Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold118G32439 Striga asiatica HOM05D007025 ORTHO05D008862 6.2e-58 227.3 115 100.0
unitig_749.g14331 Utricularia gibba HOM05D007025 ORTHO05D008862 2.2e-31 139.0 82 80.5
Ciclev10003169m.g Citrus clementina HOM05D007025 ORTHO05D008862 8.4e-31 137.1 110 65.5
Nitab4.5_0004078g0030 Nicotiana tabacum HOM05D007025 ORTHO05D008862 3.2e-30 135.2 82 78.0
CsaV3_6G031770 Cucumis sativus L. HOM05D007025 ORTHO05D008862 4.2e-30 134.8 82 75.6
Solyc11g066070.2 Solanum lycopersicum HOM05D007025 ORTHO05D008862 4.2e-30 134.8 82 78.0
Sopen11g025810 Solanum pennellii HOM05D007025 ORTHO05D008862 4.2e-30 134.8 82 78.0
PGSC0003DMG400000442 Solanum tuberosum HOM05D007025 ORTHO05D008862 4.2e-30 134.8 82 78.0
Nitab4.5_0001800g0060 Nicotiana tabacum HOM05D007025 ORTHO05D008862 9.3e-30 133.7 82 76.8
CAN.G764.4 Capsicum annuum HOM05D007025 ORTHO05D008862 1.6e-29 132.9 82 76.8
Migut.C01196 Erythranthe guttata HOM05D007025 ORTHO05D008862 1.6e-29 132.9 82 80.5
Peaxi162Scf00406g00059 Petunia axillaris HOM05D007025 ORTHO05D008862 1.6e-29 132.9 82 75.6
MELO3C026555.2 Cucumis melo HOM05D007025 ORTHO05D008862 2.1e-29 132.5 82 75.6
ClCG08G009640 Citrullus lanatus HOM05D007025 ORTHO05D008862 3.5e-29 131.7 82 73.2
Sed0024062 Sechium edule HOM05D007025 ORTHO05D008862 1.0e-28 130.2 82 74.4
Thecc.09G323800 Theobroma cacao HOM05D007025 ORTHO05D008862 1.0e-28 130.2 82 75.6
vmacro00530 Vaccinium macrocarpon HOM05D007025 ORTHO05D008862 1.3e-28 129.8 82 76.8
QL06p002232 Quercus lobata HOM05D007025 ORTHO05D008862 2.3e-28 129.0 83 72.3
Eucgr.J02059 Eucalyptus grandis HOM05D007025 ORTHO05D008862 3.0e-28 128.6 82 76.8
Gohir.A03G041000 Gossypium hirsutum HOM05D007025 ORTHO05D008862 3.9e-28 128.3 82 75.6
Duzib168G1407 Durio zibethinus HOM05D007025 ORTHO05D008862 5.1e-28 127.9 82 75.6
TAR374G1462 Trochodendron aralioides HOM05D007025 ORTHO05D008862 5.1e-28 127.9 82 72.0
EL10Ac7g15997 Beta vulgaris HOM05D007025 ORTHO05D008862 6.7e-28 127.5 82 74.4
CiPaw.09G091100 Carya illinoinensis HOM05D007025 ORTHO05D008862 6.7e-28 127.5 82 74.4
CiPaw.14G069900 Carya illinoinensis HOM05D007025 ORTHO05D008862 6.7e-28 127.5 83 74.7
Gohir.D03G127100 Gossypium hirsutum HOM05D007025 ORTHO05D008862 8.7e-28 127.1 82 74.4
Gorai.003G133500 Gossypium raimondii HOM05D007025 ORTHO05D008862 8.7e-28 127.1 82 74.4
QL10p005425 Quercus lobata HOM05D007025 ORTHO05D008862 8.7e-28 127.1 83 71.1
CSS0049041 Camellia sinensis var. sinensis HOM05D007025 ORTHO05D008862 1.9e-27 125.9 82 72.0
CiPaw.13G095900 Carya illinoinensis HOM05D007025 ORTHO05D008862 2.5e-27 125.6 84 71.4
PGR102G0249 Punica granatum HOM05D007025 ORTHO05D008862 3.3e-27 125.2 82 73.2
Solyc06g076010.3 Solanum lycopersicum HOM05D007025 ORTHO05D008862 3.3e-27 125.2 82 73.2
Sopen06g032420 Solanum pennellii HOM05D007025 ORTHO05D008862 3.3e-27 125.2 82 73.2
Manes.04G033800 Manihot esculenta HOM05D007025 ORTHO05D008862 1.3e-26 123.2 82 69.5
Prupe.6G079900 Prunus persica HOM05D007025 ORTHO05D008862 2.1e-26 122.5 82 70.7
Rhsim09G0044100 Rhododendron simsii HOM05D007025 ORTHO05D008862 3.7e-26 121.7 82 72.0
GSVIVG01024988001 Vitis vinifera HOM05D007025 ORTHO05D008862 3.7e-26 121.7 82 70.7
Hund04979 Selenicereus undatus HOM05D007025 ORTHO05D008862 6.3e-26 120.9 82 72.0
Aqoxy1G00724 Aquilegia oxysepala HOM05D007025 ORTHO05D008862 8.2e-26 120.6 82 70.7
TWI79G0521 Tripterygium wilfordii HOM05D007025 ORTHO05D008862 8.2e-26 120.6 82 68.3
Cc01_g12710 Coffea canephora HOM05D007025 ORTHO05D008862 1.1e-25 120.2 82 69.5
CANSAT54G1063 Cannabis sativa HOM05D007025 ORTHO05D008862 1.4e-25 119.8 82 70.7
arahy.Tifrunner.gnm1.ann1.UND1EB Arachis hypogaea HOM05D007025 ORTHO05D008862 2.4e-25 119.0 82 70.7
AL1G53430 Arabidopsis lyrata HOM05D007025 ORTHO05D008862 4.1e-25 118.2 82 68.3
AT1G47278 Arabidopsis thaliana HOM05D007025 ORTHO05D008862 4.1e-25 118.2 82 68.3
COL.COLO4_20470 Corchorus olitorius HOM05D007025 ORTHO05D008862 4.1e-25 118.2 82 68.3
Haze_24077 Corylus avellana HOM05D007025 ORTHO05D008862 4.1e-25 118.2 103 61.2
Aqoxy7G01971 Aquilegia oxysepala HOM05D007025 ORTHO05D008862 5.3e-25 117.9 82 69.5
arahy.Tifrunner.gnm1.ann1.XVFR0N Arachis hypogaea HOM05D007025 ORTHO05D008862 5.3e-25 117.9 82 69.5
Glyma.05G134100 Glycine max HOM05D007025 ORTHO05D008862 6.9e-25 117.5 82 68.3
SalBow5G5439 Salvia bowleyana HOM05D007025 ORTHO05D008862 6.9e-25 117.5 77 74.0
Cpa.g.sc840.2 Carica papaya HOM05D007025 ORTHO05D008862 9.0e-25 117.1 82 67.1
Cfa003375 Carpinus fangiana HOM05D007025 ORTHO05D008862 9.0e-25 117.1 82 70.7
ATR0800G159 Amborella trichopoda HOM05D007025 ORTHO05D008862 1.2e-24 116.7 80 70.0
Carub.0001s3607 Capsella rubella HOM05D007025 ORTHO05D008862 1.2e-24 116.7 82 65.9
Hma1.2p1_1888F.1_g306550 Hydrangea macrophylla HOM05D007025 ORTHO05D008862 1.2e-24 116.7 82 68.3
Glyma.08G088800 Glycine max HOM05D007025 ORTHO05D008862 2.0e-24 115.9 82 67.1
Lsat_1_v5_gn_2_83821 Lactuca sativa HOM05D007025 ORTHO05D008862 2.0e-24 115.9 82 64.6
Lsat_1_v5_gn_5_79400 Lactuca sativa HOM05D007025 ORTHO05D008862 4.5e-24 114.8 82 63.4
Nn5g26960 Nelumbo nucifera HOM05D007025 ORTHO05D008862 7.6e-24 114.0 83 68.7
THA.LOC104810785 Tarenaya hassleriana HOM05D007025 ORTHO05D008862 1.0e-23 113.6 82 63.4
FvH4_3g35770 Fragaria vesca HOM05D007025 ORTHO05D008862 1.3e-23 113.2 82 69.5
FAN11G3513 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.3e-23 113.2 82 69.5
FAN16G3493 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.3e-23 113.2 82 69.5
FAN25G2181 Fragaria x ananassa HOM05D007025 ORTHO05D008862 1.3e-23 113.2 82 69.5
Aa31sc152G30 Aethionema arabicum HOM05D007025 ORTHO05D008862 1.7e-23 112.8 82 65.9
RcHm_v2.0_Chr5g0006711 Rosa chinensis HOM05D007025 ORTHO05D008862 1.7e-23 112.8 82 69.5
RcHm_v2.0_Chr5g0063941 Rosa chinensis HOM05D007025 ORTHO05D008862 1.7e-23 112.8 82 69.5
Atru.chr3.3859 Acer truncatum HOM05D007025 ORTHO05D008862 2.2e-23 112.5 82 64.6
Thhalv10011908m.g Eutrema salsugineum HOM05D007025 ORTHO05D008862 3.8e-23 111.7 82 65.9
FAN21G1635 Fragaria x ananassa HOM05D007025 ORTHO05D008862 3.8e-23 111.7 82 68.3
PSO384G2653 Papaver somniferum HOM05D007025 ORTHO05D008862 3.8e-23 111.7 84 64.3
Phvul.002G188200 Phaseolus vulgaris HOM05D007025 ORTHO05D008862 3.8e-23 111.7 82 64.6
ECA238G2407 Erigeron canadensis HOM05D007025 ORTHO05D008862 1.9e-22 109.4 82 59.8
CARHR036850 Cardamine hirsuta HOM05D007025 ORTHO05D008862 3.2e-22 108.6 83 65.1
Phvul.007G101100 Phaseolus vulgaris HOM05D007025 ORTHO05D008862 4.2e-22 108.2 82 63.4
BcaB04g17532 Brassica carinata HOM05D007025 ORTHO05D008862 7.2e-22 107.5 82 62.2
CDE11G0504 Ceratophyllum demersum HOM05D007025 ORTHO05D008862 9.3e-22 107.1 82 65.9
BcaC07g37223 Brassica carinata HOM05D007025 ORTHO05D008862 1.6e-21 106.3 82 61.0
A08p05760 Brassica napus HOM05D007025 ORTHO05D008862 1.6e-21 106.3 82 61.0
C08p06430 Brassica napus HOM05D007025 ORTHO05D008862 1.6e-21 106.3 82 61.0
BraA08t32579Z Brassica rapa HOM05D007025 ORTHO05D008862 1.6e-21 106.3 82 61.0
Lj1g0011371 Lotus japonicus HOM05D007025 ORTHO05D008862 1.6e-21 106.3 82 62.2
Lj4g0013158 Lotus japonicus HOM05D007025 ORTHO05D008862 1.6e-21 106.3 82 62.2
Sp1g34420 Schrenkiella parvula HOM05D007025 ORTHO05D008862 1.6e-21 106.3 82 62.2
Medtr4g094750 Medicago truncatula HOM05D007025 ORTHO05D008862 2.1e-21 105.9 82 61.0
Psat7g087480 Pisum sativum HOM05D007025 ORTHO05D008862 2.1e-21 105.9 82 61.0
Lalb_Chr12g0209151 Lupinus albus HOM05D007025 ORTHO05D008862 6.1e-21 104.4 82 63.4
Lalb_Chr12g0209181 Lupinus albus HOM05D007025 ORTHO05D008862 1.0e-20 103.6 82 62.2
Os03g0276700 Oryza sativa ssp. japonica HOM05D007025 ORTHO05D008862 1.5e-19 99.8 80 61.2
Os08g0422300 Oryza sativa ssp. japonica HOM05D007025 ORTHO05D008862 4.3e-19 98.2 80 61.2
unitig_26.g9279 Utricularia gibba HOM05D007025 ORTHO05D008862 5.7e-19 97.8 58 79.3
SHI05954 Sapria himalayana HOM05D007025 ORTHO05D008862 2.8e-18 95.5 79 57.0
TPR.G23830 Trifolium pratense HOM05D007025 ORTHO05D008862 4.8e-18 94.7 80 56.2
SGA_v2.0_scaffold24G10508 Striga asiatica HOM05D007025 ORTHO05D008862 1.1e-17 93.6 65 72.3
MBI05_g06554_MAGBIO Magnolia biondii HOM05D007025 ORTHO05D008862 1.8e-17 92.8 73 58.9
PGSC0003DMG400030317 Solanum tuberosum HOM05D007025 ORTHO05D008862 4.1e-17 91.7 58 72.4
Lj1A680T12 Lonicera japonica HOM05D007025 ORTHO05D008862 1.3e-15 86.7 59 69.5
Potri.009G029400 Populus trichocarpa HOM05D007025 ORTHO05D008862 5.0e-15 84.7 82 52.4
BolC8t47490H Brassica oleracea HOM05D007025 ORTHO05D008862 6.1e-13 77.8 71 52.1
MD11G1111500 Malus domestica HOM05D007025 ORTHO05D008862 6.1e-13 77.8 59 67.8
MD02G1271300 Malus domestica HOM05D007025 ORTHO05D008862 1.0e-12 77.0 59 67.8
HanXRQChr14g0439311 Helianthus annuus HOM05D007025 ORTHO05D008862 5.1e-12 74.7 81 48.1
Mapoly0032s0020 Marchantia polymorpha HOM05D007025 ORTHO05D008862 5.1e-12 74.7 81 48.1
FAN24G0628 Fragaria x ananassa HOM05D007025 ORTHO05D008862 8.8e-12 73.9 59 64.4
AagrBONN_evm.TU.Sc2ySwM_344.5329 Anthoceros agrestis HOM05D007025 ORTHO05D008862 2.0e-11 72.8 78 48.7
AUR62001808 Chenopodium quinoa HOM05D002150 ORTHO05D002191 5.7e-11 71.2 43 74.4
AUR62009594 Chenopodium quinoa HOM05D007025 ORTHO05D002191 5.7e-11 71.2 43 74.4
COL.COLO4_18491 Corchorus olitorius HOM05D007025 ORTHO05D008862 1.1e-09 67.0 78 51.3
Pp3c21_6850 Physcomitrium patens HOM05D007025 ORTHO05D008862 1.8e-09 66.2 81 43.2
SEGI_34612 Sequoiadendron giganteum HOM05D007025 ORTHO05D008862 2.4e-09 65.9 56 50.0
MD02G1271100 Malus domestica HOM05D007025 ORTHO05D008862 1.3e-07 60.1 46 60.9


User provided reference genes

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