Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 2.1e-233 812.0 403 100.0
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.0e-164 582.8 376 80.1
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 6.6e-147 524.6 368 72.8
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 3.1e-144 515.8 370 70.5
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 5.2e-144 515.0 374 70.3
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 1.2e-143 513.8 288 89.2
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.2e-143 513.8 403 67.5
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 1.3e-142 510.4 383 68.7
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 1.1e-141 507.3 361 72.0
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 4.1e-141 505.4 372 71.0
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 1.2e-140 503.8 370 69.2
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 1.6e-140 503.4 370 70.0
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 2.0e-140 503.1 370 70.0
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 2.0e-140 503.1 368 69.3
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 2.7e-140 502.7 372 69.4
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 6.0e-140 501.5 370 69.7
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 7.8e-140 501.1 374 70.3
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 2.3e-139 499.6 370 69.7
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 3.0e-139 499.2 357 71.4
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 3.0e-139 499.2 370 69.7
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 5.0e-139 498.4 369 68.8
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 6.6e-139 498.0 373 69.2
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.9e-138 496.5 357 71.1
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 2.5e-138 496.1 364 70.1
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 3.3e-138 495.7 363 70.2
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.3e-138 495.7 364 70.1
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 3.6e-137 492.3 371 67.1
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 6.2e-137 491.5 364 68.4
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 8.1e-137 491.1 289 84.4
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 1.8e-136 490.0 371 68.5
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 3.1e-136 489.2 368 69.0
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 8.9e-136 487.6 364 69.2
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 8.9e-136 487.6 371 67.1
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.2e-135 487.3 375 67.5
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-135 486.9 373 67.0
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 2.0e-135 486.5 381 65.9
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 4.4e-135 485.3 382 66.0
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 5.8e-135 485.0 362 66.6
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 7.5e-135 484.6 357 69.5
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 1.7e-134 483.4 291 82.5
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.7e-134 483.4 405 63.5
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 2.9e-134 482.6 355 68.7
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.9e-134 482.6 408 64.7
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 2.9e-134 482.6 289 82.7
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 3.7e-134 482.3 393 63.6
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 4.9e-134 481.9 362 67.1
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 6.4e-134 481.5 363 67.8
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 8.3e-134 481.1 362 67.1
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.4e-133 480.3 348 71.6
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 1.9e-133 479.9 369 65.3
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 1.9e-133 479.9 369 67.2
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 2.4e-133 479.6 354 69.8
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 4.1e-133 478.8 364 66.8
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 4.1e-133 478.8 406 63.1
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 9.2e-133 477.6 372 66.9
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 2.7e-132 476.1 363 68.0
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 2.7e-132 476.1 363 68.0
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 3.5e-132 475.7 363 66.9
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.0e-131 474.2 372 66.4
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.0e-131 474.2 396 63.1
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.0e-131 474.2 367 66.5
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 1.3e-131 473.8 355 67.6
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 2.3e-131 473.0 369 66.1
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 3.9e-131 472.2 356 67.7
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 3.9e-131 472.2 362 66.6
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 5.1e-131 471.9 368 66.3
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 8.6e-131 471.1 357 68.1
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 1.1e-130 470.7 360 66.7
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 1.1e-130 470.7 378 65.3
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 1.5e-130 470.3 363 66.9
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.5e-130 470.3 375 65.6
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 3.3e-130 469.2 365 66.6
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 3.3e-130 469.2 283 82.3
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 5.6e-130 468.4 363 66.4
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 3.6e-129 465.7 374 65.0
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 4.7e-129 465.3 359 66.6
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 4.7e-129 465.3 359 66.6
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 8.1e-129 464.5 363 65.8
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 1.1e-128 464.2 348 68.4
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 4.0e-128 462.2 369 65.6
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 6.8e-128 461.5 289 79.9
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 3.4e-127 459.1 358 65.9
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 7.6e-127 458.0 356 66.6
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 1.3e-126 457.2 365 63.8
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 2.2e-126 456.4 356 66.0
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.1e-125 454.1 375 64.8
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 3.2e-125 452.6 286 78.0
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 2.3e-123 446.4 287 79.4
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 2.5e-122 443.0 358 64.5
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 9.6e-122 441.0 288 76.7
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 4.0e-120 435.6 309 71.2
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 8.9e-120 434.5 366 62.8
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 2.6e-119 433.0 346 62.7
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.9e-117 426.8 370 61.4
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.9e-117 426.8 360 62.8
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 7.8e-116 421.4 263 79.5
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 1.9e-114 416.8 282 75.5
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 3.6e-113 412.5 293 71.3
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.4e-112 410.6 301 69.1
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.1e-104 384.4 344 59.3
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 2.4e-104 383.3 283 70.3
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 2.0e-103 380.2 234 81.6
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 2.6e-103 379.8 337 59.3
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 5.8e-103 378.6 337 59.1
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 8.7e-99 364.8 349 52.4
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.1e-98 364.4 286 66.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 4.0e-96 355.9 363 51.0
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 4.2e-93 345.9 324 54.6
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 2.3e-91 340.1 366 48.9
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 2.2e-89 333.6 271 63.1
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 7.6e-87 325.1 359 49.3
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 1.9e-85 320.5 238 66.8
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 8.7e-83 311.6 270 60.0
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 3.8e-78 296.2 348 44.8
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 7.4e-74 282.0 225 66.2
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 4.1e-72 276.2 208 67.3
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 2.2e-62 243.8 396 36.9
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 7.0e-56 222.2 181 65.7
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 1.5e-53 214.5 150 74.7
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 2.4e-48 197.2 143 70.6
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 2.6e-42 177.2 116 70.7
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 3.4e-42 176.8 129 69.0
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 5.4e-40 169.5 257 38.9
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 3.0e-35 153.7 96 81.2
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 6.2e-28 129.4 231 35.9
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 1.3e-17 95.1 82 57.3
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 9.2e-16 89.0 65 64.6
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.6e-12 78.2 50 78.0


User provided reference genes

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