Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold117G32314 Striga asiatica HOM05D007920 ORTHO05D009993 6.4e-85 317.4 163 100.0
Migut.D01101 Erythranthe guttata HOM05D007920 ORTHO05D009993 9.4e-36 154.1 116 68.1
MSTRG.9407 Avicennia marina HOM05D007920 ORTHO05D009993 5.2e-34 148.3 116 66.4
Hma1.2p1_0109F.1_g052370 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 4.1e-31 138.7 116 64.7
SalBow6G6899 Salvia bowleyana HOM05D007920 ORTHO05D009993 7.0e-31 137.9 116 61.2
SalBow6G4591 Salvia bowleyana HOM05D007920 ORTHO05D009993 1.6e-30 136.7 116 60.3
Lj5C79G1 Lonicera japonica HOM05D007920 ORTHO05D009993 1.3e-29 133.7 116 63.8
PGSC0003DMG400014190 Solanum tuberosum HOM05D007920 ORTHO05D009993 2.5e-28 129.4 116 60.3
Oeu060125.1 Olea europaea HOM05D007920 ORTHO05D009993 3.3e-28 129.0 116 57.8
Sopen03g035960 Solanum pennellii HOM05D007920 ORTHO05D009993 7.2e-28 127.9 116 60.3
Actinidia36878 Actinidia chinensis HOM05D007920 ORTHO05D009993 3.6e-27 125.6 116 58.6
Rhsim12G0188100 Rhododendron simsii HOM05D007920 ORTHO05D009993 4.0e-26 122.1 116 55.2
Nitab4.5_0012943g0020 Nicotiana tabacum HOM05D007920 ORTHO05D009993 1.2e-25 120.6 116 57.8
Lsat_1_v5_gn_4_87000 Lactuca sativa HOM05D007920 ORTHO05D009993 2.6e-25 119.4 116 56.0
MD17G1221700 Malus domestica HOM05D007920 ORTHO05D009993 2.6e-25 119.4 91 62.6
Prupe.3G096700 Prunus persica HOM05D007920 ORTHO05D009993 5.7e-25 118.2 92 62.0
HanXRQChr09g0274501 Helianthus annuus HOM05D007920 ORTHO05D009993 1.3e-24 117.1 94 58.5
Nitab4.5_0001454g0110 Nicotiana tabacum HOM05D001080 ORTHO05D009993 1.3e-24 117.1 99 61.6
Aqoxy7G03460 Aquilegia oxysepala HOM05D007920 ORTHO05D009993 1.7e-24 116.7 97 59.8
QL05p035351 Quercus lobata HOM05D007920 ORTHO05D009993 6.3e-24 114.8 91 62.6
HanXRQChr05g0154421 Helianthus annuus HOM05D007920 ORTHO05D009993 4.1e-23 112.1 94 57.4
RcHm_v2.0_Chr2g0133221 Rosa chinensis HOM05D007920 ORTHO05D009993 4.1e-23 112.1 94 57.4
CARHR016410 Cardamine hirsuta HOM05D007920 ORTHO05D009993 7.0e-23 111.3 114 50.9
Thecc.06G039600 Theobroma cacao HOM05D007920 ORTHO05D009993 7.0e-23 111.3 110 54.5
Gorai.006G107000 Gossypium raimondii HOM05D007920 ORTHO05D009993 1.6e-22 110.2 116 54.3
Gohir.D09G090800 Gossypium hirsutum HOM05D007920 ORTHO05D009993 2.0e-22 109.8 116 54.3
Nn8g39812 Nelumbo nucifera HOM05D007920 ORTHO05D009993 2.0e-22 109.8 102 54.9
TAR383G1062 Trochodendron aralioides HOM05D007920 ORTHO05D009993 2.0e-22 109.8 116 51.7
AL1G28072 Arabidopsis lyrata HOM05D007920 ORTHO05D009993 3.5e-22 109.0 100 54.0
AT1G15900 Arabidopsis thaliana HOM05D007920 ORTHO05D009993 3.5e-22 109.0 100 54.0
THA.LOC104808181 Tarenaya hassleriana HOM05D007920 ORTHO05D009993 3.5e-22 109.0 110 52.7
CSS0007854 Camellia sinensis var. sinensis HOM05D007920 ORTHO05D009993 4.5e-22 108.6 87 65.5
CiPaw.01G253600 Carya illinoinensis HOM05D007920 ORTHO05D009993 4.5e-22 108.6 88 62.5
Thhalv10009838m.g Eutrema salsugineum HOM05D007920 ORTHO05D009993 4.5e-22 108.6 108 54.6
Cc04_g04970 Coffea canephora HOM05D007920 ORTHO05D009993 5.9e-22 108.2 116 49.1
Gohir.A09G090800 Gossypium hirsutum HOM05D007920 ORTHO05D009993 5.9e-22 108.2 116 53.4
MELO3C017832.2 Cucumis melo HOM05D007920 ORTHO05D009993 7.8e-22 107.8 90 58.9
Cpa.g.sc10.92 Carica papaya HOM05D007920 ORTHO05D009993 1.0e-21 107.5 91 59.3
CANSAT56G1317 Cannabis sativa HOM05D007920 ORTHO05D009993 1.3e-21 107.1 121 48.8
Sp1g14205 Schrenkiella parvula HOM05D007920 ORTHO05D009993 1.3e-21 107.1 108 50.9
BraA06t24364Z Brassica rapa HOM05D000537 ORTHO05D000415 1.7e-21 106.7 95 54.7
Duzib192G0651 Durio zibethinus HOM05D007920 ORTHO05D009993 1.7e-21 106.7 95 56.8
C05p14120 Brassica napus HOM05D000537 ORTHO05D000415 2.3e-21 106.3 121 48.8
BolC5t30143H Brassica oleracea HOM05D000537 ORTHO05D000415 2.3e-21 106.3 121 48.8
FAN09G3519 Fragaria x ananassa HOM05D007920 ORTHO05D009993 2.3e-21 106.3 92 56.5
ClCG00G003920 Citrullus lanatus HOM05D007920 ORTHO05D009993 2.9e-21 105.9 123 47.2
unitig_736.g22804 Utricularia gibba HOM05D000537 ORTHO05D000776 2.9e-21 105.9 89 58.4
FvH4_6g28800 Fragaria vesca HOM05D007920 ORTHO05D009993 3.9e-21 105.5 92 55.4
Sed0007883 Sechium edule HOM05D001994 ORTHO05D001954 3.9e-21 105.5 107 51.4
Aa31LG7G480 Aethionema arabicum HOM05D007920 ORTHO05D009993 5.0e-21 105.1 110 50.0
ClCG07G012110 Citrullus lanatus HOM05D007920 ORTHO05D009993 5.0e-21 105.1 97 54.6
FAN05G5030 Fragaria x ananassa HOM05D007920 ORTHO05D009993 5.0e-21 105.1 92 55.4
CsaV3_4G002040 Cucumis sativus L. HOM05D001994 ORTHO05D001954 6.6e-21 104.8 90 56.7
FAN02G0847 Fragaria x ananassa HOM05D007920 ORTHO05D009993 6.6e-21 104.8 92 55.4
ECA232G4957 Erigeron canadensis HOM05D007920 ORTHO05D009993 1.1e-20 104.0 89 55.1
Sabra01G0032500 Salix brachista HOM05D001994 ORTHO05D001954 1.1e-20 104.0 96 53.1
A06p11940 Brassica napus HOM05D000537 ORTHO05D000415 1.5e-20 103.6 95 53.7
Carub.0001s1570 Capsella rubella HOM05D007920 ORTHO05D009993 1.9e-20 103.2 93 53.8
Cfa000225 Carpinus fangiana HOM05D007920 ORTHO05D009993 1.9e-20 103.2 112 49.1
SHI00232 Sapria himalayana HOM05D007920 ORTHO05D009993 3.3e-20 102.4 128 44.5
Ca_01022_v3 Cicer arietinum L. HOM05D007920 ORTHO05D009993 4.3e-20 102.1 108 48.1
Manes.11G065050 Manihot esculenta HOM05D007920 ORTHO05D009993 4.3e-20 102.1 88 58.0
Medtr2g104930 Medicago truncatula HOM05D007920 ORTHO05D009993 4.3e-20 102.1 100 49.0
Potri.001G046900 Populus trichocarpa HOM05D007920 ORTHO05D009993 4.3e-20 102.1 94 53.2
TWI12G0021 Tripterygium wilfordii HOM05D007920 ORTHO05D009993 5.6e-20 101.7 90 56.7
PGR031G3888 Punica granatum HOM05D007920 ORTHO05D009993 7.3e-20 101.3 90 56.7
Lalb_Chr24g0395321 Lupinus albus HOM05D007920 ORTHO05D009993 9.5e-20 100.9 109 50.5
Psat5g304800 Pisum sativum HOM05D007920 ORTHO05D009993 1.6e-19 100.1 100 48.0
Lj3g0004979 Lotus japonicus HOM05D007920 ORTHO05D009993 2.8e-19 99.4 100 52.0
Lalb_Chr14g0374051 Lupinus albus HOM05D007920 ORTHO05D009993 4.7e-19 98.6 101 54.5
Ciclev10026801m.g Citrus clementina HOM05D007920 ORTHO05D009993 6.1e-19 98.2 109 51.4
ATR0559G078 Amborella trichopoda HOM05D007920 ORTHO05D009993 2.3e-18 96.3 92 50.0
Sc12g0008420 Simmondsia chinensis HOM05D007920 ORTHO05D009993 2.3e-18 96.3 103 45.6
VMungo1080G1626 Vigna mungo HOM05D007920 ORTHO05D009993 2.3e-18 96.3 120 46.7
HPP92_000037 Vanilla planifolia HOM05D001122 ORTHO05D001877 8.9e-18 94.4 99 47.5
Phvul.005G182500 Phaseolus vulgaris HOM05D007920 ORTHO05D009993 2.0e-17 93.2 120 45.0
Glyma.15G004000 Glycine max HOM05D007920 ORTHO05D009993 5.8e-17 91.7 117 44.4
FAN14G5942 Fragaria x ananassa HOM05D007920 ORTHO05D009993 2.2e-16 89.7 93 49.5
arahy.Tifrunner.gnm1.ann1.D8WECR Arachis hypogaea HOM05D007920 ORTHO05D009993 8.3e-16 87.8 104 45.2
Ah.01g006840 Amaranthus hybridus HOM05D007920 ORTHO05D009993 1.2e-14 84.0 113 43.4
Sc02g0006940 Simmondsia chinensis HOM05D007920 ORTHO05D009993 2.0e-14 83.2 96 43.8
TPR.G36324 Trifolium pratense HOM05D007920 ORTHO05D009993 1.1e-12 77.4 87 44.8
Zm00001eb278260 Zea mays HOM05D007920 ORTHO05D009993 1.5e-12 77.0 83 49.4
COL.COLO4_26676 Corchorus olitorius HOM05D007920 ORTHO05D009993 1.9e-12 76.6 86 52.3
SEGI_11378 Sequoiadendron giganteum HOM05D007920 ORTHO05D009993 5.6e-12 75.1 94 42.6
Mapoly0046s0029 Marchantia polymorpha HOM05D007920 ORTHO05D009993 1.1e-10 70.9 87 46.0
MD16G1196200 Malus domestica HOM05D007920 ORTHO05D009993 1.8e-10 70.1 61 54.1
Hma1.2p1_0586F.1_g183770 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 3.2e-07 59.3 72 51.4


User provided reference genes

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