Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold116G32226 Striga asiatica HOM05D005987 ORTHO05D007233 2.9e-210 734.9 370 100.0
SGA_v2.0_scaffold90G27882 Striga asiatica HOM05D005987 ORTHO05D007233 9.9e-57 224.9 318 46.5
SGA_v2.0_scaffold116G32224 Striga asiatica HOM05D005987 ORTHO05D007233 3.8e-56 223.0 318 46.2
SalBow5G4110 Salvia bowleyana HOM05D005987 ORTHO05D007233 7.1e-39 165.6 317 36.3
Thecc.03G019200 Theobroma cacao HOM05D005987 ORTHO05D007233 1.3e-35 154.8 277 36.1
Nitab4.5_0003229g0030 Nicotiana tabacum HOM05D005987 ORTHO05D007233 2.8e-35 153.7 178 48.9
MSTRG.9684 Avicennia marina HOM05D005987 ORTHO05D007233 1.8e-34 151.0 178 48.3
Solyc03g112640.3 Solanum lycopersicum HOM05D005987 ORTHO05D007233 1.8e-34 151.0 178 47.8
PGSC0003DMG400018166 Solanum tuberosum HOM05D005987 ORTHO05D007233 3.1e-34 150.2 178 47.8
Sopen03g031720 Solanum pennellii HOM05D005987 ORTHO05D007233 4.0e-34 149.8 178 47.2
MSTRG.4360 Avicennia marina HOM05D005987 ORTHO05D007233 2.0e-33 147.5 315 34.0
Manes.14G063300 Manihot esculenta HOM05D005987 ORTHO05D007233 2.6e-33 147.1 291 35.4
Migut.D01982 Erythranthe guttata HOM05D005987 ORTHO05D007233 7.6e-33 145.6 176 47.7
Oeu016421.1 Olea europaea HOM05D005987 ORTHO05D007233 1.7e-32 144.4 318 33.3
CAN.G1166.26 Capsicum annuum HOM05D005987 ORTHO05D007233 2.2e-32 144.1 178 46.1
Sc12g0005210 Simmondsia chinensis HOM05D005987 ORTHO05D007233 2.9e-32 143.7 180 42.8
Oeu024705.1 Olea europaea HOM05D005987 ORTHO05D007233 3.8e-32 143.3 318 33.0
Peaxi162Scf00089g01737 Petunia axillaris HOM05D005987 ORTHO05D007233 3.8e-32 143.3 178 47.8
Actinidia19114 Actinidia chinensis HOM05D005987 ORTHO05D007233 4.9e-32 142.9 339 31.9
vmacro16628 Vaccinium macrocarpon HOM05D005987 ORTHO05D007233 4.9e-32 142.9 178 46.6
Rhsim12G0166400 Rhododendron simsii HOM05D005987 ORTHO05D007233 6.5e-32 142.5 178 46.6
CiPaw.12G028700 Carya illinoinensis HOM05D005987 ORTHO05D007233 8.4e-32 142.1 176 46.0
Hund09453 Selenicereus undatus HOM05D005987 ORTHO05D007233 8.4e-32 142.1 308 32.5
Medtr4g105460 Medicago truncatula HOM05D005987 ORTHO05D007233 1.1e-31 141.7 180 43.3
RcHm_v2.0_Chr7g0193121 Rosa chinensis HOM05D005987 ORTHO05D007233 3.2e-31 140.2 312 32.1
FvH4_5g05710 Fragaria vesca HOM05D005987 ORTHO05D007233 5.5e-31 139.4 312 31.7
QL10p008901 Quercus lobata HOM05D005987 ORTHO05D007233 5.5e-31 139.4 255 37.6
CSS0034112 Camellia sinensis var. sinensis HOM05D005987 ORTHO05D007233 7.1e-31 139.0 178 44.4
GSVIVG01007695001 Vitis vinifera HOM05D005987 ORTHO05D007233 2.7e-30 137.1 178 44.9
FAN08G2261 Fragaria x ananassa HOM05D005987 ORTHO05D007233 3.5e-30 136.7 312 31.4
unitig_0.g1431 Utricularia gibba HOM05D005987 ORTHO05D007233 3.5e-30 136.7 175 42.9
Nn4g22674 Nelumbo nucifera HOM05D005987 ORTHO05D007233 4.6e-30 136.3 187 43.3
TPR.G37495 Trifolium pratense HOM05D005987 ORTHO05D007233 4.6e-30 136.3 321 30.8
Ca_21942_v3 Cicer arietinum L. HOM05D005987 ORTHO05D007233 6.0e-30 136.0 178 42.1
Psat4g058800 Pisum sativum HOM05D005987 ORTHO05D007233 6.0e-30 136.0 176 43.8
TWI14G0473 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 6.0e-30 136.0 178 43.3
TAR629G2107 Trochodendron aralioides HOM05D005987 ORTHO05D007233 7.9e-30 135.6 178 43.8
Dinv20627 Davidia involucrata HOM05D005987 ORTHO05D007233 1.0e-29 135.2 176 45.5
Cfa019170 Carpinus fangiana HOM05D005987 ORTHO05D007233 1.3e-29 134.8 178 44.4
FAN13G1898 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.8e-29 134.4 312 30.8
Lj5A126G85 Lonicera japonica HOM05D005987 ORTHO05D007233 1.8e-29 134.4 176 43.2
TPR.G37573 Trifolium pratense HOM05D005987 ORTHO05D007233 2.3e-29 134.0 178 41.0
Ciclev10021762m.g Citrus clementina HOM05D005987 ORTHO05D007233 3.0e-29 133.7 178 42.7
Lj4g0021830 Lotus japonicus HOM05D005987 ORTHO05D007233 3.0e-29 133.7 178 40.4
Sed0001492 Sechium edule HOM05D005987 ORTHO05D007233 3.0e-29 133.7 178 42.1
VMungo1215G1113 Vigna mungo HOM05D005987 ORTHO05D007233 3.0e-29 133.7 321 29.0
ClCG06G017140 Citrullus lanatus HOM05D005987 ORTHO05D007233 3.9e-29 133.3 178 42.1
Gohir.D09G168300 Gossypium hirsutum HOM05D005987 ORTHO05D007233 3.9e-29 133.3 178 42.1
Psat4g058760 Pisum sativum HOM05D005987 ORTHO05D007233 3.9e-29 133.3 323 30.3
Cc04_g12360 Coffea canephora HOM05D005987 ORTHO05D007233 5.1e-29 132.9 157 43.9
MELO3C026282.2 Cucumis melo HOM05D005987 ORTHO05D007233 6.7e-29 132.5 178 41.6
Lsat_1_v5_gn_7_54241 Lactuca sativa HOM05D005987 ORTHO05D007233 6.7e-29 132.5 318 31.1
Eucgr.B00245 Eucalyptus grandis HOM05D005987 ORTHO05D007233 8.7e-29 132.1 182 43.4
arahy.Tifrunner.gnm1.ann1.T968NY Arachis hypogaea HOM05D005987 ORTHO05D007233 1.1e-28 131.7 185 38.9
arahy.Tifrunner.gnm1.ann1.9L10M3 Arachis hypogaea HOM05D005987 ORTHO05D007233 1.5e-28 131.3 185 38.9
CsaV3_1G001340 Cucumis sativus L. HOM05D005987 ORTHO05D007233 1.5e-28 131.3 178 40.4
Lalb_Chr12g0201721 Lupinus albus HOM05D005987 ORTHO05D007233 1.5e-28 131.3 356 29.8
TAR371G0908 Trochodendron aralioides HOM05D005987 ORTHO05D007233 1.5e-28 131.3 178 43.8
Glyma.17G087400 Glycine max HOM05D005987 ORTHO05D007233 1.9e-28 131.0 321 29.3
PSO832G1443 Papaver somniferum HOM05D005987 ORTHO05D007233 1.9e-28 131.0 180 41.1
Sed0002182 Sechium edule HOM05D005987 ORTHO05D007233 1.9e-28 131.0 177 41.8
arahy.Tifrunner.gnm1.ann1.2X5BV9 Arachis hypogaea HOM05D005987 ORTHO05D007233 2.5e-28 130.6 178 39.3
FAN04G3269 Fragaria x ananassa HOM05D005987 ORTHO05D007233 2.5e-28 130.6 326 30.7
Phvul.003G202500 Phaseolus vulgaris HOM05D002782 ORTHO05D007233 2.5e-28 130.6 318 29.2
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 3.3e-28 130.2 318 31.1
PSO782G2758 Papaver somniferum HOM05D005987 ORTHO05D007233 4.3e-28 129.8 180 41.1
Potri.015G080100 Populus trichocarpa HOM05D005987 ORTHO05D007233 4.3e-28 129.8 177 42.9
Medtr4g105450 Medicago truncatula HOM05D005987 ORTHO05D007233 5.7e-28 129.4 180 38.3
Ah.11g051440 Amaranthus hybridus HOM05D005987 ORTHO05D007233 9.6e-28 128.6 177 42.9
FAN18G2319 Fragaria x ananassa HOM05D005987 ORTHO05D007233 1.3e-27 128.3 245 34.3
HanXRQChr03g0068941 Helianthus annuus HOM05D005987 ORTHO05D007233 1.3e-27 128.3 178 40.4
AUR62028761 Chenopodium quinoa HOM05D005987 ORTHO05D007233 1.6e-27 127.9 177 42.9
MD14G1176400 Malus domestica HOM05D005987 ORTHO05D007233 1.6e-27 127.9 178 41.6
THA.LOC104798969 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 2.8e-27 127.1 178 41.0
BcaC04g23367 Brassica carinata HOM05D005987 ORTHO05D007233 3.7e-27 126.7 158 43.0
PGR083G1581 Punica granatum HOM05D005987 ORTHO05D007233 3.7e-27 126.7 180 41.7
MD06G1170600 Malus domestica HOM05D005987 ORTHO05D007233 4.8e-27 126.3 178 41.6
Nitab4.5_0001207g0020 Nicotiana tabacum HOM05D001815 ORTHO05D007233 6.3e-27 125.9 111 57.7
BcaB04g19948 Brassica carinata HOM05D005987 ORTHO05D007233 8.2e-27 125.6 158 42.4
AT5G63060 Arabidopsis thaliana HOM05D005987 ORTHO05D007233 1.4e-26 124.8 158 42.4
EL10Ac5g10704 Beta vulgaris HOM05D005987 ORTHO05D007233 1.4e-26 124.8 177 42.4
Carub.0008s2377 Capsella rubella HOM05D005987 ORTHO05D007233 1.4e-26 124.8 158 42.4
Dinv38561 Davidia involucrata HOM05D005987 ORTHO05D007233 1.8e-26 124.4 109 58.7
TWI39G0642 Tripterygium wilfordii HOM05D005987 ORTHO05D007233 1.8e-26 124.4 178 42.1
Ah.02g110630 Amaranthus hybridus HOM05D005987 ORTHO05D007233 3.1e-26 123.6 178 42.7
Gorai.006G189900 Gossypium raimondii HOM05D005987 ORTHO05D007233 3.1e-26 123.6 112 55.4
AL8G40080 Arabidopsis lyrata HOM05D005987 ORTHO05D007233 4.1e-26 123.2 158 41.8
Glyma.05G039500 Glycine max HOM05D005987 ORTHO05D007233 4.1e-26 123.2 178 37.6
MBI16_g14601_MAGBIO Magnolia biondii HOM05D005987 ORTHO05D007233 4.1e-26 123.2 178 42.1
Thhalv10004783m.g Eutrema salsugineum HOM05D005987 ORTHO05D007233 1.2e-25 121.7 155 42.6
Sp2g26190 Schrenkiella parvula HOM05D005987 ORTHO05D007233 1.2e-25 121.7 158 41.8
CARHR276860 Cardamine hirsuta HOM05D005987 ORTHO05D007233 2.0e-25 120.9 158 41.8
Os02g0321500 Oryza sativa ssp. japonica HOM05D005987 ORTHO05D007233 2.0e-25 120.9 178 38.8
DCAR_016038 Daucus carota HOM05D005987 ORTHO05D007233 2.6e-25 120.6 109 57.8
HPP92_000317 Vanilla planifolia HOM05D005987 ORTHO05D007233 2.6e-25 120.6 178 39.3
Atru.chr9.2531 Acer truncatum HOM05D005987 ORTHO05D007233 3.4e-25 120.2 252 32.5
Aqoxy3G02835 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 4.5e-25 119.8 180 39.4
THA.LOC104821480 Tarenaya hassleriana HOM05D005987 ORTHO05D007233 5.9e-25 119.4 178 38.8
A09p08010 Brassica napus HOM05D005987 ORTHO05D007233 7.6e-25 119.0 172 39.5
Aqoxy1G03751 Aquilegia oxysepala HOM05D005987 ORTHO05D007233 1.3e-24 118.2 180 38.9
Atru.chr9.2528 Acer truncatum HOM05D005987 ORTHO05D007233 1.7e-24 117.9 111 54.1
CDE06G0769 Ceratophyllum demersum HOM05D005987 ORTHO05D007233 2.2e-24 117.5 178 39.3
AUR62008180 Chenopodium quinoa HOM05D005987 ORTHO05D007233 1.1e-23 115.2 111 55.0
SEGI_07831 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 2.7e-22 110.5 316 27.8
SEGI_41325 Sequoiadendron giganteum HOM05D005987 ORTHO05D007233 2.7e-22 110.5 316 27.8
Zm00001eb379250 Zea mays HOM05D005987 ORTHO05D007233 2.7e-22 110.5 178 36.0
C09p09060 Brassica napus HOM05D005987 ORTHO05D007233 7.9e-22 109.0 158 39.9
BolC9t53819H Brassica oleracea HOM05D005987 ORTHO05D007233 7.9e-22 109.0 158 39.9
BraA09t36453Z Brassica rapa HOM05D005987 ORTHO05D007233 7.9e-22 109.0 158 39.9
Haze_07547 Corylus avellana HOM05D005987 ORTHO05D007233 7.9e-22 109.0 251 33.9
Sabra15G0104300 Salix brachista HOM05D005987 ORTHO05D007233 1.0e-21 108.6 223 34.5
Aa31LG11G610 Aethionema arabicum HOM05D005987 ORTHO05D007233 2.3e-21 107.5 176 38.1
CBR_g39624 Chara braunii HOM05D005987 ORTHO05D007233 1.5e-20 104.8 155 34.2
SalBow5G4086 Salvia bowleyana HOM05D005987 ORTHO05D007233 7.4e-20 102.4 280 31.8
AagrBONN_evm.TU.Sc2ySwM_117.1082 Anthoceros agrestis HOM05D005987 ORTHO05D007233 2.2e-19 100.9 179 32.4
Pp3c16_21460 Physcomitrium patens HOM05D005987 ORTHO05D007233 2.2e-19 100.9 158 32.9
SMO270G0062 Selaginella moellendorffii HOM05D005987 ORTHO05D007233 5.3e-18 96.3 188 33.0
ATR1152G043 Amborella trichopoda HOM05D005987 ORTHO05D007233 2.2e-16 90.9 112 40.2
Mapoly0098s0038 Marchantia polymorpha HOM05D005987 ORTHO05D007233 2.2e-16 90.9 127 39.4
FvH4_1g22320 Fragaria vesca HOM05D005987 ORTHO05D007233 1.9e-15 87.8 283 27.6
Lj7C282T17 Lonicera japonica HOM05D005987 ORTHO05D007233 3.2e-15 87.0 65 61.5
Gohir.A09G172600 Gossypium hirsutum HOM05D005987 ORTHO05D007233 1.2e-14 85.1 281 28.1
Prupe.5G170200 Prunus persica HOM05D005987 ORTHO05D007233 7.4e-12 75.9 114 37.7
Potri.012G088350 Populus trichocarpa HOM05D005987 ORTHO05D007233 3.7e-11 73.6 76 47.4
Medtr6g037460 Medicago truncatula HOM05D005987 ORTHO05D007233 6.3e-11 72.8 101 37.6
AUR62032481 Chenopodium quinoa HOM05D005987 ORTHO05D007233 2.9e-08 63.9 78 43.6
Cre10.g448051 Chlamydomonas reinhardtii HOM05D005987 ORTHO05D007233 2.9e-08 63.9 89 34.8
Zm00001eb379230 Zea mays HOM05D005987 ORTHO05D007233 6.5e-08 62.8 117 29.9
HanXRQChr13g0389901 Helianthus annuus HOM05D005987 ORTHO05D007233 2.5e-07 60.8 113 31.0
MCO02G152 Micromonas commoda HOM05D005987 ORTHO05D007233 4.7e-06 56.6 101 32.7


User provided reference genes

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