Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold116G32300 Striga asiatica HOM05D003057 ORTHO05D012636 1.5e-115 419.5 209 100.0
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 1.3e-82 310.1 207 78.7
SGA_v2.0_scaffold295G47505 Striga asiatica HOM05D003057 ORTHO05D012636 3.6e-72 275.4 197 74.6
SGA_v2.0_scaffold35G14135 Striga asiatica HOM05D003057 ORTHO05D012636 5.8e-70 268.1 209 68.9
SGA_v2.0_scaffold165G38202 Striga asiatica HOM05D003057 ORTHO05D012636 1.7e-66 256.5 160 81.9
SGA_v2.0_scaffold57G20118 Striga asiatica HOM05D003057 ORTHO05D012636 6.6e-66 254.6 178 76.4
SGA_v2.0_scaffold306G48017 Striga asiatica HOM05D003057 ORTHO05D012636 2.9e-61 239.2 164 76.2
SGA_v2.0_scaffold21G09540 Striga asiatica HOM05D003057 ORTHO05D012636 6.0e-59 231.5 151 79.5
SGA_v2.0_scaffold1179G53858 Striga asiatica HOM05D003057 ORTHO05D012636 1.2e-54 217.2 142 78.9
SGA_v2.0_scaffold10G05245 Striga asiatica HOM05D003057 ORTHO05D012636 5.8e-54 214.9 131 81.7
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 3.7e-53 212.2 195 61.0
SGA_v2.0_scaffold216G42382 Striga asiatica HOM05D003057 ORTHO05D012636 6.6e-50 201.4 136 77.2
SGA_v2.0_scaffold165G38204 Striga asiatica HOM05D003057 ORTHO05D012636 3.0e-42 176.0 112 78.6
SGA_v2.0_scaffold26G11423 Striga asiatica HOM05D003057 ORTHO05D012636 3.0e-42 176.0 138 68.1
SGA_v2.0_scaffold17G08076 Striga asiatica HOM05D003057 ORTHO05D012636 1.5e-41 173.7 112 77.7
SGA_v2.0_scaffold77G25207 Striga asiatica HOM05D000001 ORTHO05D000003 2.0e-38 163.3 113 73.5
SGA_v2.0_scaffold17G08167 Striga asiatica HOM05D003057 ORTHO05D012636 2.2e-37 159.8 110 75.5
SGA_v2.0_scaffold10G05322 Striga asiatica HOM05D003057 ORTHO05D012636 1.3e-32 144.1 127 62.2
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 5.3e-15 85.5 100 46.0
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 2.6e-14 83.2 137 37.2
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 5.0e-13 79.0 81 49.4
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 5.0e-13 79.0 81 49.4
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 6.5e-13 78.6 96 46.9
TPR.G5033 Trifolium pratense HOM05D003057 ORTHO05D003904 1.2e-11 74.3 100 44.0
Sp3g10110 Schrenkiella parvula HOM05D036201 ORTHO05D012636 1.6e-11 73.9 72 52.8
Psat6g044720 Pisum sativum HOM05D003057 ORTHO05D003904 6.1e-11 72.0 91 46.2
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.3e-10 70.9 90 40.0
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 1.8e-10 70.5 206 30.1
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 3.9e-10 69.3 124 37.1
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-09 67.4 93 38.7
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 1.9e-09 67.0 175 34.9
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.6e-08 63.9 98 37.8
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 2.8e-08 63.2 72 43.1
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.8e-08 63.2 91 40.7
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.8e-08 63.2 91 40.7
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.7e-08 62.8 91 40.7
SGA_v2.0_scaffold10G05324 Striga asiatica HOM05D003057 ORTHO05D012636 3.7e-08 62.8 51 70.6
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.8e-08 62.4 85 37.6
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.8e-08 62.4 85 38.8
PSO675G6041 Papaver somniferum HOM05D003057 ORTHO05D003904 4.8e-08 62.4 98 39.8
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 6.3e-08 62.0 95 37.9
COL.COLO4_06538 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-07 61.2 107 33.6
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-07 61.2 80 46.2
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 3.1e-07 59.7 83 41.0
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 3.1e-07 59.7 87 39.1
Os12g0231600 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D012636 6.9e-07 58.5 63 49.2
Os10g0117400 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 9.0e-07 58.2 83 44.6
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-06 57.8 79 40.5
Psat0s1492g0080 Pisum sativum HOM05D003057 ORTHO05D012636 1.2e-06 57.8 51 49.0
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-06 57.4 87 42.5
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.0e-06 57.0 87 41.4
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-06 57.0 83 39.8
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.6e-06 56.6 79 38.0
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 2.6e-06 56.6 82 41.5
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.6e-06 56.6 80 41.2
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 3.4e-06 56.2 83 38.6
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 3.4e-06 56.2 83 39.8
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.0e-05 54.7 86 33.7
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.0e-05 54.7 107 35.5


User provided reference genes

Program Settings