Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32494 Striga asiatica HOM05D007524 ORTHO05D009475 4.7e-219 764.2 381 100.0
Migut.C01263 Erythranthe guttata HOM05D007524 ORTHO05D009475 2.2e-112 409.8 345 62.9
Sopen01g004060 Solanum pennellii HOM05D007524 ORTHO05D009475 7.5e-92 341.7 349 53.0
Peaxi162Scf00032g00619 Petunia axillaris HOM05D007524 ORTHO05D009475 8.3e-91 338.2 357 51.3
Solyc01g008520.3 Solanum lycopersicum HOM05D007524 ORTHO05D009475 2.4e-90 336.7 349 52.7
Hma1.2p1_0057F.1_g032020 Hydrangea macrophylla HOM05D007524 ORTHO05D009475 1.2e-86 324.3 344 50.9
Actinidia07457 Actinidia chinensis HOM05D007524 ORTHO05D009475 1.6e-86 323.9 350 50.0
Oeu032986.1 Olea europaea HOM05D007524 ORTHO05D009475 6.1e-86 322.0 309 56.3
Cc00_g05860 Coffea canephora HOM05D007524 ORTHO05D009475 8.8e-85 318.2 352 47.7
Dinv25593 Davidia involucrata HOM05D007524 ORTHO05D009475 2.6e-84 316.6 340 50.0
Nitab4.5_0001747g0050 Nicotiana tabacum HOM05D007524 ORTHO05D009475 6.3e-83 312.0 352 49.4
Nitab4.5_0000825g0060 Nicotiana tabacum HOM05D007524 ORTHO05D009475 5.4e-82 308.9 358 48.9
TAR628G0034 Trochodendron aralioides HOM05D007524 ORTHO05D009475 1.9e-79 300.4 356 47.5
unitig_46.g18111 Utricularia gibba HOM05D007524 ORTHO05D009475 4.2e-79 299.3 347 47.6
Duzib248G0930 Durio zibethinus HOM05D007524 ORTHO05D009475 9.5e-79 298.1 354 45.8
Thecc.02G312000 Theobroma cacao HOM05D007524 ORTHO05D009475 9.5e-79 298.1 354 47.5
Gorai.013G099200 Gossypium raimondii HOM05D007524 ORTHO05D009475 1.2e-76 291.2 358 45.5
Gohir.A13G091600 Gossypium hirsutum HOM05D007524 ORTHO05D009475 2.6e-76 290.0 359 45.1
Sc06g0003090 Simmondsia chinensis HOM05D007524 ORTHO05D009475 4.4e-76 289.3 355 45.9
GSVIVG01022414001 Vitis vinifera HOM05D007524 ORTHO05D009475 4.4e-76 289.3 345 48.4
Rhsim08G0000700 Rhododendron simsii HOM05D007524 ORTHO05D009475 1.7e-75 287.3 334 48.2
PSO017G6978 Papaver somniferum HOM05D007524 ORTHO05D009475 4.9e-75 285.8 358 45.0
AUR62039047 Chenopodium quinoa HOM05D007524 ORTHO05D009475 8.3e-75 285.0 363 45.5
Aqoxy5G02489 Aquilegia oxysepala HOM05D007524 ORTHO05D009475 3.5e-73 279.6 345 43.5
THA.LOC104818453 Tarenaya hassleriana HOM05D007524 ORTHO05D009475 1.0e-72 278.1 354 45.5
Gohir.D13G086900 Gossypium hirsutum HOM05D007524 ORTHO05D009475 2.9e-72 276.6 330 47.0
Atru.chr11.1209 Acer truncatum HOM05D007524 ORTHO05D009475 3.3e-71 273.1 390 41.5
MD16G1006200 Malus domestica HOM05D007524 ORTHO05D009475 7.3e-71 271.9 342 43.6
Haze_11736 Corylus avellana HOM05D007524 ORTHO05D009475 1.2e-70 271.2 401 41.4
Prupe.1G344400 Prunus persica HOM05D007524 ORTHO05D009475 4.7e-70 269.2 335 44.5
RcHm_v2.0_Chr4g0446351 Rosa chinensis HOM05D007524 ORTHO05D009475 8.0e-70 268.5 348 43.1
ECA247G1633 Erigeron canadensis HOM05D007524 ORTHO05D009475 1.0e-69 268.1 349 42.4
Manes.03G082500 Manihot esculenta HOM05D007524 ORTHO05D009475 4.0e-69 266.2 354 42.7
Lj3g0014826 Lotus japonicus HOM05D007524 ORTHO05D009475 6.8e-69 265.4 351 44.7
TPR.G21554 Trifolium pratense HOM05D007524 ORTHO05D009475 6.8e-69 265.4 349 43.0
arahy.Tifrunner.gnm1.ann1.NAL0L4 Arachis hypogaea HOM05D007524 ORTHO05D009475 1.5e-68 264.2 343 46.1
BraA09t36516Z Brassica rapa HOM05D007524 ORTHO05D009475 2.6e-68 263.5 349 43.3
Eucgr.J00844 Eucalyptus grandis HOM05D007524 ORTHO05D009475 2.6e-68 263.5 355 41.7
Medtr4g074200 Medicago truncatula HOM05D007524 ORTHO05D009475 2.6e-68 263.5 349 42.4
PGR119G1695 Punica granatum HOM05D007524 ORTHO05D009475 2.6e-68 263.5 347 42.4
FAN07G0447 Fragaria x ananassa HOM05D007524 ORTHO05D009475 5.8e-68 262.3 348 42.2
Sed0011089 Sechium edule HOM05D007524 ORTHO05D009475 9.8e-68 261.5 344 42.7
arahy.Tifrunner.gnm1.ann1.SSM27G Arachis hypogaea HOM05D007524 ORTHO05D009475 1.3e-67 261.2 343 45.5
A09p08680 Brassica napus HOM05D007524 ORTHO05D009475 1.3e-67 261.2 349 43.0
Lsat_1_v5_gn_1_28521 Lactuca sativa HOM05D007524 ORTHO05D009475 2.2e-67 260.4 343 41.4
BolC9t53889H Brassica oleracea HOM05D007524 ORTHO05D009475 6.4e-67 258.8 350 42.3
Glyma.11G104200 Glycine max HOM05D007524 ORTHO05D009475 1.1e-66 258.1 344 44.2
Thhalv10005594m.g Eutrema salsugineum HOM05D007524 ORTHO05D009475 1.4e-66 257.7 360 41.9
MELO3C020032.2 Cucumis melo HOM05D007524 ORTHO05D009475 1.9e-66 257.3 342 41.8
FAN17G0147 Fragaria x ananassa HOM05D007524 ORTHO05D009475 1.9e-66 257.3 348 41.7
BcaC04g23318 Brassica carinata HOM05D007524 ORTHO05D009475 2.4e-66 256.9 367 40.9
C09p09780 Brassica napus HOM05D007524 ORTHO05D009475 3.2e-66 256.5 350 42.0
VMungo1127G1744 Vigna mungo HOM05D007524 ORTHO05D009475 5.4e-66 255.8 343 43.1
CsaV3_5G013190 Cucumis sativus L. HOM05D007524 ORTHO05D009475 1.6e-65 254.2 343 42.6
AT5G64520 Arabidopsis thaliana HOM05D007524 ORTHO05D009475 6.0e-65 252.3 354 42.4
Carub.0008s2532 Capsella rubella HOM05D007524 ORTHO05D009475 7.8e-65 251.9 356 41.9
FvH4_4g36590 Fragaria vesca HOM05D007524 ORTHO05D009475 1.0e-64 251.5 351 40.7
Lalb_Chr19g0139281 Lupinus albus HOM05D007524 ORTHO05D009475 1.7e-64 250.8 347 45.0
PSO063G3654 Papaver somniferum HOM05D007524 ORTHO05D009475 2.3e-64 250.4 314 45.9
Glyma.12G029200 Glycine max HOM05D007524 ORTHO05D009475 1.1e-63 248.1 343 42.9
BcaB04g19971 Brassica carinata HOM05D007524 ORTHO05D009475 1.5e-63 247.7 352 41.5
Psat7g173160 Pisum sativum HOM05D007524 ORTHO05D009475 1.5e-63 247.7 325 42.5
FAN12G0445 Fragaria x ananassa HOM05D007524 ORTHO05D009475 1.9e-63 247.3 317 42.9
CANSAT11G0990 Cannabis sativa HOM05D007524 ORTHO05D009475 5.6e-63 245.7 282 49.3
ATR0584G209 Amborella trichopoda HOM05D007524 ORTHO05D009475 7.3e-63 245.4 312 45.8
AL8G41910 Arabidopsis lyrata HOM05D007524 ORTHO05D009475 7.3e-63 245.4 377 40.8
CARHR278490 Cardamine hirsuta HOM05D007524 ORTHO05D009475 1.2e-62 244.6 360 41.1
Sp2g27600 Schrenkiella parvula HOM05D007524 ORTHO05D009475 3.6e-62 243.0 373 39.7
HanXRQChr04g0100921 Helianthus annuus HOM05D007524 ORTHO05D009475 6.2e-62 242.3 343 40.8
Aa31LG1G17400 Aethionema arabicum HOM05D007524 ORTHO05D009475 4.4e-60 236.1 363 39.7
EL10Ac4g08947 Beta vulgaris HOM05D007524 ORTHO05D009475 3.2e-58 229.9 437 34.1
vmacro18683 Vaccinium macrocarpon HOM05D007524 ORTHO05D009475 1.3e-56 224.6 304 46.1
Hund06881 Selenicereus undatus HOM05D007524 ORTHO05D009475 2.5e-55 220.3 355 39.4
Zm00001eb146450 Zea mays HOM05D007524 ORTHO05D009475 3.6e-54 216.5 354 38.1
Phvul.011G032400 Phaseolus vulgaris HOM05D007524 ORTHO05D009475 5.2e-53 212.6 274 45.3
Ca_03043_v3 Cicer arietinum L. HOM05D007524 ORTHO05D009475 3.9e-48 196.4 250 44.0
DCAR_013072 Daucus carota HOM05D007524 ORTHO05D009475 1.5e-47 194.5 346 36.7
AUR62004790 Chenopodium quinoa HOM05D007524 ORTHO05D009475 7.3e-47 192.2 354 36.4
CiPaw.06G059700 Carya illinoinensis HOM05D007524 ORTHO05D009475 1.4e-45 188.0 250 43.2
Mapoly0070s0006 Marchantia polymorpha HOM05D007524 ORTHO05D009475 4.0e-45 186.4 354 35.9
SMO367G0885 Selaginella moellendorffii HOM05D007524 ORTHO05D009475 6.0e-41 172.6 361 34.3
Nn5g27870 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.1e-39 168.3 215 44.2
AagrBONN_evm.TU.Sc2ySwM_368.2219 Anthoceros agrestis HOM05D007524 ORTHO05D009475 1.1e-37 161.8 328 34.1
PGSC0003DMG401031484 Solanum tuberosum HOM05D007524 ORTHO05D009475 4.6e-33 146.4 116 62.9
PGSC0003DMG400019097 Solanum tuberosum HOM05D007524 ORTHO05D009475 1.0e-32 145.2 111 63.1
CAN.G821.7 Capsicum annuum HOM05D007524 ORTHO05D009475 1.7e-32 144.4 119 60.5
Nn5g27871 Nelumbo nucifera HOM05D007524 ORTHO05D009475 1.3e-30 138.3 100 69.0
Pp3c1_6220 Physcomitrium patens HOM05D007524 ORTHO05D009475 4.9e-27 126.3 348 31.6
ClCG11G001140 Citrullus lanatus HOM05D007524 ORTHO05D009475 3.2e-26 123.6 100 61.0
COL.COLO4_27673 Corchorus olitorius HOM05D007524 ORTHO05D009475 3.2e-26 123.6 103 58.3
PGSC0003DMG400010497 Solanum tuberosum HOM05D007524 ORTHO05D009475 5.4e-26 122.9 146 47.3
Cpa.g.sc63.24 Carica papaya HOM05D007524 ORTHO05D009475 1.8e-24 117.9 99 59.6
MCO09G042 Micromonas commoda HOM05D007524 ORTHO05D009475 1.4e-13 81.6 381 24.9
CBR_g6685 Chara braunii HOM05D007524 ORTHO05D009475 4.1e-13 80.1 152 36.8
Ah.06g191680 Amaranthus hybridus HOM05D007524 ORTHO05D009475 5.8e-12 76.3 56 69.6
PGSC0003DMG401010496 Solanum tuberosum HOM05D007524 ORTHO05D009475 4.8e-06 56.6 79 40.5


User provided reference genes

Program Settings