Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold115G32141 Striga asiatica HOM05D004498 ORTHO05D005300 6.6e-293 1010.0 519 100.0
Migut.D02110 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.0e-196 689.5 572 67.7
Migut.G01103 Erythranthe guttata HOM05D004498 ORTHO05D005300 2.4e-194 682.6 572 66.8
SGA_v2.0_scaffold92G28289 Striga asiatica HOM05D004498 ORTHO05D005300 2.1e-182 642.9 416 84.4
Hma1.2p1_0432F.1_g151900 Hydrangea macrophylla HOM05D004498 ORTHO05D005300 1.6e-166 590.1 555 58.9
QL09p005249 Quercus lobata HOM05D004498 ORTHO05D005300 3.4e-164 582.4 554 57.8
Manes.14G037200 Manihot esculenta HOM05D004498 ORTHO05D005300 7.6e-164 581.3 556 58.1
Cfa008145 Carpinus fangiana HOM05D004498 ORTHO05D005300 3.2e-162 575.9 560 56.2
Solyc05g051630.4 Solanum lycopersicum HOM05D004498 ORTHO05D005300 5.5e-162 575.1 565 56.8
Dinv16848 Davidia involucrata HOM05D004498 ORTHO05D005300 2.7e-161 572.8 518 61.2
Atru.chr1.817 Acer truncatum HOM05D004498 ORTHO05D005300 4.6e-161 572.0 567 56.1
Ciclev10004737m.g Citrus clementina HOM05D004498 ORTHO05D005300 1.0e-160 570.9 557 56.7
Potri.001G126200 Populus trichocarpa HOM05D004498 ORTHO05D005300 1.8e-160 570.1 556 56.8
TAR375G0984 Trochodendron aralioides HOM05D004498 ORTHO05D005300 1.8e-160 570.1 583 55.1
CiPaw.03G020300 Carya illinoinensis HOM05D004498 ORTHO05D005300 6.7e-160 568.2 570 55.4
Cc02_g04430 Coffea canephora HOM05D004498 ORTHO05D005300 6.7e-160 568.2 555 57.7
CAN.G937.4 Capsicum annuum HOM05D004498 ORTHO05D005300 1.9e-159 566.6 554 56.3
Gorai.008G215300 Gossypium raimondii HOM05D004498 ORTHO05D005300 1.9e-159 566.6 570 56.1
Gohir.D12G200100 Gossypium hirsutum HOM05D004498 ORTHO05D005300 3.3e-159 565.8 573 56.4
Ca_02786_v3 Cicer arietinum L. HOM05D004498 ORTHO05D005300 7.4e-159 564.7 555 56.9
Aqoxy3G03912 Aquilegia oxysepala HOM05D004498 ORTHO05D005300 1.3e-158 563.9 572 55.4
Medtr4g036550 Medicago truncatula HOM05D004498 ORTHO05D005300 1.1e-157 560.8 555 56.4
Rhsim03G0165600 Rhododendron simsii HOM05D004498 ORTHO05D005300 2.4e-157 559.7 569 55.5
COL.COLO4_14097 Corchorus olitorius HOM05D004498 ORTHO05D005300 9.0e-157 557.8 571 54.8
DCAR_009449 Daucus carota HOM05D004498 ORTHO05D005300 9.0e-157 557.8 527 57.5
Psat6g116600 Pisum sativum HOM05D004498 ORTHO05D005300 3.4e-156 555.8 555 55.9
ECA233G4878 Erigeron canadensis HOM05D004498 ORTHO05D005300 5.9e-156 555.1 556 56.3
Sed0003630 Sechium edule HOM05D004498 ORTHO05D005300 1.0e-155 554.3 555 56.0
Lj3g0015680 Lotus japonicus HOM05D004498 ORTHO05D005300 3.8e-155 552.4 556 55.9
TPR.G3665 Trifolium pratense HOM05D004498 ORTHO05D005300 3.8e-155 552.4 555 55.5
Psat6g142360 Pisum sativum HOM05D004498 ORTHO05D005300 6.5e-155 551.6 555 55.9
Thecc.03G153100 Theobroma cacao HOM05D004498 ORTHO05D005300 1.1e-154 550.8 555 55.9
Lalb_Chr04g0258171 Lupinus albus HOM05D004498 ORTHO05D005300 4.2e-154 548.9 556 55.6
THA.LOC104819414 Tarenaya hassleriana HOM05D004498 ORTHO05D005300 1.2e-153 547.4 559 54.6
Glyma.09G230400 Glycine max HOM05D004498 ORTHO05D005300 1.8e-152 543.5 557 55.1
SalBow7G0508 Salvia bowleyana HOM05D004498 ORTHO05D005300 5.1e-152 542.0 442 69.5
Eucgr.G03077 Eucalyptus grandis HOM05D004498 ORTHO05D005300 1.5e-151 540.4 557 53.9
Phvul.011G007100 Phaseolus vulgaris HOM05D004498 ORTHO05D005300 1.5e-151 540.4 557 53.5
CsaV3_4G004040 Cucumis sativus L. HOM05D004498 ORTHO05D005300 1.9e-151 540.0 557 54.2
Sp6g35240 Schrenkiella parvula HOM05D004498 ORTHO05D005300 1.9e-151 540.0 552 54.9
Sc15g0000230 Simmondsia chinensis HOM05D004498 ORTHO05D005300 1.3e-150 537.3 559 53.1
Actinidia24991 Actinidia chinensis HOM05D004498 ORTHO05D005300 4.8e-150 535.4 544 56.2
Nitab4.5_0001187g0110 Nicotiana tabacum HOM05D004498 ORTHO05D005300 4.8e-150 535.4 535 57.2
AL6G17950 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 1.8e-149 533.5 552 54.2
Carub.0006s0661 Capsella rubella HOM05D004498 ORTHO05D005300 1.8e-149 533.5 552 54.3
Sabra01G0097300 Salix brachista HOM05D004498 ORTHO05D005300 1.8e-149 533.5 630 49.4
Thhalv10013248m.g Eutrema salsugineum HOM05D004498 ORTHO05D005300 2.4e-149 533.1 561 53.8
PSO210G0611 Papaver somniferum HOM05D004498 ORTHO05D005300 5.3e-149 531.9 572 52.8
BcaC06g32495 Brassica carinata HOM05D004498 ORTHO05D005300 1.5e-148 530.4 558 53.9
CSS0042388 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 3.4e-148 529.3 449 62.4
BcaB05g21603 Brassica carinata HOM05D004498 ORTHO05D005300 4.5e-148 528.9 555 53.5
A10p29360 Brassica napus HOM05D004498 ORTHO05D005300 4.5e-148 528.9 575 53.2
PSO210G1345 Papaver somniferum HOM05D004498 ORTHO05D005300 7.7e-148 528.1 572 52.3
BcaC03g13193 Brassica carinata HOM05D004498 ORTHO05D005300 1.0e-147 527.7 555 53.5
BraA10t44979Z Brassica rapa HOM05D004498 ORTHO05D005300 2.9e-147 526.2 575 53.0
Prupe.6G033300 Prunus persica HOM05D004498 ORTHO05D005300 2.5e-146 523.1 556 53.1
MD11G1042200 Malus domestica HOM05D004498 ORTHO05D005300 4.2e-146 522.3 572 52.6
Hund20838 Selenicereus undatus HOM05D004498 ORTHO05D005300 4.6e-145 518.8 541 53.6
AT5G07630 Arabidopsis thaliana HOM05D004498 ORTHO05D005300 3.0e-144 516.2 559 51.7
HanXRQChr05g0142551 Helianthus annuus HOM05D004498 ORTHO05D005300 2.5e-143 513.1 549 53.7
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 3.3e-143 512.7 549 52.8
BraA02t04927Z Brassica rapa HOM05D004498 ORTHO05D005300 5.7e-143 511.9 618 48.1
ClCG07G016840 Citrullus lanatus HOM05D004498 ORTHO05D005300 1.3e-142 510.8 528 54.5
BolC2t06286H Brassica oleracea HOM05D004498 ORTHO05D005300 4.8e-142 508.8 629 47.7
Gohir.A12G197600 Gossypium hirsutum HOM05D004498 ORTHO05D005300 1.4e-141 507.3 543 54.7
TWI23G0902 Tripterygium wilfordii HOM05D004498 ORTHO05D005300 4.5e-140 502.3 452 58.6
Lj8A44G33 Lonicera japonica HOM05D004498 ORTHO05D005300 1.0e-139 501.1 455 62.6
Sopen05g030080 Solanum pennellii HOM05D004498 ORTHO05D005300 3.2e-138 496.1 427 61.1
Lsat_1_v5_gn_8_10281 Lactuca sativa HOM05D004498 ORTHO05D005300 2.7e-137 493.0 446 58.3
Duzib084G1021 Durio zibethinus HOM05D004498 ORTHO05D005300 3.0e-136 489.6 526 53.0
Glyma.12G006200 Glycine max HOM05D004498 ORTHO05D005300 3.9e-136 489.2 515 54.6
Migut.G01144 Erythranthe guttata HOM05D004498 ORTHO05D005300 8.2e-134 481.5 332 77.1
Manes.06G133200 Manihot esculenta HOM05D004498 ORTHO05D005300 1.2e-132 477.6 570 50.4
Ah.15g094140 Amaranthus hybridus HOM05D004498 ORTHO05D005300 4.5e-132 475.7 590 48.0
FvH4_3g41750 Fragaria vesca HOM05D004498 ORTHO05D005300 3.8e-131 472.6 584 49.0
GSVIVG01014038001 Vitis vinifera HOM05D004498 ORTHO05D005300 1.5e-130 470.7 558 48.7
Carub.0003s0947 Capsella rubella HOM05D004498 ORTHO05D005300 3.2e-130 469.5 556 49.6
RcHm_v2.0_Chr5g0074831 Rosa chinensis HOM05D004498 ORTHO05D005300 3.2e-130 469.5 584 48.8
Nn1g09651 Nelumbo nucifera HOM05D004498 ORTHO05D005300 9.4e-130 468.0 443 59.6
Aa31LG3G18790 Aethionema arabicum HOM05D004498 ORTHO05D005300 1.8e-128 463.8 554 48.4
Peaxi162Scf00167g00733 Petunia axillaris HOM05D004498 ORTHO05D005300 1.8e-128 463.8 409 60.9
FAN11G1420 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.0e-127 460.3 599 47.6
AUR62009833 Chenopodium quinoa HOM05D004498 ORTHO05D005300 7.5e-127 458.4 425 57.2
MELO3C017661.2 Cucumis melo HOM05D004498 ORTHO05D005300 2.8e-126 456.4 444 57.4
SHI13988 Sapria himalayana HOM05D004498 ORTHO05D005300 3.7e-126 456.1 498 51.8
FAN16G2392 Fragaria x ananassa HOM05D004498 ORTHO05D005300 8.2e-126 454.9 569 48.7
PGR119G0143 Punica granatum HOM05D004498 ORTHO05D005300 4.5e-124 449.1 511 53.2
unitig_578.g16611 Utricularia gibba HOM05D004498 ORTHO05D005300 4.5e-124 449.1 459 52.9
vmacro22807 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 2.5e-122 443.4 521 51.6
C09p69720 Brassica napus HOM05D004498 ORTHO05D005300 5.5e-122 442.2 435 55.9
EL10Ac7g16351 Beta vulgaris HOM05D004498 ORTHO05D005300 2.7e-121 439.9 628 43.3
BolC9t59715H Brassica oleracea HOM05D004498 ORTHO05D005300 2.7e-121 439.9 443 55.1
AL3G21620 Arabidopsis lyrata HOM05D004498 ORTHO05D005300 3.6e-121 439.5 528 49.8
Nitab4.5_0002764g0030 Nicotiana tabacum HOM05D004498 ORTHO05D005300 6.8e-120 435.3 415 58.6
FAN25G1514 Fragaria x ananassa HOM05D004498 ORTHO05D005300 2.8e-118 429.9 607 45.1
FAN21G3639 Fragaria x ananassa HOM05D004498 ORTHO05D005300 5.4e-117 425.6 443 53.7
ATR0745G086 Amborella trichopoda HOM05D004498 ORTHO05D005300 1.6e-113 414.1 560 45.2
arahy.Tifrunner.gnm1.ann1.LBI7WJ Arachis hypogaea HOM05D004498 ORTHO05D005300 1.7e-110 404.1 379 58.6
arahy.Tifrunner.gnm1.ann1.V9VPQR Arachis hypogaea HOM05D004498 ORTHO05D005300 1.8e-109 400.6 426 52.6
Oeu022469.1 Olea europaea HOM05D004498 ORTHO05D005300 2.9e-107 393.3 347 62.2
HPP92_003455 Vanilla planifolia HOM05D004498 ORTHO05D005300 1.9e-106 390.6 556 44.2
Migut.A00970 Erythranthe guttata HOM05D004498 ORTHO05D005300 7.5e-103 378.6 302 68.2
Zm00001eb105090 Zea mays HOM05D004498 ORTHO05D005300 4.9e-102 375.9 449 48.3
Rhsim07G0010200 Rhododendron simsii HOM05D004498 ORTHO05D005300 1.5e-95 354.4 352 55.7
Dinv06575 Davidia involucrata HOM05D004498 ORTHO05D005300 1.1e-93 348.2 335 59.7
GSVIVG01037114001 Vitis vinifera HOM05D004498 ORTHO05D005300 4.4e-87 326.2 394 49.5
CARHR205520 Cardamine hirsuta HOM05D004498 ORTHO05D005300 4.0e-80 303.1 215 71.2
Mapoly0124s0016 Marchantia polymorpha HOM05D004498 ORTHO05D005300 2.6e-79 300.4 568 37.1
Pp3c18_8280 Physcomitrium patens HOM05D004498 ORTHO05D005300 1.1e-77 295.0 454 39.4
Nitab4.5_0000818g0240 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.1e-76 290.8 309 54.0
arahy.Tifrunner.gnm1.ann1.XAT8RN Arachis hypogaea HOM05D004498 ORTHO05D005300 1.1e-72 278.5 210 66.2
AagrBONN_evm.TU.Sc2ySwM_362.1167 Anthoceros agrestis HOM05D004498 ORTHO05D005300 5.8e-71 272.7 440 38.4
SMO200G0031 Selaginella moellendorffii HOM05D004498 ORTHO05D005300 1.7e-70 271.2 550 34.9
Nitab4.5_0003647g0080 Nicotiana tabacum HOM05D004498 ORTHO05D005300 5.3e-56 223.0 455 36.0
Migut.G01109 Erythranthe guttata HOM05D004498 ORTHO05D005300 9.3e-53 212.2 193 60.1
SEGI_20056 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 1.1e-48 198.7 197 54.3
Oeu042546.1 Olea europaea HOM05D004498 ORTHO05D005300 3.1e-48 197.2 153 71.2
AagrBONN_evm.TU.Sc2ySwM_362.1160 Anthoceros agrestis HOM05D004498 ORTHO05D005300 7.6e-47 192.6 427 33.7
SGA_v2.0_scaffold4035G54420 Striga asiatica HOM05D004498 ORTHO05D005300 7.1e-45 186.0 108 84.3
AUR62038145 Chenopodium quinoa HOM05D004498 ORTHO05D005300 2.1e-44 184.5 371 35.3
Actinidia13585 Actinidia chinensis HOM05D004498 ORTHO05D005300 1.6e-41 174.9 200 48.5
CDE02G4122 Ceratophyllum demersum HOM05D004498 ORTHO05D005300 3.1e-40 170.6 117 75.2
Sabra03G0074300 Salix brachista HOM05D004498 ORTHO05D005300 3.4e-39 167.2 152 62.5
BcaC06g32419 Brassica carinata HOM05D004498 ORTHO05D005300 1.9e-34 151.4 409 29.6
Cre11.g467726 Chlamydomonas reinhardtii HOM05D004498 ORTHO05D005300 9.1e-32 142.5 545 28.4
arahy.Tifrunner.gnm1.ann1.BI5KXL Arachis hypogaea HOM05D004498 ORTHO05D005300 1.7e-30 138.3 228 40.8
MCO14G174 Micromonas commoda HOM05D004498 ORTHO05D005300 3.0e-27 127.5 291 33.3
Nn1g09635 Nelumbo nucifera HOM05D004498 ORTHO05D005300 3.1e-24 117.5 99 53.5
SalBow7G0435 Salvia bowleyana HOM05D004498 ORTHO05D005300 5.9e-23 113.2 92 57.6
Os07g0486100 Oryza sativa ssp. japonica HOM05D004498 ORTHO05D005300 2.9e-22 110.9 240 37.1
PGSC0003DMG402007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 2.9e-22 110.9 99 54.5
BcaNung06188 Brassica carinata HOM05D004498 ORTHO05D005300 1.9e-21 108.2 97 50.5
FvH4_1g27600 Fragaria vesca HOM05D004498 ORTHO05D005300 4.2e-21 107.1 89 64.0
Potri.003G107501 Populus trichocarpa HOM05D004498 ORTHO05D005300 3.0e-19 100.9 67 76.1
Prupe.6G034800 Prunus persica HOM05D004498 ORTHO05D005300 2.8e-17 94.4 56 83.9
vmacro22806 Vaccinium macrocarpon HOM05D004498 ORTHO05D005300 1.2e-15 89.0 84 47.6
CSS0021614 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 3.5e-15 87.4 56 67.9
PRCOL_00001376 Prasinoderma coloniale HOM05D004498 ORTHO05D005300 7.7e-15 86.3 328 28.0
SEGI_28281 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 1.5e-13 82.0 181 32.0
PGSC0003DMG401007235 Solanum tuberosum HOM05D004498 ORTHO05D005300 1.9e-13 81.6 42 90.5
CSS0024530 Camellia sinensis var. sinensis HOM05D004498 ORTHO05D005300 1.2e-12 79.0 54 68.5
Nitab4.5_0002764g0040 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.1e-12 78.2 75 56.0
Nitab4.5_0003647g0090 Nicotiana tabacum HOM05D004498 ORTHO05D005300 2.1e-12 78.2 48 77.1
CARHR084780 Cardamine hirsuta HOM05D004498 ORTHO05D005300 6.1e-12 76.6 64 62.5
SEGI_08016 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.4e-10 70.5 101 38.6
SEGI_20600 Sequoiadendron giganteum HOM05D004498 ORTHO05D005300 4.4e-10 70.5 101 38.6
GSVIVG01037115001 Vitis vinifera HOM05D004498 ORTHO05D005300 5.0e-06 57.0 60 51.7
AagrBONN_evm.TU.Sc2ySwM_117.318 Anthoceros agrestis HOM05D004498 ORTHO05D005300 6.5e-06 56.6 111 34.2


User provided reference genes

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