Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32519 Striga asiatica HOM05D004866 ORTHO05D005716 5.7e-72 274.2 148 100.0
SGA_v2.0_scaffold118G32495 Striga asiatica HOM05D004866 ORTHO05D005716 2.8e-42 175.6 120 82.5
SGA_v2.0_scaffold24G10559 Striga asiatica HOM05D004866 ORTHO05D005716 1.2e-24 117.1 120 57.5
Migut.C01261 Erythranthe guttata HOM05D004866 ORTHO05D005716 3.9e-20 102.1 114 53.5
Lj7C291G3 Lonicera japonica HOM05D004866 ORTHO05D005716 7.3e-19 97.8 119 51.3
SalBow7G0145 Salvia bowleyana HOM05D004866 ORTHO05D005716 7.3e-19 97.8 117 47.9
Cc01_g05780 Coffea canephora HOM05D004866 ORTHO05D005716 8.1e-18 94.4 126 45.2
Oeu021211.1 Olea europaea HOM05D004866 ORTHO05D005716 3.1e-17 92.4 121 45.5
Actinidia02574 Actinidia chinensis HOM05D004866 ORTHO05D005716 6.8e-17 91.3 111 45.0
Dinv15070 Davidia involucrata HOM05D004866 ORTHO05D005716 8.9e-17 90.9 126 42.9
CSS0004253 Camellia sinensis var. sinensis HOM05D004866 ORTHO05D005716 2.0e-16 89.7 121 43.8
Oeu037757.1 Olea europaea HOM05D004866 ORTHO05D005716 4.4e-16 88.6 122 48.4
PGR042G1785 Punica granatum HOM05D004866 ORTHO05D005716 7.5e-16 87.8 128 46.9
MSTRG.1528 Avicennia marina HOM05D004866 ORTHO05D005716 1.7e-15 86.7 114 45.6
Rhsim11G0058000 Rhododendron simsii HOM05D004866 ORTHO05D005716 2.2e-15 86.3 126 42.1
Rhsim11G0058200 Rhododendron simsii HOM05D004866 ORTHO05D005716 2.2e-15 86.3 126 42.1
vmacro12484 Vaccinium macrocarpon HOM05D004866 ORTHO05D005716 2.2e-15 86.3 97 51.5
SalBow1G5438 Salvia bowleyana HOM05D004866 ORTHO05D005716 8.3e-15 84.3 120 45.0
TAR624G1235 Trochodendron aralioides HOM05D004866 ORTHO05D005716 8.3e-15 84.3 115 41.7
MSTRG.22459 Avicennia marina HOM05D004866 ORTHO05D005716 1.1e-14 84.0 121 43.8
PGSC0003DMG400026074 Solanum tuberosum HOM05D004866 ORTHO05D005716 3.2e-14 82.4 129 38.8
TWI34G1187 Tripterygium wilfordii HOM05D004866 ORTHO05D005716 4.1e-14 82.0 120 38.3
TAR628G0891 Trochodendron aralioides HOM05D004866 ORTHO05D005716 5.4e-14 81.6 132 39.4
CAN.G199.2 Capsicum annuum HOM05D004866 ORTHO05D005716 1.2e-13 80.5 129 38.0
SalBow6G2673 Salvia bowleyana HOM05D004866 ORTHO05D005716 1.2e-13 80.5 120 44.2
Sopen06g023810 Solanum pennellii HOM05D004866 ORTHO05D005716 1.2e-13 80.5 129 37.2
DCAR_001057 Daucus carota HOM05D004866 ORTHO05D005716 1.6e-13 80.1 120 43.3
Manes.02G192700 Manihot esculenta HOM05D004866 ORTHO05D005716 2.1e-13 79.7 124 37.9
unitig_0.g2131 Utricularia gibba HOM05D004866 ORTHO05D005716 2.1e-13 79.7 129 41.9
Cfa013842 Carpinus fangiana HOM05D004866 ORTHO05D005716 4.6e-13 78.6 126 40.5
Nitab4.5_0000303g0220 Nicotiana tabacum HOM05D004866 ORTHO05D005716 4.6e-13 78.6 129 38.8
Rhsim06G0094600 Rhododendron simsii HOM05D004866 ORTHO05D005716 4.6e-13 78.6 113 42.5
MBI09_g41429_MAGBIO Magnolia biondii HOM05D004866 ORTHO05D005716 6.0e-13 78.2 123 42.3
Phvul.007G088500 Phaseolus vulgaris HOM05D004866 ORTHO05D005716 6.0e-13 78.2 121 41.3
Cpa.g.sc66.31 Carica papaya HOM05D004866 ORTHO05D005716 7.8e-13 77.8 105 47.6
PSO017G5284 Papaver somniferum HOM05D004866 ORTHO05D005716 7.8e-13 77.8 132 34.8
Nitab4.5_0006657g0010 Nicotiana tabacum HOM05D004866 ORTHO05D005716 1.0e-12 77.4 129 38.0
Haze_22514 Corylus avellana HOM05D004866 ORTHO05D005716 3.0e-12 75.9 126 38.9
Sabra19G0093900 Salix brachista HOM05D004866 ORTHO05D005716 3.0e-12 75.9 117 38.5
CiPaw.08G058600 Carya illinoinensis HOM05D004866 ORTHO05D005716 3.9e-12 75.5 121 38.8
Ciclev10001144m.g Citrus clementina HOM05D004866 ORTHO05D005716 3.9e-12 75.5 122 38.5
MD08G1220700 Malus domestica HOM05D004866 ORTHO05D005716 3.9e-12 75.5 119 34.5
MD09G1249700 Malus domestica HOM05D004866 ORTHO05D005716 3.9e-12 75.5 119 34.5
Thecc.08G185100 Theobroma cacao HOM05D004866 ORTHO05D005716 3.9e-12 75.5 123 37.4
Lj5g0015319 Lotus japonicus HOM05D004866 ORTHO05D005716 5.1e-12 75.1 115 36.5
Eucgr.C02238 Eucalyptus grandis HOM05D004866 ORTHO05D005716 6.6e-12 74.7 126 36.5
Potri.013G111400 Populus trichocarpa HOM05D004866 ORTHO05D005716 6.6e-12 74.7 118 40.7
Potri.019G082400 Populus trichocarpa HOM05D004866 ORTHO05D005716 6.6e-12 74.7 124 36.3
TWI60G1141 Tripterygium wilfordii HOM05D004866 ORTHO05D005716 6.6e-12 74.7 127 40.2
CANSAT25G2412 Cannabis sativa HOM05D004866 ORTHO05D005716 8.6e-12 74.3 121 37.2
Glyma.10G217600 Glycine max HOM05D004866 ORTHO05D005716 1.1e-11 73.9 122 39.3
Peaxi162Scf00268g01017 Petunia axillaris HOM05D004866 ORTHO05D005716 1.1e-11 73.9 125 38.4
VMungo0720G1828 Vigna mungo HOM05D004866 ORTHO05D005716 1.5e-11 73.6 122 38.5
Medtr1g096790 Medicago truncatula HOM05D004866 ORTHO05D005716 1.9e-11 73.2 115 36.5
QL02p033402 Quercus lobata HOM05D004866 ORTHO05D005716 3.3e-11 72.4 127 38.6
Duzib211G0502 Durio zibethinus HOM05D004866 ORTHO05D005716 5.6e-11 71.6 125 37.6
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 7.3e-11 71.2 95 43.2
Gohir.A09G116000 Gossypium hirsutum HOM05D004866 ORTHO05D005716 7.3e-11 71.2 109 36.7
TPR.G15688 Trifolium pratense HOM05D004866 ORTHO05D005716 7.3e-11 71.2 125 38.4
Atru.chr13.1733 Acer truncatum HOM05D004866 ORTHO05D005716 9.5e-11 70.9 95 43.2
MD15G1411400 Malus domestica HOM05D004866 ORTHO05D005716 9.5e-11 70.9 128 35.9
Thecc.08G184800 Theobroma cacao HOM05D004866 ORTHO05D005716 9.5e-11 70.9 125 37.6
Gohir.D09G113100 Gossypium hirsutum HOM05D004866 ORTHO05D005716 1.2e-10 70.5 109 36.7
Prupe.1G557400 Prunus persica HOM05D004866 ORTHO05D005716 1.2e-10 70.5 125 39.2
EL10Ac1g00092 Beta vulgaris HOM05D004866 ORTHO05D005716 2.1e-10 69.7 120 35.0
CDE04G2694 Ceratophyllum demersum HOM05D004866 ORTHO05D005716 2.1e-10 69.7 97 37.1
Nitab4.5_0001579g0120 Nicotiana tabacum HOM05D004866 ORTHO05D005716 2.1e-10 69.7 122 36.9
arahy.Tifrunner.gnm1.ann1.AKH03T Arachis hypogaea HOM05D004866 ORTHO05D005716 2.8e-10 69.3 124 37.1
arahy.Tifrunner.gnm1.ann1.YL670A Arachis hypogaea HOM05D004866 ORTHO05D005716 3.6e-10 68.9 124 37.1
CiPaw.07G160700 Carya illinoinensis HOM05D004866 ORTHO05D005716 3.6e-10 68.9 117 32.5
Lalb_Chr03g0036111 Lupinus albus HOM05D004866 ORTHO05D005716 3.6e-10 68.9 123 36.6
COL.COLO4_38510 Corchorus olitorius HOM05D004866 ORTHO05D005716 6.2e-10 68.2 124 32.3
PGSC0003DMG400027609 Solanum tuberosum HOM05D004866 ORTHO05D005716 6.2e-10 68.2 125 36.8
Duzib211G0074 Durio zibethinus HOM05D004866 ORTHO05D005716 8.1e-10 67.8 123 35.8
Gorai.006G130600 Gossypium raimondii HOM05D004866 ORTHO05D005716 8.1e-10 67.8 109 35.8
Ah.05g178220 Amaranthus hybridus HOM05D004866 ORTHO05D005716 1.1e-09 67.4 120 34.2
ATR0752G218 Amborella trichopoda HOM05D004866 ORTHO05D005716 1.1e-09 67.4 129 36.4
Aqoxy5G02452 Aquilegia oxysepala HOM05D004866 ORTHO05D005716 1.1e-09 67.4 94 36.2
Lalb_Chr06g0161961 Lupinus albus HOM05D004866 ORTHO05D005716 1.1e-09 67.4 113 35.4
Peaxi162Scf01013g00127 Petunia axillaris HOM05D004866 ORTHO05D005716 1.1e-09 67.4 125 36.8
AUR62022699 Chenopodium quinoa HOM05D004866 ORTHO05D005716 1.4e-09 67.0 121 34.7
CAN.G2.14 Capsicum annuum HOM05D004866 ORTHO05D005716 1.8e-09 66.6 125 34.4
ECA247G2093 Erigeron canadensis HOM05D004866 ORTHO05D005716 1.8e-09 66.6 117 39.3
Nitab4.5_0000167g0040 Nicotiana tabacum HOM05D004866 ORTHO05D005716 1.8e-09 66.6 125 36.0
Solyc11g019920.2 Solanum lycopersicum HOM05D004866 ORTHO05D005716 1.8e-09 66.6 116 36.2
Sopen11g010040 Solanum pennellii HOM05D004866 ORTHO05D005716 1.8e-09 66.6 116 36.2
Zm00001eb082680 Zea mays HOM05D004866 ORTHO05D005716 1.8e-09 66.6 96 38.5
AUR62004637 Chenopodium quinoa HOM05D004866 ORTHO05D005716 2.4e-09 66.2 121 33.9
FvH4_5g30970 Fragaria vesca HOM05D004866 ORTHO05D005716 4.0e-09 65.5 127 33.9
FAN18G3952 Fragaria x ananassa HOM05D004866 ORTHO05D005716 4.0e-09 65.5 127 33.9
RcHm_v2.0_Chr7g0226321 Rosa chinensis HOM05D004866 ORTHO05D005716 5.2e-09 65.1 127 34.6
FAN04G1244 Fragaria x ananassa HOM05D004866 ORTHO05D005716 1.5e-08 63.5 127 33.1
FAN04G1967 Fragaria x ananassa HOM05D004866 ORTHO05D005716 1.5e-08 63.5 127 33.1
Lalb_Chr02g0141731 Lupinus albus HOM05D004866 ORTHO05D005716 1.5e-08 63.5 123 33.3
Os04g0432500 Oryza sativa ssp. japonica HOM05D004866 ORTHO05D005716 1.5e-08 63.5 96 36.5
Hund16793 Selenicereus undatus HOM05D004866 ORTHO05D005716 1.5e-08 63.5 106 37.7
THA.LOC104816334 Tarenaya hassleriana HOM05D004866 ORTHO05D005716 1.5e-08 63.5 126 36.5
FAN08G2315 Fragaria x ananassa HOM05D004866 ORTHO05D005716 2.6e-08 62.8 127 33.1
COL.COLO4_23639 Corchorus olitorius HOM05D004866 ORTHO05D005716 3.4e-08 62.4 131 35.9
Migut.N03354 Erythranthe guttata HOM05D004866 ORTHO05D005716 4.4e-08 62.0 96 39.6
FAN13G0537 Fragaria x ananassa HOM05D004866 ORTHO05D005716 4.4e-08 62.0 127 33.1
HPP92_019370 Vanilla planifolia HOM05D004866 ORTHO05D005716 4.4e-08 62.0 95 40.0
GSVIVG01034781001 Vitis vinifera HOM05D004866 ORTHO05D005716 1.7e-07 60.1 59 40.7
MELO3C008127.2 Cucumis melo HOM05D004866 ORTHO05D005716 4.9e-07 58.5 124 33.9
Carub.0001s3321 Capsella rubella HOM05D004866 ORTHO05D005716 6.4e-07 58.2 114 39.5
HanXRQChr02g0044281 Helianthus annuus HOM05D004866 ORTHO05D005716 6.4e-07 58.2 114 37.7
Thhalv10010385m.g Eutrema salsugineum HOM05D004866 ORTHO05D005716 8.4e-07 57.8 125 37.6
Aa31LG6G8820 Aethionema arabicum HOM05D004866 ORTHO05D005716 1.4e-06 57.0 118 36.4
BcaB03g13658 Brassica carinata HOM05D004866 ORTHO05D005716 1.4e-06 57.0 122 37.7
ClCG11G008070 Citrullus lanatus HOM05D004866 ORTHO05D005716 3.2e-06 55.8 123 34.1
CsaV3_2G033540 Cucumis sativus L. HOM05D004866 ORTHO05D005716 3.2e-06 55.8 124 30.6
Sed0018546 Sechium edule HOM05D004866 ORTHO05D005716 4.2e-06 55.5 131 33.6
A05p23590 Brassica napus HOM05D004866 ORTHO05D005716 7.1e-06 54.7 122 36.1
BolC5t32456H Brassica oleracea HOM05D004866 ORTHO05D005716 7.1e-06 54.7 122 36.1
BraA05t21227Z Brassica rapa HOM05D004866 ORTHO05D005716 7.1e-06 54.7 122 36.1
CARHR034420 Cardamine hirsuta HOM05D004866 ORTHO05D005716 7.1e-06 54.7 141 32.6
Gohir.A05G250501 Gossypium hirsutum HOM05D004866 ORTHO05D005716 7.1e-06 54.7 129 31.0
Sp1g30340 Schrenkiella parvula HOM05D004866 ORTHO05D005716 7.1e-06 54.7 123 38.2
BcaC05g27723 Brassica carinata HOM05D004866 ORTHO05D005716 9.2e-06 54.3 122 36.1
C05p37040 Brassica napus HOM05D004866 ORTHO05D005716 9.2e-06 54.3 122 36.1
Gorai.009G263700 Gossypium raimondii HOM05D004866 ORTHO05D005716 9.2e-06 54.3 131 31.3


User provided reference genes

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