 3.2e-07 60.1 75 41.3
Cre02.g093650 Chlamydomonas reinhardtii HOM05D006690 ORTHO05D044287 2.1e-06 57.4 109 32.1


User provided reference genes

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