Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold117G32418 Striga asiatica HOM05D001662 ORTHO05D007520 1.3e-134 483.0 231 100.0
CAN.G1248.13 Capsicum annuum HOM05D001662 ORTHO05D007520 1.3e-19 100.9 41 97.6
Nitab4.5_0006117g0020 Nicotiana tabacum HOM05D001662 ORTHO05D007520 3.0e-19 99.8 41 95.1
Sp3g04760 Schrenkiella parvula HOM05D001662 ORTHO05D007520 3.0e-19 99.8 41 95.1
Lj4g0014736 Lotus japonicus HOM05D001662 ORTHO05D007520 6.7e-19 98.6 82 52.4
CSS0043752 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 8.7e-19 98.2 43 88.4
Nitab4.5_0002516g0040 Nicotiana tabacum HOM05D001662 ORTHO05D007520 8.7e-19 98.2 50 76.0
MD05G1140700 Malus domestica HOM05D001662 ORTHO05D007520 1.1e-18 97.8 40 95.0
Hund07269 Selenicereus undatus HOM05D001662 ORTHO05D007520 1.1e-18 97.8 48 83.3
SGA_v2.0_scaffold279G46779 Striga asiatica HOM05D001662 ORTHO05D007520 1.1e-18 97.8 40 95.0
TWI36G1680 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 1.1e-18 97.8 40 95.0
AUR62000480 Chenopodium quinoa HOM05D001662 ORTHO05D007520 1.5e-18 97.4 40 95.0
vmacro01666 Vaccinium macrocarpon HOM05D001662 ORTHO05D007520 1.5e-18 97.4 40 95.0
PGSC0003DMG400018281 Solanum tuberosum HOM05D001662 ORTHO05D007520 1.9e-18 97.1 39 97.4
Actinidia01661 Actinidia chinensis HOM05D001662 ORTHO05D007520 2.5e-18 96.7 48 83.3
AL8G16030 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 2.5e-18 96.7 40 92.5
AT3G05870 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 2.5e-18 96.7 40 92.5
Haze_15020 Corylus avellana HOM05D001662 ORTHO05D007520 2.5e-18 96.7 53 75.5
ECA236G3263 Erigeron canadensis HOM05D001662 ORTHO05D007520 2.5e-18 96.7 40 90.0
FAN05G0725 Fragaria x ananassa HOM05D001662 ORTHO05D007520 2.5e-18 96.7 40 92.5
PGR142G3386 Punica granatum HOM05D001662 ORTHO05D007520 2.5e-18 96.7 40 92.5
TWI75G1241 Tripterygium wilfordii HOM05D001662 ORTHO05D007520 2.5e-18 96.7 48 83.3
Ah.06g190750 Amaranthus hybridus HOM05D001662 ORTHO05D007520 3.3e-18 96.3 41 90.2
MD04G1186000 Malus domestica HOM05D001662 ORTHO05D007520 3.3e-18 96.3 40 92.5
Medtr4g007410 Medicago truncatula HOM05D001662 ORTHO05D007520 3.3e-18 96.3 40 92.5
Rhsim11G0105600 Rhododendron simsii HOM05D001662 ORTHO05D007520 3.3e-18 96.3 40 92.5
AL3G16630 Arabidopsis lyrata HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
EL10Ac4g09568 Beta vulgaris HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
CANSAT54G1905 Cannabis sativa HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
CiPaw.01G001400 Carya illinoinensis HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
AUR62006823 Chenopodium quinoa HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Ciclev10006206m.g Citrus clementina HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Cc10_g10070 Coffea canephora HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
DCAR_025400 Daucus carota HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Dinv03875 Davidia involucrata HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Migut.D01691 Erythranthe guttata HOM05D001662 ORTHO05D007520 4.3e-18 95.9 48 81.2
Lj5g0007829 Lotus japonicus HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Nitab4.5_0000081g0250 Nicotiana tabacum HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Nitab4.5_0002572g0010 Nicotiana tabacum HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Oeu061907.1 Olea europaea HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Oeu062794.1 Olea europaea HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Oeu062796.1 Olea europaea HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
Peaxi162Scf00585g00110 Petunia axillaris HOM05D002440 ORTHO05D002576 4.3e-18 95.9 39 94.9
Hund21831 Selenicereus undatus HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
TPR.G14231 Trifolium pratense HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
TPR.G3331 Trifolium pratense HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
GSVIVG01026815001 Vitis vinifera HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
GSVIVG01031335001 Vitis vinifera HOM05D001662 ORTHO05D007520 4.3e-18 95.9 39 94.9
SMO356G0205 Selaginella moellendorffii HOM05D001662 ORTHO05D007520 7.4e-18 95.1 39 89.7
FvH4_6g08560 Fragaria vesca HOM05D001662 ORTHO05D007520 9.6e-18 94.7 39 92.3
FvH4_6g43400 Fragaria vesca HOM05D001662 ORTHO05D007520 9.6e-18 94.7 39 92.3
FAN02G1014 Fragaria x ananassa HOM05D001662 ORTHO05D007520 9.6e-18 94.7 39 92.3
FAN02G1833 Fragaria x ananassa HOM05D001662 ORTHO05D007520 9.6e-18 94.7 39 92.3
FAN09G2109 Fragaria x ananassa HOM05D001662 ORTHO05D007520 9.6e-18 94.7 39 92.3
FAN14G0262 Fragaria x ananassa HOM05D001662 ORTHO05D007520 9.6e-18 94.7 39 92.3
FAN14G1181 Fragaria x ananassa HOM05D001662 ORTHO05D007520 9.6e-18 94.7 39 92.3
Nitab4.5_0001463g0140 Nicotiana tabacum HOM05D001662 ORTHO05D007520 9.6e-18 94.7 40 92.5
RcHm_v2.0_Chr1g0321441 Rosa chinensis HOM05D001662 ORTHO05D007520 9.6e-18 94.7 39 92.3
Sed0008097 Sechium edule HOM05D001662 ORTHO05D007520 9.6e-18 94.7 40 90.0
Aqoxy24s001 Aquilegia oxysepala HOM05D001662 ORTHO05D007520 1.3e-17 94.4 40 87.5
QL03p013942 Quercus lobata HOM05D000001 ORTHO05D000003 1.3e-17 94.4 39 92.3
BcaB05g22003 Brassica carinata HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
BcaB07g29943 Brassica carinata HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
BcaC03g17836 Brassica carinata HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
BcaNung03684 Brassica carinata HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
BcaNung03905 Brassica carinata HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
A02p39060 Brassica napus HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
A06p36930 Brassica napus HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
C02p58680 Brassica napus HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
C07p41570 Brassica napus HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
BolC2t11928H Brassica oleracea HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
BolC7t44690H Brassica oleracea HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
BraA02t08875Z Brassica rapa HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
ClCG09G010060 Citrullus lanatus HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
MELO3C028650.2 Cucumis melo HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
CsaV3_7G024700 Cucumis sativus L. HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
Thhalv10005548m.g Eutrema salsugineum HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
Sed0021388 Sechium edule HOM05D001662 ORTHO05D007520 1.6e-17 94.0 39 92.3
Gorai.013G252500 Gossypium raimondii HOM05D001662 ORTHO05D007520 2.8e-17 93.2 40 90.0
Os03g0302700 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 2.8e-17 93.2 39 89.7
COL.COLO4_04114 Corchorus olitorius HOM05D001662 ORTHO05D007520 3.7e-17 92.8 39 92.3
Duzib170G0793 Durio zibethinus HOM05D001662 ORTHO05D007520 3.7e-17 92.8 39 92.3
Prupe.2G083700 Prunus persica HOM05D001662 ORTHO05D007520 3.7e-17 92.8 39 92.3
unitig_8.g2972 Utricularia gibba HOM05D001662 ORTHO05D007520 8.2e-17 91.7 39 87.2
Os07g0411200 Oryza sativa ssp. japonica HOM05D001662 ORTHO05D007520 1.4e-16 90.9 39 87.2
Lsat_1_v5_gn_5_34581 Lactuca sativa HOM05D001662 ORTHO05D007520 2.4e-16 90.1 38 92.1
THA.LOC104818757 Tarenaya hassleriana HOM05D001662 ORTHO05D007520 2.4e-16 90.1 39 89.7
FAN09G4621 Fragaria x ananassa HOM05D001662 ORTHO05D007520 4.0e-16 89.4 40 82.5
PSO761G0719 Papaver somniferum HOM05D001662 ORTHO05D007520 5.3e-16 89.0 39 87.2
SHI10338 Sapria himalayana HOM05D001662 ORTHO05D007520 5.3e-16 89.0 39 84.6
CSS0010750 Camellia sinensis var. sinensis HOM05D001662 ORTHO05D007520 9.0e-16 88.2 39 84.6
MBI18_g25058_MAGBIO Magnolia biondii HOM05D001662 ORTHO05D007520 1.5e-15 87.4 39 84.6
PSO729G0020 Papaver somniferum HOM05D001662 ORTHO05D007520 5.8e-15 85.5 39 82.1
BraA06t26618Z Brassica rapa HOM05D001662 ORTHO05D007520 3.8e-14 82.8 36 88.9
Medtr7g005900 Medicago truncatula HOM05D001662 ORTHO05D007520 4.2e-13 79.3 32 96.9
Carub.0005s0519 Capsella rubella HOM05D001662 ORTHO05D007520 1.6e-12 77.4 46 71.7
AT5G26640 Arabidopsis thaliana HOM05D001662 ORTHO05D007520 3.9e-11 72.8 40 72.5
SEGI_36157 Sequoiadendron giganteum HOM05D001662 ORTHO05D007520 1.5e-10 70.9 39 66.7
Cre13.g590900 Chlamydomonas reinhardtii HOM05D001662 ORTHO05D007520 1.3e-09 67.8 39 66.7
Cfa026893 Carpinus fangiana HOM05D005041 ORTHO05D006003 4.8e-09 65.9 43 58.1
MCO02G295 Micromonas commoda HOM05D001662 ORTHO05D007520 1.7e-06 57.4 39 61.5
vmacro14356 Vaccinium macrocarpon HOM05D001662 ORTHO05D007520 1.7e-06 57.4 27 81.5


User provided reference genes

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