Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold116G32253 Striga asiatica HOM05D001944 ORTHO05D002405 0.0e+00 1964.9 1264 100.0
SGA_v2.0_scaffold127G34027 Striga asiatica HOM05D001944 ORTHO05D002405 7.1e-123 446.4 920 49.9
MSTRG.17786 Avicennia marina HOM05D001944 ORTHO05D002405 1.1e-59 236.5 1004 28.2
Migut.N02586 Erythranthe guttata HOM05D001944 ORTHO05D002405 6.8e-57 227.3 933 30.4
MSTRG.12332 Avicennia marina HOM05D001944 ORTHO05D002405 4.9e-55 221.1 1305 25.5
Actinidia07154 Actinidia chinensis HOM05D001944 ORTHO05D002405 3.8e-39 168.3 1007 24.7
Oeu056301.1 Olea europaea HOM05D001944 ORTHO05D002405 2.4e-33 149.1 474 31.2
Dinv01067 Davidia involucrata HOM05D001944 ORTHO05D002405 1.5e-32 146.4 1017 24.4
Rhsim13G0096400 Rhododendron simsii HOM05D001944 ORTHO05D002405 8.4e-31 140.6 891 23.5
CSS0012038 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 2.4e-30 139.0 1003 22.8
Oeu013469.1 Olea europaea HOM05D001944 ORTHO05D002405 3.0e-28 132.1 1049 25.2
Actinidia20443 Actinidia chinensis HOM05D001944 ORTHO05D014293 8.1e-26 124.0 407 28.0
Potri.005G010133 Populus trichocarpa HOM05D001944 ORTHO05D002405 3.1e-25 122.1 1411 21.6
vmacro03215 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 2.6e-24 119.0 950 22.4
Dinv32718 Davidia involucrata HOM05D001944 ORTHO05D002405 5.8e-24 117.9 439 29.2
MSTRG.18675 Avicennia marina HOM05D001944 ORTHO05D002405 1.1e-22 113.6 1259 25.9
Peaxi162Scf00167g00092 Petunia axillaris HOM05D001944 ORTHO05D002405 5.4e-22 111.3 794 22.0
PSO063G0478 Papaver somniferum HOM05D001944 ORTHO05D002405 7.9e-21 107.5 292 30.8
Lj1A201T35 Lonicera japonica HOM05D001944 ORTHO05D011318 1.0e-20 107.1 192 35.9
Cc01_g10870 Coffea canephora HOM05D001944 ORTHO05D002405 1.3e-20 106.7 279 29.4
Lj2C1021G5 Lonicera japonica HOM05D001944 ORTHO05D002405 3.0e-20 105.5 1082 29.9
TAR636G3431 Trochodendron aralioides HOM05D001944 ORTHO05D002405 3.0e-20 105.5 483 27.3
CAN.G171.6 Capsicum annuum HOM05D001944 ORTHO05D002405 5.1e-20 104.8 282 28.0
AUR62022774 Chenopodium quinoa HOM05D001944 ORTHO05D002405 8.7e-20 104.0 875 26.1
PSO339G1466 Papaver somniferum HOM05D001944 ORTHO05D002405 8.7e-20 104.0 423 26.2
Rhsim01G0215200 Rhododendron simsii HOM05D001944 ORTHO05D014293 8.7e-20 104.0 661 25.0
Nn2g13727 Nelumbo nucifera HOM05D001944 ORTHO05D002405 2.5e-19 102.4 337 27.6
Atru.chr8.1406 Acer truncatum HOM05D001944 ORTHO05D002405 3.3e-19 102.1 376 28.7
Ciclev10027663m.g Citrus clementina HOM05D001944 ORTHO05D002405 4.3e-19 101.7 432 26.2
FAN16G2569 Fragaria x ananassa HOM05D001944 ORTHO05D002405 4.3e-19 101.7 243 31.3
FvH4_3g31740 Fragaria vesca HOM05D001944 ORTHO05D002405 9.6e-19 100.5 243 31.3
FAN21G2742 Fragaria x ananassa HOM05D001944 ORTHO05D002405 9.6e-19 100.5 243 30.9
AUR62029226 Chenopodium quinoa HOM05D001944 ORTHO05D002405 2.8e-18 99.0 901 25.5
FAN25G3826 Fragaria x ananassa HOM05D001944 ORTHO05D002405 6.2e-18 97.8 243 30.9
HanXRQChr01g0019301 Helianthus annuus HOM05D001944 ORTHO05D002405 8.1e-18 97.4 337 30.6
MD11G1139900 Malus domestica HOM05D001944 ORTHO05D002405 1.4e-17 96.7 289 30.4
Nitab4.5_0006532g0030 Nicotiana tabacum HOM05D001944 ORTHO05D002405 1.4e-17 96.7 1012 21.4
GSVIVG01025215001 Vitis vinifera HOM05D001944 ORTHO05D002405 2.4e-17 95.9 209 35.9
Sopen06g005090 Solanum pennellii HOM05D001944 ORTHO05D002405 5.3e-17 94.7 398 23.9
PGR102G2473 Punica granatum HOM05D001944 ORTHO05D002405 6.9e-17 94.4 310 27.1
Solyc06g010240.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 6.9e-17 94.4 410 24.9
CANSAT54G1673 Cannabis sativa HOM05D001944 ORTHO05D002405 9.0e-17 94.0 333 29.1
Nitab4.5_0000602g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 9.0e-17 94.0 1014 21.6
ECA248G3660 Erigeron canadensis HOM05D001944 ORTHO05D002405 1.2e-16 93.6 477 25.8
Hma1.2p1_0058F.1_g032350 Hydrangea macrophylla HOM05D001944 ORTHO05D011318 2.6e-16 92.4 109 43.1
ClCG03G002980 Citrullus lanatus HOM05D001944 ORTHO05D002405 3.4e-16 92.0 230 29.6
Lsat_1_v5_gn_2_98901 Lactuca sativa HOM05D001944 ORTHO05D002405 3.4e-16 92.0 139 42.4
Nitab4.5_0000181g0180 Nicotiana tabacum HOM05D001944 ORTHO05D002405 3.4e-16 92.0 376 25.3
Hma1.2p1_0307F.1_g119910 Hydrangea macrophylla HOM05D001944 ORTHO05D002405 4.5e-16 91.7 216 35.2
SGA_v2.0_scaffold180G39633 Striga asiatica HOM05D001944 ORTHO05D002405 5.8e-16 91.3 268 32.1
Aa31LG9G1980 Aethionema arabicum HOM05D001944 ORTHO05D002405 7.6e-16 90.9 214 30.8
CsaV3_1G013920 Cucumis sativus L. HOM05D001944 ORTHO05D002405 9.9e-16 90.5 315 27.6
CiPaw.14G085200 Carya illinoinensis HOM05D001944 ORTHO05D002405 2.2e-15 89.4 271 26.2
Phvul.005G133500 Phaseolus vulgaris HOM05D001944 ORTHO05D002405 4.9e-15 88.2 396 28.0
Nn2g11517 Nelumbo nucifera HOM05D001944 ORTHO05D002405 8.4e-15 87.4 336 25.3
Gohir.A05G105000 Gossypium hirsutum HOM05D001944 ORTHO05D002405 1.1e-14 87.0 277 31.0
MD11G1140000 Malus domestica HOM05D001944 ORTHO05D002405 1.1e-14 87.0 372 26.9
Sc21g0003900 Simmondsia chinensis HOM05D001944 ORTHO05D002405 1.4e-14 86.7 992 20.9
TAR633G2605 Trochodendron aralioides HOM05D001944 ORTHO05D002405 1.4e-14 86.7 291 28.9
Haze_23780 Corylus avellana HOM05D001944 ORTHO05D002405 1.9e-14 86.3 423 25.8
FAN11G3960 Fragaria x ananassa HOM05D001944 ORTHO05D002405 1.9e-14 86.3 219 29.7
TWI79G1706 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 1.9e-14 86.3 225 32.4
Dinv32719 Davidia involucrata HOM05D001944 ORTHO05D002405 5.5e-14 84.7 209 34.0
HanXRQChr14g0452741 Helianthus annuus HOM05D001944 ORTHO05D002405 5.5e-14 84.7 92 46.7
Oeu056302.1 Olea europaea HOM05D001944 ORTHO05D002405 9.3e-14 84.0 148 37.2
arahy.Tifrunner.gnm1.ann1.H0XM2A Arachis hypogaea HOM05D001944 ORTHO05D011318 1.2e-13 83.6 352 26.4
Gohir.A08G199401 Gossypium hirsutum HOM05D001944 ORTHO05D002405 2.1e-13 82.8 350 28.0
HanXRQChr01g0019281 Helianthus annuus HOM05D001944 ORTHO05D002405 2.1e-13 82.8 88 51.1
Psat5g279720 Pisum sativum HOM05D001944 ORTHO05D002405 2.7e-13 82.4 232 30.2
MELO3C004905.2 Cucumis melo HOM05D001944 ORTHO05D002405 3.5e-13 82.0 522 24.5
Hund01491 Selenicereus undatus HOM05D001944 ORTHO05D002405 3.5e-13 82.0 873 21.4
Gohir.D05G104800 Gossypium hirsutum HOM05D001944 ORTHO05D002405 4.6e-13 81.6 281 29.2
Aqoxy1G01204 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 6.0e-13 81.3 493 22.5
RcHm_v2.0_Chr5g0058411 Rosa chinensis HOM05D001944 ORTHO05D002405 6.0e-13 81.3 216 28.7
TAR623G0602 Trochodendron aralioides HOM05D001944 ORTHO05D002405 6.0e-13 81.3 199 33.2
arahy.Tifrunner.gnm1.ann1.ST0ZZW Arachis hypogaea HOM05D001944 ORTHO05D011318 2.3e-12 79.3 374 26.2
MD03G1121600 Malus domestica HOM05D001944 ORTHO05D002405 3.0e-12 79.0 442 24.7
Gorai.009G108800 Gossypium raimondii HOM05D001944 ORTHO05D002405 3.9e-12 78.6 358 27.1
HanXRQChr01g0019291 Helianthus annuus HOM05D001944 ORTHO05D002405 3.9e-12 78.6 346 25.7
CAN.G631.45 Capsicum annuum HOM05D000550 ORTHO05D009781 5.1e-12 78.2 791 20.4
FvH4_4g08540 Fragaria vesca HOM05D001944 ORTHO05D020674 5.1e-12 78.2 317 25.2
Manes.03G122401 Manihot esculenta HOM05D001944 ORTHO05D002405 5.1e-12 78.2 1064 19.9
Nitab4.5_0006619g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 5.1e-12 78.2 269 29.0
Glyma.12G175400 Glycine max HOM05D001944 ORTHO05D002405 6.7e-12 77.8 404 25.2
Thecc.09G343900 Theobroma cacao HOM05D001944 ORTHO05D002405 6.7e-12 77.8 203 32.0
Thhalv10006530m.g Eutrema salsugineum HOM05D001944 ORTHO05D002405 8.7e-12 77.4 272 26.5
Lalb_Chr01g0004401 Lupinus albus HOM05D001944 ORTHO05D011318 8.7e-12 77.4 579 23.7
QL93p2013_0009 Quercus lobata HOM05D001944 ORTHO05D002405 8.7e-12 77.4 331 27.2
THA.LOC104826377 Tarenaya hassleriana HOM05D001944 ORTHO05D002405 8.7e-12 77.4 287 26.8
GSVIVG01025216001 Vitis vinifera HOM05D001944 ORTHO05D002405 8.7e-12 77.4 127 40.2
FAN12G2222 Fragaria x ananassa HOM05D001944 ORTHO05D020674 1.1e-11 77.0 257 26.8
Oeu002984.1 Olea europaea HOM05D001944 ORTHO05D002405 1.1e-11 77.0 692 25.1
Actinidia03719 Actinidia chinensis HOM05D001944 ORTHO05D002405 1.9e-11 76.3 1040 21.4
Eucgr.B02518 Eucalyptus grandis HOM05D001944 ORTHO05D002405 1.9e-11 76.3 481 24.1
Actinidia20444 Actinidia chinensis HOM05D001944 ORTHO05D002405 3.3e-11 75.5 206 33.5
COL.COLO4_18305 Corchorus olitorius HOM05D001944 ORTHO05D002405 5.6e-11 74.7 219 29.7
ECA238G1293 Erigeron canadensis HOM05D001944 ORTHO05D002405 5.6e-11 74.7 195 31.3
FAN07G1966 Fragaria x ananassa HOM05D001944 ORTHO05D020674 5.6e-11 74.7 241 27.4
Lsat_1_v5_gn_1_63980 Lactuca sativa HOM05D001944 ORTHO05D002405 5.6e-11 74.7 294 27.6
Medtr7g101465 Medicago truncatula HOM05D001944 ORTHO05D002405 5.6e-11 74.7 141 40.4
AL1G18410 Arabidopsis lyrata HOM05D001944 ORTHO05D002405 7.4e-11 74.3 297 26.3
Ah.01g003060 Amaranthus hybridus HOM05D001944 ORTHO05D002405 9.6e-11 73.9 372 25.0
QL01p026770 Quercus lobata HOM05D001944 ORTHO05D002405 9.6e-11 73.9 296 27.4
AT1G08060 Arabidopsis thaliana HOM05D001944 ORTHO05D002405 2.1e-10 72.8 261 25.7
Duzib168G0647 Durio zibethinus HOM05D001944 ORTHO05D002405 2.1e-10 72.8 450 25.3
Carub.0001s0741 Capsella rubella HOM05D001944 ORTHO05D002405 2.8e-10 72.4 273 26.7
TPR.G9371 Trifolium pratense HOM05D001944 ORTHO05D002405 2.8e-10 72.4 137 35.8
Actinidia24118 Actinidia chinensis HOM05D001944 ORTHO05D002405 3.7e-10 72.0 343 28.0
Ca_01379_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 3.7e-10 72.0 442 25.6
Glyma.03G181800 Glycine max HOM05D001944 ORTHO05D002405 1.1e-09 70.5 109 39.4
Gorai.004G230500 Gossypium raimondii HOM05D001944 ORTHO05D002405 1.4e-09 70.1 259 29.0
Potri.004G212700 Populus trichocarpa HOM05D001944 ORTHO05D002405 1.4e-09 70.1 949 21.2
Prupe.6G104700 Prunus persica HOM05D001944 ORTHO05D002405 2.4e-09 69.3 382 23.8
THA.LOC104800593 Tarenaya hassleriana HOM05D001944 ORTHO05D002405 2.4e-09 69.3 277 27.4
Migut.D02244 Erythranthe guttata HOM05D001944 ORTHO05D002405 3.1e-09 68.9 270 30.4
AUR62029227 Chenopodium quinoa HOM05D001944 ORTHO05D002405 4.0e-09 68.6 377 23.9
Glyma.13G324500 Glycine max HOM05D001944 ORTHO05D002405 4.0e-09 68.6 416 25.7
VMungo1080G1631 Vigna mungo HOM05D001944 ORTHO05D002405 4.0e-09 68.6 448 25.0
Cfa011296 Carpinus fangiana HOM05D001944 ORTHO05D002405 5.3e-09 68.2 982 20.5
Lj3g0013525 Lotus japonicus HOM05D001944 ORTHO05D002405 5.3e-09 68.2 330 23.6
Lalb_Chr19g0137131 Lupinus albus HOM05D001944 ORTHO05D011318 6.9e-09 67.8 530 23.2
Medtr4g058650 Medicago truncatula HOM05D001944 ORTHO05D011318 6.9e-09 67.8 417 23.5
EL10Ac9g22555 Beta vulgaris HOM05D001944 ORTHO05D002405 1.2e-08 67.0 938 21.0
Duzib128G0909 Durio zibethinus HOM05D001944 ORTHO05D002405 1.2e-08 67.0 110 37.3
Psat3g043480 Pisum sativum HOM05D001944 ORTHO05D002405 1.2e-08 67.0 100 40.0
Lsat_1_v5_gn_0_24581 Lactuca sativa HOM05D001944 ORTHO05D002405 1.5e-08 66.6 78 46.2
Lj1g0027821 Lotus japonicus HOM05D001944 ORTHO05D002405 1.5e-08 66.6 89 40.4
Sed0024562 Sechium edule HOM05D001944 ORTHO05D002405 1.5e-08 66.6 245 26.9
Solyc11g069610.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 2.0e-08 66.2 982 20.4
Sp1g06700 Schrenkiella parvula HOM05D001944 ORTHO05D002405 2.6e-08 65.9 411 24.3
arahy.Tifrunner.gnm1.ann1.D4VV12 Arachis hypogaea HOM05D001944 ORTHO05D002405 4.5e-08 65.1 286 31.1
SalBow3G3117 Salvia bowleyana HOM05D001944 ORTHO05D002405 4.5e-08 65.1 270 27.4
Sopen11g028320 Solanum pennellii HOM05D001944 ORTHO05D002405 4.5e-08 65.1 982 20.6
ATR0048G049 Amborella trichopoda HOM05D001944 ORTHO05D002405 5.8e-08 64.7 190 32.6
CSS0014452 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D014293 7.6e-08 64.3 343 29.2
BcaC07g42507 Brassica carinata HOM05D001944 ORTHO05D002405 1.3e-07 63.5 306 27.1
CSS0040255 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D014293 1.3e-07 63.5 302 31.1
Gohir.D08G216700 Gossypium hirsutum HOM05D001944 ORTHO05D002405 1.3e-07 63.5 393 24.4
Lj3g0022042 Lotus japonicus HOM05D001944 ORTHO05D011318 1.3e-07 63.5 406 24.4
Sabra05G0007500 Salix brachista HOM05D001944 ORTHO05D002405 1.3e-07 63.5 1423 21.0
HPP92_003460 Vanilla planifolia HOM05D001944 ORTHO05D002405 1.3e-07 63.5 99 37.4
arahy.Tifrunner.gnm1.ann1.02PMC1 Arachis hypogaea HOM05D001944 ORTHO05D002405 2.2e-07 62.8 280 30.7
Glyma.11G196900 Glycine max HOM05D001944 ORTHO05D011318 2.2e-07 62.8 334 25.1
VMungo1383G2762 Vigna mungo HOM05D001944 ORTHO05D002405 2.2e-07 62.8 234 26.9
CSS0007832 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 2.9e-07 62.4 127 35.4
Nitab4.5_0006619g0010 Nicotiana tabacum HOM05D001944 ORTHO05D002405 2.9e-07 62.4 406 23.6
Thecc.05G062600 Theobroma cacao HOM05D001944 ORTHO05D002405 2.9e-07 62.4 120 34.2
Lalb_Chr25g0289071 Lupinus albus HOM05D001944 ORTHO05D002405 3.8e-07 62.0 132 29.5
Prupe.6G104600 Prunus persica HOM05D001944 ORTHO05D002405 3.8e-07 62.0 489 23.3
vmacro14422 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 3.8e-07 62.0 199 31.2
HPP92_003457 Vanilla planifolia HOM05D001944 ORTHO05D011318 3.8e-07 62.0 88 39.8
Potri.013G006000 Populus trichocarpa HOM05D001944 ORTHO05D002405 6.5e-07 61.2 920 19.9
Aqoxy7G00183 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 1.1e-06 60.5 335 23.3
Ca_01395_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 1.1e-06 60.5 933 23.3
Medtr2g094980 Medicago truncatula HOM05D001944 ORTHO05D011318 1.1e-06 60.5 129 31.0
SHI21823 Sapria himalayana HOM05D001944 ORTHO05D002405 1.1e-06 60.5 304 24.0
TPR.G6160 Trifolium pratense HOM05D001944 ORTHO05D011318 1.1e-06 60.5 625 22.2
Zm00001eb124990 Zea mays HOM05D013792 ORTHO05D011318 1.1e-06 60.5 113 32.7
C05p06080 Brassica napus HOM05D001944 ORTHO05D002405 1.4e-06 60.1 409 24.2
Glyma.12G077400 Glycine max HOM05D001944 ORTHO05D011318 1.4e-06 60.1 426 23.0
Os06g0102800 Oryza sativa ssp. japonica HOM05D001944 ORTHO05D002405 1.4e-06 60.1 102 35.3
Dinv37298 Davidia involucrata HOM05D001944 ORTHO05D002405 1.9e-06 59.7 124 32.3
RcHm_v2.0_Chr4g0405411 Rosa chinensis HOM05D001944 ORTHO05D020674 1.9e-06 59.7 259 23.9
QL07p044103 Quercus lobata HOM05D001944 ORTHO05D002405 2.5e-06 59.3 194 28.4
arahy.Tifrunner.gnm1.ann1.BHY38Y Arachis hypogaea HOM05D001944 ORTHO05D002405 3.2e-06 58.9 96 35.4
Phvul.011G081700 Phaseolus vulgaris HOM05D001944 ORTHO05D011318 3.2e-06 58.9 365 23.6
ECA248G2414 Erigeron canadensis HOM05D001944 ORTHO05D002405 4.2e-06 58.5 356 23.0
TPR.G11481 Trifolium pratense HOM05D001944 ORTHO05D002405 4.2e-06 58.5 290 23.1
BcaC05g24721 Brassica carinata HOM05D001944 ORTHO05D002405 5.5e-06 58.2 394 25.1
TAR369G0775 Trochodendron aralioides HOM05D001944 ORTHO05D002405 5.5e-06 58.2 1084 21.6
CDE02G3605 Ceratophyllum demersum HOM05D001944 ORTHO05D002405 7.1e-06 57.8 251 25.1
Zm00001eb036690 Zea mays HOM05D013792 ORTHO05D011318 9.3e-06 57.4 82 36.6
Zm00001eb241250 Zea mays HOM05D013792 ORTHO05D011318 9.3e-06 57.4 82 36.6
Zm00001eb379660 Zea mays HOM05D001944 ORTHO05D002405 9.3e-06 57.4 179 26.3
Zm00001eb399740 Zea mays HOM05D013792 ORTHO05D011318 9.3e-06 57.4 82 36.6


User provided reference genes

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