Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold116G32214 Striga asiatica HOM05D007330 ORTHO05D009368 1.4e-136 489.6 240 100.0
Dinv34698 Davidia involucrata HOM05D007330 ORTHO05D009368 4.9e-41 172.2 102 78.4
CiPaw.13G117900 Carya illinoinensis HOM05D007330 ORTHO05D009368 1.1e-40 171.0 102 78.4
Gohir.D05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.1e-40 171.0 101 79.2
Manes.11G150100 Manihot esculenta HOM05D007330 ORTHO05D009368 1.4e-40 170.6 102 79.4
Migut.N02576 Erythranthe guttata HOM05D007330 ORTHO05D009368 1.9e-40 170.2 104 75.0
Gohir.A05G106300 Gossypium hirsutum HOM05D007330 ORTHO05D009368 1.9e-40 170.2 101 78.2
vmacro03274 Vaccinium macrocarpon HOM05D007330 ORTHO05D009368 1.9e-40 170.2 102 78.4
MSTRG.18683 Avicennia marina HOM05D007330 ORTHO05D009368 2.4e-40 169.9 104 77.9
BcaB05g23421 Brassica carinata HOM05D007330 ORTHO05D009368 7.1e-40 168.3 103 78.6
Potri.009G008400 Populus trichocarpa HOM05D007330 ORTHO05D009368 9.3e-40 167.9 102 77.5
Thecc.09G347600 Theobroma cacao HOM05D007330 ORTHO05D009368 1.2e-39 167.5 102 74.5
PGR119G1592 Punica granatum HOM05D007330 ORTHO05D009368 1.6e-39 167.2 101 77.2
Rhsim13G0098500 Rhododendron simsii HOM05D007330 ORTHO05D009368 1.6e-39 167.2 102 76.5
Ciclev10029423m.g Citrus clementina HOM05D007330 ORTHO05D009368 2.7e-39 166.4 101 76.2
THA.LOC104814822 Tarenaya hassleriana HOM05D007330 ORTHO05D009368 3.5e-39 166.0 102 75.5
COL.COLO4_34706 Corchorus olitorius HOM05D007330 ORTHO05D009368 4.6e-39 165.6 100 76.0
Cc01_g10610 Coffea canephora HOM05D007330 ORTHO05D009368 6.0e-39 165.2 102 76.5
Nn2g13766 Nelumbo nucifera HOM05D007330 ORTHO05D009368 6.0e-39 165.2 101 76.2
QL01p015978 Quercus lobata HOM05D007330 ORTHO05D009368 7.9e-39 164.9 103 76.7
TAR636G1893 Trochodendron aralioides HOM05D007330 ORTHO05D009368 7.9e-39 164.9 101 78.2
CSS0040476 Camellia sinensis var. sinensis HOM05D007330 ORTHO05D009368 1.3e-38 164.1 100 76.0
ClCG03G002650 Citrullus lanatus HOM05D007330 ORTHO05D009368 1.3e-38 164.1 101 77.2
Thhalv10002688m.g Eutrema salsugineum HOM05D007330 ORTHO05D009368 1.8e-38 163.7 103 76.7
Nitab4.5_0000567g0040 Nicotiana tabacum HOM05D007330 ORTHO05D009368 1.8e-38 163.7 101 74.3
BcaC09g49699 Brassica carinata HOM05D007330 ORTHO05D009368 2.3e-38 163.3 103 75.7
A01p26570 Brassica napus HOM05D007330 ORTHO05D009368 2.3e-38 163.3 103 75.7
C01p33810 Brassica napus HOM05D007330 ORTHO05D009368 2.3e-38 163.3 103 75.7
BolC1t03342H Brassica oleracea HOM05D007330 ORTHO05D009368 2.3e-38 163.3 103 75.7
BraA01t02587Z Brassica rapa HOM05D007330 ORTHO05D009368 2.3e-38 163.3 103 75.7
Sp5g16210 Schrenkiella parvula HOM05D007330 ORTHO05D009368 3.9e-38 162.5 105 75.2
CsaV3_1G013380 Cucumis sativus L. HOM05D007330 ORTHO05D009368 6.7e-38 161.8 101 75.2
DCAR_018785 Daucus carota HOM05D007330 ORTHO05D009368 8.7e-38 161.4 102 76.5
Glyma.12G079000 Glycine max HOM05D007330 ORTHO05D009368 8.7e-38 161.4 102 73.5
Atru.chr3.3558 Acer truncatum HOM05D007330 ORTHO05D009368 1.1e-37 161.0 100 74.0
CANSAT35G1795 Cannabis sativa HOM05D007330 ORTHO05D009368 1.5e-37 160.6 104 75.0
MELO3C004968.2 Cucumis melo HOM05D007330 ORTHO05D009368 2.5e-37 159.8 101 74.3
Glyma.11G195100 Glycine max HOM05D007330 ORTHO05D009368 2.5e-37 159.8 102 72.5
Eucgr.J00897 Eucalyptus grandis HOM05D007330 ORTHO05D009368 3.3e-37 159.5 101 75.2
HanXRQChr11g0346411 Helianthus annuus HOM05D007330 ORTHO05D009368 5.6e-37 158.7 101 76.2
Aa31LG4G14100 Aethionema arabicum HOM05D007330 ORTHO05D009368 7.4e-37 158.3 102 76.5
CARHR150920 Cardamine hirsuta HOM05D007330 ORTHO05D009368 7.4e-37 158.3 100 75.0
Lsat_1_v5_gn_1_63180 Lactuca sativa HOM05D007330 ORTHO05D009368 1.3e-36 157.5 103 72.8
Sopen04g002470 Solanum pennellii HOM05D007330 ORTHO05D009368 1.6e-36 157.1 101 71.3
Lj3g0015691 Lotus japonicus HOM05D007330 ORTHO05D009368 2.1e-36 156.8 101 72.3
Actinidia07167 Actinidia chinensis HOM05D007330 ORTHO05D009368 6.2e-36 155.2 90 77.8
ECA248G2053 Erigeron canadensis HOM05D007330 ORTHO05D009368 6.2e-36 155.2 102 72.5
Lalb_Chr19g0137021 Lupinus albus HOM05D007330 ORTHO05D009368 6.2e-36 155.2 103 72.8
FvH4_3g31190 Fragaria vesca HOM05D007330 ORTHO05D009368 8.2e-36 154.8 100 71.0
FAN11G3216 Fragaria x ananassa HOM05D007330 ORTHO05D009368 8.2e-36 154.8 100 71.0
Sed0025524 Sechium edule HOM05D007330 ORTHO05D009368 1.1e-35 154.5 101 71.3
Solyc04g007410.4 Solanum lycopersicum HOM05D007330 ORTHO05D009368 1.1e-35 154.5 101 70.3
Hma1.2p1_0569F.1_g180250 Hydrangea macrophylla HOM05D007330 ORTHO05D009368 1.4e-35 154.1 100 73.0
RcHm_v2.0_Chr5g0057841 Rosa chinensis HOM05D007330 ORTHO05D009368 1.4e-35 154.1 100 72.0
Ca_19301_v3 Cicer arietinum L. HOM05D007330 ORTHO05D009368 2.4e-35 153.3 101 72.3
FAN25G0306 Fragaria x ananassa HOM05D007330 ORTHO05D009368 5.3e-35 152.1 100 69.0
CAN.G1577.6 Capsicum annuum HOM05D007330 ORTHO05D009368 6.9e-35 151.8 100 71.0
VMungo1127G0312 Vigna mungo HOM05D007330 ORTHO05D009368 6.9e-35 151.8 102 68.6
FAN21G2017 Fragaria x ananassa HOM05D007330 ORTHO05D009368 9.0e-35 151.4 100 69.0
TWI31G1101 Tripterygium wilfordii HOM05D007330 ORTHO05D009368 1.5e-34 150.6 102 69.6
Peaxi162Scf00064g00193 Petunia axillaris HOM05D007330 ORTHO05D009368 3.4e-34 149.4 102 71.6
AT3G45050 Arabidopsis thaliana HOM05D007330 ORTHO05D009368 5.8e-34 148.7 100 74.0
GSVIVG01031517001 Vitis vinifera HOM05D000070 ORTHO05D001255 5.8e-34 148.7 101 71.3
Ah.01g003130 Amaranthus hybridus HOM05D007330 ORTHO05D009368 1.3e-33 147.5 102 65.7
Carub.0005s1083 Capsella rubella HOM05D007330 ORTHO05D009368 1.3e-33 147.5 100 73.0
Medtr4g057845 Medicago truncatula HOM05D007330 ORTHO05D009368 2.9e-33 146.4 101 68.3
PSO339G1528 Papaver somniferum HOM05D007330 ORTHO05D009368 3.8e-33 146.0 102 68.6
MD11G1142300 Malus domestica HOM05D007330 ORTHO05D009368 6.5e-33 145.2 100 71.0
Sc15g0001620 Simmondsia chinensis HOM05D007330 ORTHO05D009368 8.4e-33 144.8 137 54.0
Phvul.011G083600 Phaseolus vulgaris HOM05D007330 ORTHO05D009368 3.2e-32 142.9 95 70.5
Psat4g155560 Pisum sativum HOM05D007330 ORTHO05D009368 1.2e-31 141.0 103 67.0
MBI18_g25263_MAGBIO Magnolia biondii HOM05D007330 ORTHO05D009368 1.3e-30 137.5 130 53.1
arahy.Tifrunner.gnm1.ann1.PP0PHB Arachis hypogaea HOM05D007330 ORTHO05D009368 1.8e-30 137.1 105 64.8
arahy.Tifrunner.gnm1.ann1.V5GM9G Arachis hypogaea HOM05D007330 ORTHO05D009368 1.8e-30 137.1 105 64.8
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 6.7e-30 135.2 101 59.4
AL5G23540 Arabidopsis lyrata HOM05D007330 ORTHO05D009368 1.1e-29 134.4 76 81.6
Peaxi162Scf00597g00033 Petunia axillaris HOM05D007330 ORTHO05D009368 3.3e-29 132.9 104 64.4
PSO801G0259 Papaver somniferum HOM05D007330 ORTHO05D009368 7.4e-29 131.7 82 73.2
AUR62022766 Chenopodium quinoa HOM05D007330 ORTHO05D009368 6.3e-28 128.6 102 58.8
Lj1A195G28 Lonicera japonica HOM05D007330 ORTHO05D009368 1.4e-24 117.5 100 60.0
Gorai.009G110400 Gossypium raimondii HOM05D007330 ORTHO05D009368 1.9e-24 117.1 75 73.3
Cpa.g.sc65.31 Carica papaya HOM05D007330 ORTHO05D009368 2.5e-24 116.7 75 77.3
SEGI_17989 Sequoiadendron giganteum HOM05D007330 ORTHO05D009368 4.2e-24 115.9 134 44.0
Prupe.6G107600 Prunus persica HOM05D007330 ORTHO05D009368 7.2e-24 115.2 76 72.4
HPP92_007165 Vanilla planifolia HOM05D007330 ORTHO05D009368 1.6e-23 114.0 105 54.3
Lj1C194T4 Lonicera japonica HOM05D007330 ORTHO05D009368 2.1e-23 113.6 74 74.3
Nitab4.5_0003325g0010 Nicotiana tabacum HOM05D007330 ORTHO05D009368 2.7e-23 113.2 74 71.6
Aqoxy2G01788 Aquilegia oxysepala HOM05D007330 ORTHO05D009368 3.6e-23 112.8 76 75.0
Os06g0731300 Oryza sativa ssp. japonica HOM05D007330 ORTHO05D009368 1.3e-22 110.9 71 64.8
PGSC0003DMG400005973 Solanum tuberosum HOM05D007330 ORTHO05D009368 1.3e-22 110.9 74 71.6
Peaxi162Scf00958g00023 Petunia axillaris HOM05D007330 ORTHO05D009368 6.7e-22 108.6 79 72.2
Sabra09G0004900 Salix brachista HOM05D007330 ORTHO05D009368 1.5e-21 107.5 75 65.3
Pp3c18_13360 Physcomitrium patens HOM05D007330 ORTHO05D009368 7.4e-21 105.1 97 50.5
AagrBONN_evm.TU.Sc2ySwM_228.4164 Anthoceros agrestis HOM05D007330 ORTHO05D009368 4.8e-20 102.4 96 53.1
MD03G1125100 Malus domestica HOM05D007330 ORTHO05D009368 5.3e-19 99.0 55 80.0
CBR_g54316 Chara braunii HOM05D007330 ORTHO05D009368 1.3e-17 94.4 102 47.1
Hund08155 Selenicereus undatus HOM05D007330 ORTHO05D009368 5.5e-16 89.0 71 56.3
SGA_v2.0_scaffold161G37871 Striga asiatica HOM05D000493 ORTHO05D399025 6.1e-15 85.5 45 86.7
Mapoly0184s0021 Marchantia polymorpha HOM05D007330 ORTHO05D009368 5.1e-14 82.4 101 46.5
SMO367G0878 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 8.8e-14 81.6 100 44.0
Haze_23760 Corylus avellana HOM05D007330 ORTHO05D009368 1.1e-13 81.3 129 40.3
SMO275G0064 Selaginella moellendorffii HOM05D007330 ORTHO05D009368 2.0e-13 80.5 100 43.0
arahy.Tifrunner.gnm1.ann1.N36MJA Arachis hypogaea HOM05D007330 ORTHO05D009368 1.7e-12 77.4 70 57.1
AUR62029217 Chenopodium quinoa HOM05D007330 ORTHO05D009368 4.5e-10 69.3 92 42.4
Oeu013536.1 Olea europaea HOM05D000070 ORTHO05D001255 1.6e-07 60.8 95 41.1
EL10Ac9g22568 Beta vulgaris HOM05D007330 ORTHO05D009368 1.8e-06 57.4 27 85.2


User provided reference genes

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