Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold116G32301 Striga asiatica HOM05D000029 ORTHO05D008567 1.2e-62 243.0 124 100.0
SGA_v2.0_scaffold69G23090 Striga asiatica HOM05D000029 ORTHO05D008567 1.6e-19 99.8 89 61.8
MSTRG.19885 Avicennia marina HOM05D000029 ORTHO05D008567 1.2e-09 67.0 87 49.4
Ah.13g076170 Amaranthus hybridus HOM05D000029 ORTHO05D008567 7.5e-09 64.3 88 43.2
Actinidia09366 Actinidia chinensis HOM05D000029 ORTHO05D008567 9.8e-09 63.9 85 47.1
Migut.J01792 Erythranthe guttata HOM05D000029 ORTHO05D008567 1.3e-08 63.5 84 46.4
Hma1.2p1_0376F.1_g139220 Hydrangea macrophylla HOM05D000029 ORTHO05D008567 1.7e-08 63.2 88 44.3
Dinv18096 Davidia involucrata HOM05D000029 ORTHO05D008567 2.2e-08 62.8 88 45.5
Dinv24116 Davidia involucrata HOM05D000029 ORTHO05D008567 2.8e-08 62.4 88 44.3
SalBow6G1511 Salvia bowleyana HOM05D000029 ORTHO05D008567 2.8e-08 62.4 89 43.8
AUR62024381 Chenopodium quinoa HOM05D000029 ORTHO05D008567 8.3e-08 60.8 88 43.2
COL.COLO4_28714 Corchorus olitorius HOM05D000029 ORTHO05D008567 1.4e-07 60.1 86 46.5
Nitab4.5_0000603g0020 Nicotiana tabacum HOM05D000029 ORTHO05D008567 1.8e-07 59.7 87 43.7
Rhsim03G0011500 Rhododendron simsii HOM05D000029 ORTHO05D008567 1.8e-07 59.7 85 43.5
Ciclev10004276m.g Citrus clementina HOM05D000029 ORTHO05D008567 2.4e-07 59.3 88 44.3
Nitab4.5_0000452g0160 Nicotiana tabacum HOM05D000029 ORTHO05D008567 2.4e-07 59.3 87 43.7
TAR633G0185 Trochodendron aralioides HOM05D000029 ORTHO05D008567 2.4e-07 59.3 88 43.2
CAN.G329.4 Capsicum annuum HOM05D000029 ORTHO05D008567 3.1e-07 58.9 87 42.5
AUR62025974 Chenopodium quinoa HOM05D000029 ORTHO05D008567 3.1e-07 58.9 88 42.0
Haze_19921 Corylus avellana HOM05D000029 ORTHO05D008567 3.1e-07 58.9 83 44.6
Thecc.05G164700 Theobroma cacao HOM05D000029 ORTHO05D008567 3.1e-07 58.9 85 45.9
Atru.chr1.966 Acer truncatum HOM05D000029 ORTHO05D008567 4.1e-07 58.5 88 42.0
Atru.chr1.995 Acer truncatum HOM05D000029 ORTHO05D008567 4.1e-07 58.5 88 42.0
Cpa.g.sc92.1 Carica papaya HOM05D000029 ORTHO05D008567 4.1e-07 58.5 88 42.0
Cfa016875 Carpinus fangiana HOM05D000029 ORTHO05D008567 5.4e-07 58.2 86 43.0
CiPaw.09G034100 Carya illinoinensis HOM05D000029 ORTHO05D008567 5.4e-07 58.2 88 43.2
MBI01_g39229_MAGBIO Magnolia biondii HOM05D000029 ORTHO05D008567 5.4e-07 58.2 87 41.4
Sc13g0002020 Simmondsia chinensis HOM05D000029 ORTHO05D008567 5.4e-07 58.2 87 43.7
Eucgr.A02410 Eucalyptus grandis HOM05D000029 ORTHO05D008567 7.0e-07 57.8 81 42.0
Lj1g0014304 Lotus japonicus HOM05D000029 ORTHO05D008567 7.0e-07 57.8 85 41.2
Hund19173 Selenicereus undatus HOM05D000029 ORTHO05D008567 7.0e-07 57.8 88 39.8
vmacro07873 Vaccinium macrocarpon HOM05D000029 ORTHO05D008567 7.0e-07 57.8 87 42.5
EL10Ac3g06989 Beta vulgaris HOM05D000029 ORTHO05D008567 9.2e-07 57.4 89 40.4
CsaV3_4G031480 Cucumis sativus L. HOM05D000029 ORTHO05D008567 9.2e-07 57.4 88 39.8
Psat3g070680 Pisum sativum HOM05D000029 ORTHO05D008567 9.2e-07 57.4 85 37.6
PGR004G0160 Punica granatum HOM05D000029 ORTHO05D008567 9.2e-07 57.4 88 40.9
TWI74G0036 Tripterygium wilfordii HOM05D000029 ORTHO05D008567 9.2e-07 57.4 86 43.0
Ca_08488_v3 Cicer arietinum L. HOM05D000029 ORTHO05D008567 1.2e-06 57.0 85 40.0
Oeu033771.1 Olea europaea HOM05D000029 ORTHO05D008567 1.2e-06 57.0 88 37.5
TAR636G0836 Trochodendron aralioides HOM05D000029 ORTHO05D008567 1.2e-06 57.0 87 41.4
Actinidia20291 Actinidia chinensis HOM05D000029 ORTHO05D008567 1.6e-06 56.6 52 61.5
CSS0018175 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D008567 1.6e-06 56.6 85 41.2
ClCG04G000560 Citrullus lanatus HOM05D000029 ORTHO05D008567 1.6e-06 56.6 88 40.9
MELO3C009074.2 Cucumis melo HOM05D000861 ORTHO05D008567 1.6e-06 56.6 88 39.8
Duzib093G0026 Durio zibethinus HOM05D000029 ORTHO05D008567 1.6e-06 56.6 85 43.5
VMungo1383G2988 Vigna mungo HOM05D000029 ORTHO05D008567 1.6e-06 56.6 87 40.2
GSVIVG01033343001 Vitis vinifera HOM05D000029 ORTHO05D008567 1.6e-06 56.6 87 40.2
Duzib128G0624 Durio zibethinus HOM05D000029 ORTHO05D008567 2.0e-06 56.2 87 42.5
Lalb_Chr20g0110951 Lupinus albus HOM05D000029 ORTHO05D008567 2.0e-06 56.2 85 38.8
Lalb_Chr25g0287511 Lupinus albus HOM05D000029 ORTHO05D008567 2.0e-06 56.2 85 38.8
QL07p021979 Quercus lobata HOM05D000029 ORTHO05D008567 2.0e-06 56.2 87 42.5
RcHm_v2.0_Chr3g0480901 Rosa chinensis HOM05D000029 ORTHO05D008567 2.0e-06 56.2 85 42.4
Phvul.001G137300 Phaseolus vulgaris HOM05D000029 ORTHO05D008567 2.7e-06 55.8 85 40.0
Potri.016G051600 Populus trichocarpa HOM05D000029 ORTHO05D008567 2.7e-06 55.8 83 42.2
Glyma.19G143300 Glycine max HOM05D000029 ORTHO05D008567 3.5e-06 55.5 85 38.8
MD12G1065000 Malus domestica HOM05D000029 ORTHO05D008567 3.5e-06 55.5 87 40.2
MD14G1065000 Malus domestica HOM05D000029 ORTHO05D008567 3.5e-06 55.5 85 41.2
Prupe.7G069000 Prunus persica HOM05D000029 ORTHO05D008567 3.5e-06 55.5 85 41.2
Sed0008173 Sechium edule HOM05D000029 ORTHO05D008567 3.5e-06 55.5 88 38.6
CiPaw.10G029900 Carya illinoinensis HOM05D000029 ORTHO05D008567 5.9e-06 54.7 88 40.9
Gohir.A09G124700 Gossypium hirsutum HOM05D000029 ORTHO05D008567 5.9e-06 54.7 88 39.8
Gorai.006G139200 Gossypium raimondii HOM05D000029 ORTHO05D008567 5.9e-06 54.7 88 39.8
Lj2A377G34 Lonicera japonica HOM05D000029 ORTHO05D008567 5.9e-06 54.7 83 42.2


User provided reference genes

Program Settings