Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 5.1e-238 827.4 430 100.0
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 6.2e-103 378.6 348 58.6
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 2.0e-101 373.6 345 58.3
SGA_v2.0_scaffold366G50043 Striga asiatica HOM05D011185 ORTHO05D010595 2.6e-101 373.2 362 55.0
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 2.6e-48 197.2 319 39.8
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 4.2e-43 179.9 342 36.0
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 7.2e-43 179.1 336 37.2
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 6.3e-39 166.0 347 36.3
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 1.6e-37 161.4 373 34.0
SGA_v2.0_scaffold152G36797 Striga asiatica HOM05D011185 ORTHO05D010595 8.6e-36 155.6 307 37.5
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 9.5e-35 152.1 329 35.0
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 2.8e-34 150.6 310 35.8
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 5.9e-29 132.9 232 38.4
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 7.8e-29 132.5 281 36.3
SGA_v2.0_scaffold181G39796 Striga asiatica HOM05D017978 ORTHO05D010595 5.0e-28 129.8 256 36.3
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 6.6e-28 129.4 316 32.9
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 4.7e-26 123.2 334 30.5
SGA_v2.0_scaffold181G39793 Striga asiatica HOM05D017978 ORTHO05D010595 3.1e-25 120.6 256 32.8
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 8.3e-23 112.5 221 35.3
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 4.1e-22 110.2 210 39.5
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 6.0e-21 106.3 290 30.7
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 7.8e-21 105.9 295 28.8
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 1.3e-20 105.1 228 33.3
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 1.3e-20 105.1 221 34.4
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 1.7e-20 104.8 313 28.1
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 2.3e-20 104.4 331 28.1
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 3.9e-20 103.6 221 34.4
SGA_v2.0_scaffold89G27539 Striga asiatica HOM05D011185 ORTHO05D010595 5.0e-20 103.2 280 29.6
SGA_v2.0_scaffold404G51019 Striga asiatica HOM05D011185 ORTHO05D010595 6.6e-20 102.8 148 61.5
SGA_v2.0_scaffold181G39794 Striga asiatica HOM05D017978 ORTHO05D010595 8.6e-20 102.4 282 30.1
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 7.3e-19 99.4 218 30.3
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 6.2e-18 96.3 338 26.9
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 3.4e-16 90.5 202 36.1
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 8.3e-15 85.9 320 26.6
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 1.1e-14 85.5 177 37.3
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.2e-13 82.0 218 30.7
Sopen00g010140 Solanum pennellii HOM05D000007 ORTHO05D000039 3.9e-12 77.0 227 30.8
SGA_v2.0_scaffold186G40188 Striga asiatica HOM05D000007 ORTHO05D010595 3.9e-12 77.0 330 23.9
Solyc04g063415.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.5e-11 74.3 227 30.4
Solyc04g064440.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 2.5e-11 74.3 227 30.4
SGA_v2.0_scaffold7G03938 Striga asiatica HOM05D012911 ORTHO05D010595 2.5e-11 74.3 185 30.8
SGA_v2.0_scaffold1G00265 Striga asiatica HOM05D017978 ORTHO05D010595 7.3e-11 72.8 191 32.5
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.6e-10 71.6 226 28.8
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 2.8e-10 70.9 203 26.1
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.1e-09 68.9 211 29.4
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.3e-09 67.8 207 27.1
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 5.2e-09 66.6 211 27.5
SGA_v2.0_scaffold319G48540 Striga asiatica HOM05D029507 ORTHO05D010595 6.8e-09 66.2 115 37.4
CAN.G2122.5 Capsicum annuum HOM05D000007 ORTHO05D000017 8.9e-09 65.9 222 27.5
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 8.9e-09 65.9 184 26.6
SalBow6G1123 Salvia bowleyana HOM05D012950 ORTHO05D005165 1.2e-08 65.5 269 23.4
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 2.6e-08 64.3 211 26.5
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 2.6e-08 64.3 211 27.0
Ciclev10027004m.g Citrus clementina HOM05D000007 ORTHO05D000039 3.4e-08 63.9 214 23.4
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 5.8e-08 63.2 211 26.1
SGA_v2.0_scaffold223G42883 Striga asiatica HOM05D000002 ORTHO05D000001 5.8e-08 63.2 196 30.1
Cfa000425 Carpinus fangiana HOM05D000007 ORTHO05D000039 7.6e-08 62.8 287 23.0
SalBow1G4017 Salvia bowleyana HOM05D046612 ORTHO05D037496 7.6e-08 62.8 242 25.6
CiPaw.14G019500 Carya illinoinensis HOM05D000007 ORTHO05D000039 9.9e-08 62.4 270 24.1
Lj5A746T19 Lonicera japonica HOM05D000007 ORTHO05D000039 1.3e-07 62.0 195 27.2
unitig_26.g8888 Utricularia gibba HOM05D000007 ORTHO05D000017 1.3e-07 62.0 251 23.5
Ciclev10026927m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.7e-07 61.6 212 25.5
QL08p040450 Quercus lobata HOM05D000007 ORTHO05D000039 2.9e-07 60.8 233 24.0
SGA_v2.0_scaffold319G48536 Striga asiatica HOM05D029507 ORTHO05D010595 3.7e-07 60.5 91 44.0
FAN19G3004 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.9e-07 60.1 112 31.2
SalBow1G0945 Salvia bowleyana HOM05D046612 ORTHO05D037496 4.9e-07 60.1 247 23.9
Thhalv10016886m.g Eutrema salsugineum HOM05D005941 ORTHO05D007879 6.4e-07 59.7 184 28.8
FvH4_1g04511 Fragaria vesca HOM05D000007 ORTHO05D005026 6.4e-07 59.7 85 35.3
Prupe.2G096000 Prunus persica HOM05D003981 ORTHO05D003666 6.4e-07 59.7 142 35.9
Prupe.2G095800 Prunus persica HOM05D003981 ORTHO05D003666 8.4e-07 59.3 160 31.9
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 8.4e-07 59.3 197 28.4
FAN19G0280 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.4e-06 57.8 130 31.5
PSO648G0018 Papaver somniferum HOM05D000007 ORTHO05D000676 2.4e-06 57.8 197 25.9
PSO017G3567 Papaver somniferum HOM05D004049 ORTHO05D004496 4.1e-06 57.0 131 26.7
SGA_v2.0_scaffold208G41986 Striga asiatica HOM05D029507 ORTHO05D000735 4.1e-06 57.0 95 37.9
TAR185G0005 Trochodendron aralioides HOM05D008437 ORTHO05D008819 4.1e-06 57.0 185 27.0
Aqoxy4G02034 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 5.4e-06 56.6 140 32.1
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 5.4e-06 56.6 143 32.9
RcHm_v2.0_Chr5g0060691 Rosa chinensis HOM05D000007 ORTHO05D000017 5.4e-06 56.6 222 24.8
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 9.2e-06 55.8 216 23.1
Hma1.2p1_0270F.1_g108160 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 9.2e-06 55.8 146 27.4
Prupe.1G167900 Prunus persica HOM05D000007 ORTHO05D000521 9.2e-06 55.8 140 28.6


User provided reference genes

Program Settings