Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold117G32383 Striga asiatica HOM05D004328 ORTHO05D005210 2.7e-199 698.4 327 100.0
MSTRG.4726 Avicennia marina HOM05D004328 ORTHO05D005210 1.6e-130 469.9 262 80.5
Oeu014856.1 Olea europaea HOM05D004328 ORTHO05D005210 9.5e-128 460.7 237 86.9
SalBow2G3647 Salvia bowleyana HOM05D004328 ORTHO05D005210 9.5e-128 460.7 270 78.5
SalBow2G0585 Salvia bowleyana HOM05D004328 ORTHO05D005210 2.1e-127 459.5 262 80.2
MSTRG.11095 Avicennia marina HOM05D004328 ORTHO05D005210 5.2e-126 454.9 263 79.1
SalBow2G3162 Salvia bowleyana HOM05D004328 ORTHO05D005210 1.2e-125 453.8 274 74.5
Nitab4.5_0003848g0010 Nicotiana tabacum HOM05D004328 ORTHO05D005210 2.6e-125 452.6 235 84.7
CAN.G395.24 Capsicum annuum HOM05D004328 ORTHO05D005210 7.5e-125 451.1 237 84.8
Cc01_g03290 Coffea canephora HOM05D004328 ORTHO05D005210 7.5e-125 451.1 234 85.0
Nitab4.5_0002424g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 9.8e-125 450.7 243 83.1
Sc10g0005470 Simmondsia chinensis HOM05D004328 ORTHO05D005210 2.2e-124 449.5 240 82.1
CAN.G438.47 Capsicum annuum HOM05D004328 ORTHO05D005210 2.8e-124 449.1 262 79.0
PGR102G1437 Punica granatum HOM05D004328 ORTHO05D005210 4.9e-124 448.4 231 85.3
Nitab4.5_0000862g0040 Nicotiana tabacum HOM05D004328 ORTHO05D005210 8.3e-124 447.6 236 84.3
CSS0022667 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.1e-123 447.2 244 80.7
PGSC0003DMG400016515 Solanum tuberosum HOM05D004328 ORTHO05D005210 1.4e-123 446.8 235 83.8
Nitab4.5_0008539g0020 Nicotiana tabacum HOM05D004328 ORTHO05D005210 2.4e-123 446.0 231 84.4
Peaxi162Scf00015g00027 Petunia axillaris HOM05D004328 ORTHO05D005210 5.4e-123 444.9 233 84.1
Sopen03g039300 Solanum pennellii HOM05D004328 ORTHO05D005210 5.4e-123 444.9 234 84.6
Sopen06g025090 Solanum pennellii HOM05D004328 ORTHO05D005210 7.0e-123 444.5 235 82.6
PGSC0003DMG400002634 Solanum tuberosum HOM05D004328 ORTHO05D005210 1.2e-122 443.7 234 84.2
Lj9P505T43 Lonicera japonica HOM05D004328 ORTHO05D005210 2.0e-122 443.0 235 81.7
Oeu022420.1 Olea europaea HOM05D004328 ORTHO05D005210 2.7e-122 442.6 235 83.8
Haze_00368 Corylus avellana HOM05D004328 ORTHO05D005210 1.0e-121 440.7 259 77.2
Solyc06g066800.2 Solanum lycopersicum HOM05D004328 ORTHO05D005210 1.0e-121 440.7 235 82.1
Peaxi162Scf00207g00087 Petunia axillaris HOM05D004328 ORTHO05D005210 1.3e-121 440.3 235 81.7
Actinidia28583 Actinidia chinensis HOM05D004328 ORTHO05D005210 1.7e-121 439.9 242 79.8
Rhsim12G0195900 Rhododendron simsii HOM05D004328 ORTHO05D005210 2.3e-121 439.5 243 80.2
vmacro16940 Vaccinium macrocarpon HOM05D004328 ORTHO05D005210 3.9e-121 438.7 271 73.4
Migut.I00840 Erythranthe guttata HOM05D004328 ORTHO05D005210 5.0e-121 438.3 258 77.1
FAN05G3798 Fragaria x ananassa HOM05D004328 ORTHO05D005210 5.0e-121 438.3 243 79.0
HanXRQChr09g0275421 Helianthus annuus HOM05D004328 ORTHO05D005210 5.0e-121 438.3 253 79.1
EL10Ac9g21975 Beta vulgaris HOM05D004328 ORTHO05D005210 8.6e-121 437.6 242 79.3
AUR62011605 Chenopodium quinoa HOM05D004328 ORTHO05D005210 8.6e-121 437.6 245 79.6
FvH4_6g17800 Fragaria vesca HOM05D004328 ORTHO05D005210 1.1e-120 437.2 243 78.6
MD12G1017300 Malus domestica HOM05D004328 ORTHO05D005210 1.1e-120 437.2 243 80.7
FAN02G3409 Fragaria x ananassa HOM05D004328 ORTHO05D005210 1.5e-120 436.8 243 78.6
Lsat_1_v5_gn_5_129800 Lactuca sativa HOM05D004328 ORTHO05D005210 1.5e-120 436.8 232 82.3
FAN05G2947 Fragaria x ananassa HOM05D004328 ORTHO05D005210 2.5e-120 436.0 243 78.6
Lj5C63T9 Lonicera japonica HOM05D004328 ORTHO05D005210 3.3e-120 435.6 235 81.7
MD14G1015000 Malus domestica HOM05D004328 ORTHO05D005210 3.3e-120 435.6 243 79.8
QL09p020622 Quercus lobata HOM05D004328 ORTHO05D005210 4.3e-120 435.3 232 81.5
arahy.Tifrunner.gnm1.ann1.BXRJ0F Arachis hypogaea HOM05D004328 ORTHO05D005210 5.6e-120 434.9 243 78.2
RcHm_v2.0_Chr3g0472051 Rosa chinensis HOM05D004328 ORTHO05D005210 5.6e-120 434.9 243 78.6
Prupe.7G118400 Prunus persica HOM05D004328 ORTHO05D005210 7.3e-120 434.5 243 79.4
Lsat_1_v5_gn_4_104460 Lactuca sativa HOM05D004328 ORTHO05D005210 1.2e-119 433.7 228 83.3
Hma1.2p1_0682F.1_g202590 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 1.6e-119 433.3 231 80.1
CiPaw.06G036200 Carya illinoinensis HOM05D004328 ORTHO05D005210 6.1e-119 431.4 232 81.9
Hma1.2p1_0317F.1_g123230 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 6.1e-119 431.4 237 79.3
DCAR_007553 Daucus carota HOM05D004328 ORTHO05D005210 8.0e-119 431.0 236 79.7
Ah.01g021090 Amaranthus hybridus HOM05D004738 ORTHO05D006439 1.0e-118 430.6 250 75.2
Eucgr.F02577 Eucalyptus grandis HOM05D004328 ORTHO05D005210 1.4e-118 430.3 228 83.3
Lalb_Chr09g0320061 Lupinus albus HOM05D004328 ORTHO05D005210 1.4e-118 430.3 244 77.5
unitig_744.g24340 Utricularia gibba HOM05D004328 ORTHO05D005210 2.3e-118 429.5 246 77.6
Glyma.01G234500 Glycine max HOM05D004328 ORTHO05D005210 4.0e-118 428.7 232 80.6
Hund00585 Selenicereus undatus HOM05D004328 ORTHO05D005210 4.0e-118 428.7 231 81.4
unitig_21.g20512 Utricularia gibba HOM05D004328 ORTHO05D005210 4.0e-118 428.7 238 78.6
AL2G19530 Arabidopsis lyrata HOM05D004328 ORTHO05D005210 8.9e-118 427.6 238 77.3
Phvul.002G041900 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 8.9e-118 427.6 245 77.1
ECA232G0498 Erigeron canadensis HOM05D004328 ORTHO05D005210 1.2e-117 427.2 228 81.1
Phvul.011G017300 Phaseolus vulgaris HOM05D004328 ORTHO05D005210 1.2e-117 427.2 242 76.9
Glyma.11G008400 Glycine max HOM05D004328 ORTHO05D005210 3.4e-117 425.6 232 79.3
Medtr6g046960 Medicago truncatula HOM05D004328 ORTHO05D005210 3.4e-117 425.6 249 73.5
MELO3C003305.2 Cucumis melo HOM05D004328 ORTHO05D005210 4.4e-117 425.2 243 77.0
TPR.G37879 Trifolium pratense HOM05D004328 ORTHO05D005210 5.8e-117 424.9 244 74.2
CARHR056380 Cardamine hirsuta HOM05D004328 ORTHO05D005210 9.8e-117 424.1 238 76.9
Potri.019G042500 Populus trichocarpa HOM05D004328 ORTHO05D005210 9.8e-117 424.1 241 78.4
TWI60G0134 Tripterygium wilfordii HOM05D004328 ORTHO05D005210 9.8e-117 424.1 232 79.3
Prupe.2G050300 Prunus persica HOM05D004328 ORTHO05D005210 1.3e-116 423.7 238 77.3
VMungo1215G1960 Vigna mungo HOM05D004328 ORTHO05D005210 1.3e-116 423.7 259 72.6
Aa31LG2G2180 Aethionema arabicum HOM05D004328 ORTHO05D005210 1.7e-116 423.3 232 78.4
Sp5g19300 Schrenkiella parvula HOM05D004328 ORTHO05D005210 1.7e-116 423.3 238 76.5
Carub.0002s1013 Capsella rubella HOM05D004328 ORTHO05D005210 2.2e-116 422.9 232 78.4
Medtr5g007050 Medicago truncatula HOM05D004328 ORTHO05D005210 2.2e-116 422.9 232 77.6
AT1G64980 Arabidopsis thaliana HOM05D004328 ORTHO05D005210 2.9e-116 422.5 238 76.5
Ca_24428_v3 Cicer arietinum L. HOM05D004328 ORTHO05D005210 2.9e-116 422.5 231 78.4
Sed0006415 Sechium edule HOM05D004328 ORTHO05D005210 3.7e-116 422.2 232 79.7
Manes.08G160500 Manihot esculenta HOM05D004328 ORTHO05D005210 6.4e-116 421.4 231 80.1
Manes.09G129900 Manihot esculenta HOM05D004328 ORTHO05D005210 6.4e-116 421.4 246 76.4
Duzib177G0674 Durio zibethinus HOM05D004328 ORTHO05D005210 8.3e-116 421.0 226 81.0
THA.LOC104805717 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 8.3e-116 421.0 243 76.1
Thhalv10019022m.g Eutrema salsugineum HOM05D004328 ORTHO05D005210 1.4e-115 420.2 232 77.2
Gohir.D08G240500 Gossypium hirsutum HOM05D004328 ORTHO05D005210 2.4e-115 419.5 226 80.5
Gorai.004G255800 Gossypium raimondii HOM05D004328 ORTHO05D005210 2.4e-115 419.5 226 80.5
Potri.011G117500 Populus trichocarpa HOM05D004328 ORTHO05D005210 2.4e-115 419.5 232 79.7
Psat2g189640 Pisum sativum HOM05D004328 ORTHO05D005210 3.2e-115 419.1 232 75.9
Sed0022403 Sechium edule HOM05D004328 ORTHO05D005210 3.2e-115 419.1 244 76.6
LjContig00222g0018106 Lotus japonicus HOM05D004328 ORTHO05D005210 4.1e-115 418.7 232 78.4
Sabra19G0052600 Salix brachista HOM05D004328 ORTHO05D005210 4.1e-115 418.7 241 78.0
Gohir.A08G221646 Gossypium hirsutum HOM05D004328 ORTHO05D005210 5.4e-115 418.3 226 80.1
PSO063G4889 Papaver somniferum HOM05D004328 ORTHO05D005210 5.4e-115 418.3 236 75.4
Thecc.05G223000 Theobroma cacao HOM05D004328 ORTHO05D005210 5.4e-115 418.3 225 80.0
BraA02t06349Z Brassica rapa HOM05D004328 ORTHO05D005210 7.0e-115 417.9 236 75.0
CANSAT21G1275 Cannabis sativa HOM05D004328 ORTHO05D005210 9.2e-115 417.5 231 76.2
Duzib128G0566 Durio zibethinus HOM05D004328 ORTHO05D005210 9.2e-115 417.5 226 79.6
VMungo1127G1200 Vigna mungo HOM05D004328 ORTHO05D005210 9.2e-115 417.5 233 78.5
A02p12950 Brassica napus HOM05D004328 ORTHO05D005210 1.2e-114 417.2 236 75.0
BcaB05g24072 Brassica carinata HOM05D004328 ORTHO05D005210 1.6e-114 416.8 238 74.8
PSO782G5014 Papaver somniferum HOM05D004328 ORTHO05D005210 2.0e-114 416.4 236 75.8
Atru.chr12.1869 Acer truncatum HOM05D004328 ORTHO05D005210 2.7e-114 416.0 240 76.7
THA.LOC104823797 Tarenaya hassleriana HOM05D004328 ORTHO05D005210 3.5e-114 415.6 228 78.1
Ciclev10032525m.g Citrus clementina HOM05D004328 ORTHO05D005210 6.0e-114 414.8 248 74.2
TAR629G0545 Trochodendron aralioides HOM05D004328 ORTHO05D005210 1.0e-113 414.1 228 78.5
BolC6t38986H Brassica oleracea HOM05D004328 ORTHO05D005210 1.3e-113 413.7 238 75.2
BcaB03g15334 Brassica carinata HOM05D004328 ORTHO05D005210 1.7e-113 413.3 238 75.2
C06p38940 Brassica napus HOM05D004328 ORTHO05D005210 1.7e-113 413.3 238 75.2
Glyma.12G014400 Glycine max HOM05D004328 ORTHO05D005210 1.7e-113 413.3 236 78.0
COL.COLO4_15130 Corchorus olitorius HOM05D004328 ORTHO05D005210 3.0e-113 412.5 225 79.6
C02p21060 Brassica napus HOM05D004328 ORTHO05D005210 3.9e-113 412.1 237 73.8
BraA07t30899Z Brassica rapa HOM05D004328 ORTHO05D005210 5.0e-113 411.8 238 74.4
BcaC03g14669 Brassica carinata HOM05D004328 ORTHO05D005210 6.6e-113 411.4 237 73.8
BolC2t08247H Brassica oleracea HOM05D004328 ORTHO05D005210 6.6e-113 411.4 237 73.8
Sabra11G0102700 Salix brachista HOM05D004328 ORTHO05D005210 8.6e-113 411.0 242 76.0
A07p32730 Brassica napus HOM05D004328 ORTHO05D005210 1.1e-112 410.6 238 74.8
CiPaw.05G212500 Carya illinoinensis HOM05D004328 ORTHO05D005210 1.9e-112 409.8 232 76.7
Carub.0005s0946 Capsella rubella HOM05D004328 ORTHO05D005210 5.6e-112 408.3 232 76.7
HanXRQChr14g0455981 Helianthus annuus HOM05D004328 ORTHO05D005210 7.3e-112 407.9 232 76.3
AUR62016419 Chenopodium quinoa HOM05D004328 ORTHO05D005210 1.6e-111 406.8 220 81.4
Aqoxy7G02544 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 6.2e-111 404.8 239 72.8
CDE02G2329 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 8.0e-111 404.4 238 75.2
Gorai.003G058000 Gossypium raimondii HOM05D004328 ORTHO05D005210 1.1e-110 404.1 233 76.0
Gohir.D03G055200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 1.8e-110 403.3 233 76.0
PSO675G2272 Papaver somniferum HOM05D004328 ORTHO05D005210 1.8e-110 403.3 236 73.3
Gohir.A02G114200 Gossypium hirsutum HOM05D004328 ORTHO05D005210 2.3e-110 402.9 233 75.5
Nn3g21153 Nelumbo nucifera HOM05D004328 ORTHO05D005210 2.3e-110 402.9 230 74.8
BcaB03g15336 Brassica carinata HOM05D004328 ORTHO05D005210 4.0e-110 402.1 238 74.4
PSO384G1513 Papaver somniferum HOM05D004328 ORTHO05D005210 6.8e-110 401.4 244 70.5
MBI04_g30767_MAGBIO Magnolia biondii HOM05D004328 ORTHO05D005210 8.9e-110 401.0 260 68.5
ATR0829G052 Amborella trichopoda HOM05D004328 ORTHO05D005210 1.5e-109 400.2 226 74.3
PSO135G0870 Papaver somniferum HOM05D004328 ORTHO05D005210 1.5e-109 400.2 244 70.1
SHI15002 Sapria himalayana HOM05D004328 ORTHO05D005210 1.5e-109 400.2 229 76.4
ECA234G3285 Erigeron canadensis HOM05D004328 ORTHO05D005210 3.4e-109 399.1 231 76.2
Nn8g40188 Nelumbo nucifera HOM05D004328 ORTHO05D005210 5.8e-109 398.3 224 77.2
PSO384G3958 Papaver somniferum HOM05D004328 ORTHO05D005210 2.2e-108 396.4 244 70.5
PSO502G0015 Papaver somniferum HOM05D004328 ORTHO05D005210 2.2e-108 396.4 236 72.5
Aqoxy3G03943 Aquilegia oxysepala HOM05D004328 ORTHO05D005210 6.4e-108 394.8 227 74.9
CDE06G0667 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 4.1e-107 392.1 233 74.2
unitig_578.g16690 Utricularia gibba HOM05D004328 ORTHO05D005210 5.4e-107 391.7 241 72.2
SEGI_26076 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 6.6e-105 384.8 262 64.9
SEGI_10122 Sequoiadendron giganteum HOM05D004328 ORTHO05D005210 1.1e-104 384.0 227 73.1
HPP92_014971 Vanilla planifolia HOM05D004328 ORTHO05D005210 1.1e-102 377.5 232 71.1
Os07g0413800 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 4.9e-100 368.6 258 65.5
Cpa.g.sc43.145 Carica papaya HOM05D004328 ORTHO05D005210 1.2e-98 364.0 196 80.6
Zm00001eb192470 Zea mays HOM05D004328 ORTHO05D005210 1.5e-96 357.1 232 69.4
Os10g0516400 Oryza sativa ssp. japonica HOM05D004328 ORTHO05D005210 1.4e-94 350.5 238 64.7
SMO118G0121 Selaginella moellendorffii HOM05D004328 ORTHO05D005210 4.0e-94 349.0 223 68.6
AagrBONN_evm.TU.Sc2ySwM_362.571 Anthoceros agrestis HOM05D004328 ORTHO05D005210 1.2e-93 347.4 240 62.9
Zm00001eb062050 Zea mays HOM05D004328 ORTHO05D005210 5.8e-93 345.1 259 61.8
CBR_g51102 Chara braunii HOM05D004328 ORTHO05D005210 3.2e-91 339.3 246 61.4
MD07G1085100 Malus domestica HOM05D004328 ORTHO05D005210 1.6e-82 310.5 226 63.3
GSVIVG01024323001 Vitis vinifera HOM05D004328 ORTHO05D005210 2.7e-82 309.7 163 85.9
Cc04_g03630 Coffea canephora HOM05D004328 ORTHO05D005210 3.0e-81 306.2 156 84.6
Hma1.2p1_0323F.1_g125290 Hydrangea macrophylla HOM05D004328 ORTHO05D005210 3.9e-81 305.8 237 59.9
Solyc03g120410.3 Solanum lycopersicum HOM05D004328 ORTHO05D005210 1.9e-80 303.5 158 84.2
Pp3c20_18260 Physcomitrium patens HOM05D004328 ORTHO05D005210 4.3e-64 249.2 159 67.3
Haze_27513 Corylus avellana HOM05D004328 ORTHO05D005210 2.2e-52 210.3 220 45.9
CSS0035944 Camellia sinensis var. sinensis HOM05D004328 ORTHO05D005210 1.1e-48 198.0 204 51.5
CDE06G1981 Ceratophyllum demersum HOM05D004328 ORTHO05D005210 2.2e-47 193.7 233 43.3
GSVIVG01017160001 Vitis vinifera HOM05D004328 ORTHO05D005210 4.8e-39 166.0 89 83.1
HanXRQChr16g0528931 Helianthus annuus HOM05D004328 ORTHO05D005210 5.2e-33 146.0 107 67.3
CANSAT56G0697 Cannabis sativa HOM05D004328 ORTHO05D005210 2.9e-28 130.2 116 55.2
Actinidia15822 Actinidia chinensis HOM05D004328 ORTHO05D005210 4.4e-24 116.3 134 47.0
Sc12g0009110 Simmondsia chinensis HOM05D004328 ORTHO05D387867 9.1e-14 82.0 51 60.8
Zm00001eb029120 Zea mays HOM05D004328 ORTHO05D442189 2.3e-12 77.4 65 58.5


User provided reference genes

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