Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32440 Striga asiatica HOM05D007182 ORTHO05D008919 2.5e-104 382.1 190 100.0
SGA_v2.0_scaffold24G10509 Striga asiatica HOM05D007182 ORTHO05D008919 6.0e-50 201.4 199 61.3
SGA_v2.0_scaffold28G12033 Striga asiatica HOM05D007182 ORTHO05D008919 5.9e-29 131.7 203 47.8
Migut.N03323 Erythranthe guttata HOM05D007182 ORTHO05D008919 2.3e-25 119.8 189 40.7
MSTRG.1489 Avicennia marina HOM05D007182 ORTHO05D008919 1.6e-23 113.6 154 48.7
SalBow7G0102 Salvia bowleyana HOM05D007182 ORTHO05D008919 6.3e-23 111.7 189 42.9
SalBow7G3005 Salvia bowleyana HOM05D007182 ORTHO05D008919 6.3e-23 111.7 189 42.9
Oeu017862.1 Olea europaea HOM05D007182 ORTHO05D008919 1.2e-21 107.5 178 41.6
Solyc11g013500.1 Solanum lycopersicum HOM05D007182 ORTHO05D008919 4.5e-21 105.5 187 40.1
Sopen11g008530 Solanum pennellii HOM05D007182 ORTHO05D008919 5.9e-21 105.1 187 39.6
PGSC0003DMG400027800 Solanum tuberosum HOM05D007182 ORTHO05D008919 1.1e-19 100.9 190 39.5
Oeu043797.1 Olea europaea HOM05D000316 ORTHO05D008919 1.4e-19 100.5 186 40.3
Oeu043798.1 Olea europaea HOM05D000316 ORTHO05D008919 1.4e-19 100.5 186 40.3
Rhsim06G0109300 Rhododendron simsii HOM05D007182 ORTHO05D008919 7.2e-19 98.2 189 38.1
Cc00_g10670 Coffea canephora HOM05D007182 ORTHO05D008919 1.0e-17 94.4 196 35.7
Manes.18G072600 Manihot esculenta HOM05D007182 ORTHO05D008919 2.3e-17 93.2 193 36.8
Peaxi162Scf00476g00051 Petunia axillaris HOM05D007182 ORTHO05D008919 5.1e-17 92.0 175 37.1
AL1G51080 Arabidopsis lyrata HOM05D007182 ORTHO05D008919 6.7e-17 91.7 179 37.4
Potri.002G089650 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.5e-16 89.7 194 36.1
Hma1.2p1_0221F.1_g093130 Hydrangea macrophylla HOM05D007182 ORTHO05D008919 4.3e-16 89.0 204 38.7
Nitab4.5_0009801g0010 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.3e-15 87.4 162 38.3
Sabra05G0129100 Salix brachista HOM05D007182 ORTHO05D008919 1.3e-15 87.4 194 36.6
Dinv26722 Davidia involucrata HOM05D007182 ORTHO05D008919 1.7e-15 87.0 149 39.6
Duzib041G0557 Durio zibethinus HOM05D007182 ORTHO05D008919 6.3e-15 85.1 189 36.0
Carub.0001s3387 Capsella rubella HOM05D007182 ORTHO05D008919 8.2e-15 84.7 180 36.1
Ciclev10002385m.g Citrus clementina HOM05D007182 ORTHO05D008919 8.2e-15 84.7 225 34.2
CARHR034810 Cardamine hirsuta HOM05D007182 ORTHO05D008919 1.1e-14 84.3 178 34.3
Phvul.009G025900 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 1.1e-14 84.3 209 32.1
Thhalv10004990m.g Eutrema salsugineum HOM05D007182 ORTHO05D008919 4.1e-14 82.4 160 36.2
TAR127G0001 Trochodendron aralioides HOM05D007182 ORTHO05D008919 6.9e-14 81.6 177 34.5
Lj1g0017374 Lotus japonicus HOM05D007182 ORTHO05D008919 9.1e-14 81.3 205 33.2
Manes.02G158600 Manihot esculenta HOM05D007182 ORTHO05D008919 1.2e-13 80.9 191 35.6
Thecc.08G116300 Theobroma cacao HOM05D007182 ORTHO05D008919 1.2e-13 80.9 191 34.6
Glyma.04G253900 Glycine max HOM05D007182 ORTHO05D008919 1.5e-13 80.5 216 33.8
Potri.005G171600 Populus trichocarpa HOM05D007182 ORTHO05D008919 2.6e-13 79.7 190 33.7
Medtr3g073330 Medicago truncatula HOM05D007182 ORTHO05D008919 3.4e-13 79.3 199 30.2
AT1G36940 Arabidopsis thaliana HOM05D007182 ORTHO05D008919 4.5e-13 79.0 159 35.8
CiPaw.05G229300 Carya illinoinensis HOM05D007182 ORTHO05D008919 4.5e-13 79.0 207 32.9
Duzib116G0693 Durio zibethinus HOM05D007182 ORTHO05D008919 4.5e-13 79.0 194 36.6
Phvul.008G168400 Phaseolus vulgaris HOM05D007182 ORTHO05D008919 4.5e-13 79.0 194 33.5
Duzib093G0280 Durio zibethinus HOM05D007182 ORTHO05D008919 5.9e-13 78.6 187 34.2
Glyma.06G108400 Glycine max HOM05D007182 ORTHO05D008919 7.7e-13 78.2 215 33.0
FAN08G1433 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.0e-12 77.8 186 36.0
Nn5g27955 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.0e-12 77.8 212 32.1
FAN13G2785 Fragaria x ananassa HOM05D007182 ORTHO05D008919 1.7e-12 77.0 210 33.3
FAN18G1758 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.2e-12 76.6 186 35.5
TWI36G1401 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.9e-12 76.3 197 34.5
Gohir.A06G040600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 5.0e-12 75.5 196 32.1
Gorai.010G046800 Gossypium raimondii HOM05D007182 ORTHO05D008919 5.0e-12 75.5 198 31.8
Psat5g134040 Pisum sativum HOM05D007182 ORTHO05D008919 5.0e-12 75.5 195 31.8
Atru.chr13.1314 Acer truncatum HOM05D007182 ORTHO05D008919 6.5e-12 75.1 197 33.5
Atru.chr13.1358 Acer truncatum HOM05D007182 ORTHO05D008919 6.5e-12 75.1 197 33.5
FvH4_5g38830 Fragaria vesca HOM05D007182 ORTHO05D008919 6.5e-12 75.1 186 34.9
THA.LOC104806807 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 6.5e-12 75.1 175 34.9
Eucgr.F03740 Eucalyptus grandis HOM05D007182 ORTHO05D008919 8.5e-12 74.7 187 34.2
FAN04G2762 Fragaria x ananassa HOM05D007182 ORTHO05D008919 8.5e-12 74.7 176 35.8
Gohir.D06G041600 Gossypium hirsutum HOM05D007182 ORTHO05D008919 8.5e-12 74.7 198 31.8
RcHm_v2.0_Chr7g0240831 Rosa chinensis HOM05D007182 ORTHO05D008919 1.9e-11 73.6 170 34.1
Medtr5g060450 Medicago truncatula HOM05D007182 ORTHO05D008919 3.2e-11 72.8 160 33.8
TWI56G1442 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 5.5e-11 72.0 198 33.3
Glyma.13G084500 Glycine max HOM05D007182 ORTHO05D008919 7.2e-11 71.6 189 33.3
Gohir.D05G234100 Gossypium hirsutum HOM05D007182 ORTHO05D008919 7.2e-11 71.6 189 32.3
Sabra02G0070600 Salix brachista HOM05D007182 ORTHO05D008919 7.2e-11 71.6 171 36.8
Sc23g0000930 Simmondsia chinensis HOM05D007182 ORTHO05D008919 7.2e-11 71.6 219 35.6
VMungo0647G1564 Vigna mungo HOM05D007182 ORTHO05D008919 9.4e-11 71.2 178 32.6
CiPaw.06G024500 Carya illinoinensis HOM05D007182 ORTHO05D008919 1.2e-10 70.9 213 29.6
TPR.G30417 Trifolium pratense HOM05D007182 ORTHO05D008919 1.2e-10 70.9 194 32.0
Gohir.A05G231800 Gossypium hirsutum HOM05D007182 ORTHO05D008919 1.6e-10 70.5 191 34.0
TAR197G0002 Trochodendron aralioides HOM05D007182 ORTHO05D008919 2.1e-10 70.1 184 32.1
Aa31LG6G9060 Aethionema arabicum HOM05D007182 ORTHO05D008919 2.7e-10 69.7 187 33.7
FAN04G3126 Fragaria x ananassa HOM05D007182 ORTHO05D008919 2.7e-10 69.7 184 33.2
Gorai.009G242300 Gossypium raimondii HOM05D007182 ORTHO05D008919 2.7e-10 69.7 195 31.3
VMungo1309G0514 Vigna mungo HOM05D007182 ORTHO05D008919 3.6e-10 69.3 167 34.1
A05p23400 Brassica napus HOM05D007182 ORTHO05D008919 1.4e-09 67.4 159 32.1
BraA05t21203Z Brassica rapa HOM05D007182 ORTHO05D008919 1.4e-09 67.4 159 32.1
COL.COLO4_21819 Corchorus olitorius HOM05D007182 ORTHO05D008919 1.4e-09 67.4 199 32.7
THA.LOC104813133 Tarenaya hassleriana HOM05D007182 ORTHO05D008919 1.4e-09 67.4 191 31.4
TWI12G0744 Tripterygium wilfordii HOM05D007182 ORTHO05D008919 2.3e-09 66.6 200 32.5
Sp1g31070 Schrenkiella parvula HOM05D007182 ORTHO05D008919 3.9e-09 65.9 134 35.8
TPR.G32946 Trifolium pratense HOM05D007182 ORTHO05D008919 3.9e-09 65.9 198 29.8
Glyma.14G166200 Glycine max HOM05D007182 ORTHO05D008919 5.1e-09 65.5 186 31.7
PGR042G1174 Punica granatum HOM05D007182 ORTHO05D008919 6.7e-09 65.1 209 31.6
DCAR_023125 Daucus carota HOM05D007182 ORTHO05D008919 2.6e-08 63.2 172 32.0
Lalb_Chr10g0102011 Lupinus albus HOM05D007182 ORTHO05D008919 2.6e-08 63.2 201 30.8
TAR628G0731 Trochodendron aralioides HOM05D007182 ORTHO05D008919 3.3e-08 62.8 141 33.3
CsaV3_5G023550 Cucumis sativus L. HOM05D007182 ORTHO05D008919 7.4e-08 61.6 200 31.5
Nitab4.5_0000051g0140 Nicotiana tabacum HOM05D007182 ORTHO05D008919 1.3e-07 60.8 110 39.1
MELO3C022789.2 Cucumis melo HOM05D007182 ORTHO05D008919 1.7e-07 60.5 217 32.7
BcaB03g13641 Brassica carinata HOM05D007182 ORTHO05D008919 2.2e-07 60.1 158 31.6
EL10Ac1g00042 Beta vulgaris HOM05D007182 ORTHO05D008919 2.8e-07 59.7 257 28.8
Sed0021526 Sechium edule HOM05D007182 ORTHO05D008919 6.3e-07 58.5 213 34.3
Lalb_Chr08g0241731 Lupinus albus HOM05D007182 ORTHO05D008919 8.2e-07 58.2 188 27.7
Nn1g08539 Nelumbo nucifera HOM05D007182 ORTHO05D008919 1.1e-06 57.8 133 33.8
ClCG03G009070 Citrullus lanatus HOM05D007182 ORTHO05D008919 1.4e-06 57.4 204 33.8
DCAR_014280 Daucus carota HOM05D007182 ORTHO05D008919 1.8e-06 57.0 158 35.4
Dinv27387 Davidia involucrata HOM05D007182 ORTHO05D008919 2.4e-06 56.6 73 43.8
DCAR_014791 Daucus carota HOM05D007182 ORTHO05D008919 5.3e-06 55.5 152 33.6


User provided reference genes

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