Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold115G32104 Striga asiatica HOM05D004795 ORTHO05D005518 8.2e-126 453.8 233 100.0
Oeu050378.1 Olea europaea HOM05D004795 ORTHO05D005518 7.9e-44 181.4 205 57.1
MSTRG.3555 Avicennia marina HOM05D004795 ORTHO05D005518 1.1e-42 177.6 208 54.3
Oeu016627.1 Olea europaea HOM05D004795 ORTHO05D005518 3.7e-41 172.6 205 54.1
Oeu039734.1 Olea europaea HOM05D004795 ORTHO05D005518 1.1e-40 171.0 207 55.6
Nitab4.5_0000912g0060 Nicotiana tabacum HOM05D004795 ORTHO05D005518 1.1e-37 161.0 204 51.5
CAN.G625.30 Capsicum annuum HOM05D004795 ORTHO05D005518 1.9e-37 160.2 181 54.7
PGSC0003DMG402026390 Solanum tuberosum HOM05D004795 ORTHO05D005518 3.6e-36 156.0 180 53.3
Sopen02g030830 Solanum pennellii HOM05D004795 ORTHO05D005518 4.6e-36 155.6 180 53.3
Migut.L00330 Erythranthe guttata HOM05D004795 ORTHO05D005518 5.1e-35 152.1 185 54.6
Cc07_g08730 Coffea canephora HOM05D004795 ORTHO05D005518 1.5e-34 150.6 182 57.1
Dinv33956 Davidia involucrata HOM05D001490 ORTHO05D001450 4.5e-31 139.0 175 53.7
Peaxi162Scf00394g00712 Petunia axillaris HOM05D004795 ORTHO05D005518 2.9e-30 136.3 180 50.0
QL02p051034 Quercus lobata HOM05D004795 ORTHO05D005518 1.4e-29 134.0 177 51.4
QL12p016552 Quercus lobata HOM05D004795 ORTHO05D005518 1.4e-29 134.0 177 51.4
DCAR_025909 Daucus carota HOM05D004795 ORTHO05D005518 9.4e-29 131.3 168 53.6
Lsat_1_v5_gn_4_154580 Lactuca sativa HOM05D004795 ORTHO05D005518 7.9e-28 128.3 177 47.5
Rhsim10G0068600 Rhododendron simsii HOM05D004795 ORTHO05D005518 7.9e-28 128.3 177 49.7
Sabra04G0081300 Salix brachista HOM05D004795 ORTHO05D005518 3.9e-27 125.9 173 48.6
Cfa007915 Carpinus fangiana HOM05D004795 ORTHO05D005518 1.5e-26 124.0 174 51.7
CANSAT78G0274 Cannabis sativa HOM05D004795 ORTHO05D005518 9.7e-26 121.3 219 42.9
Nitab4.5_0004416g0090 Nicotiana tabacum HOM05D004795 ORTHO05D005518 2.8e-25 119.8 149 51.7
Sabra17G0096100 Salix brachista HOM05D004795 ORTHO05D005518 1.1e-24 117.9 196 43.9
CiPaw.03G062800 Carya illinoinensis HOM05D004795 ORTHO05D005518 1.4e-24 117.5 176 49.4
MD17G1245500 Malus domestica HOM05D004795 ORTHO05D005518 2.4e-24 116.7 190 45.3
Duzib138G0938 Durio zibethinus HOM05D004795 ORTHO05D005518 3.1e-24 116.3 178 46.6
Ah.16g101690 Amaranthus hybridus HOM05D004795 ORTHO05D005518 6.9e-24 115.2 172 44.2
Duzib133G0847 Durio zibethinus HOM05D004795 ORTHO05D005518 1.2e-23 114.4 175 47.4
Prupe.3G143600 Prunus persica HOM05D004795 ORTHO05D005518 1.5e-23 114.0 187 46.0
Ciclev10012794m.g Citrus clementina HOM05D004795 ORTHO05D005518 4.5e-23 112.5 189 43.4
COL.COLO4_09348 Corchorus olitorius HOM05D004795 ORTHO05D005518 4.5e-23 112.5 176 47.2
Manes.02G069600 Manihot esculenta HOM05D004795 ORTHO05D005518 7.7e-23 111.7 174 47.1
Atru.chr1.1662 Acer truncatum HOM05D004795 ORTHO05D005518 2.2e-22 110.2 198 42.9
CiPaw.04G043000 Carya illinoinensis HOM05D004795 ORTHO05D005518 2.2e-22 110.2 176 46.0
Potri.017G116100 Populus trichocarpa HOM05D004795 ORTHO05D005518 2.9e-22 109.8 196 42.3
CsaV3_3G020240 Cucumis sativus L. HOM05D004795 ORTHO05D005518 5.0e-22 109.0 189 43.4
Haze_14167 Corylus avellana HOM05D004795 ORTHO05D005518 8.5e-22 108.2 174 47.1
PGR004G2449 Punica granatum HOM05D004795 ORTHO05D005518 1.1e-21 107.8 162 49.4
HanXRQChr11g0330661 Helianthus annuus HOM05D004795 ORTHO05D005518 1.4e-21 107.5 157 47.8
Thecc.04G132300 Theobroma cacao HOM05D004795 ORTHO05D005518 1.9e-21 107.1 177 46.3
Duzib211G0180 Durio zibethinus HOM05D004795 ORTHO05D005518 2.5e-21 106.7 191 42.9
PGR042G3836 Punica granatum HOM05D004795 ORTHO05D005518 3.2e-21 106.3 157 49.7
MD09G1253700 Malus domestica HOM05D004795 ORTHO05D005518 4.2e-21 105.9 172 47.7
Sed0015257 Sechium edule HOM05D004795 ORTHO05D005518 5.5e-21 105.5 192 45.3
arahy.Tifrunner.gnm1.ann1.HZ9SBP Arachis hypogaea HOM05D001490 ORTHO05D005518 1.2e-20 104.4 173 46.8
ClCG05G012330 Citrullus lanatus HOM05D004795 ORTHO05D005518 1.2e-20 104.4 177 46.3
SalBow7G1622 Salvia bowleyana HOM05D004795 ORTHO05D005518 1.2e-20 104.4 128 54.7
SalBow7G4115 Salvia bowleyana HOM05D004795 ORTHO05D005518 1.2e-20 104.4 128 54.7
TWI53G1522 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 1.2e-20 104.4 174 43.7
MELO3C023735.2 Cucumis melo HOM05D004795 ORTHO05D005518 1.6e-20 104.0 191 41.9
Manes.01G111300 Manihot esculenta HOM05D004795 ORTHO05D005518 4.7e-20 102.4 170 42.9
Sc11g0008370 Simmondsia chinensis HOM05D004795 ORTHO05D005518 4.7e-20 102.4 189 46.0
Eucgr.J01506 Eucalyptus grandis HOM05D004795 ORTHO05D005518 6.1e-20 102.1 173 49.7
SalBow5G0757 Salvia bowleyana HOM05D004795 ORTHO05D005518 8.0e-20 101.7 91 68.1
TWI77G0518 Tripterygium wilfordii HOM05D004795 ORTHO05D005518 8.0e-20 101.7 177 44.1
Gohir.D11G325800 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.0e-19 101.3 197 42.1
VMungo1383G1737 Vigna mungo HOM05D004795 ORTHO05D005518 1.0e-19 101.3 164 45.7
Glyma.08G366700 Glycine max HOM05D004795 ORTHO05D005518 3.0e-19 99.8 156 46.2
Gohir.D11G325700 Gossypium hirsutum HOM05D004795 ORTHO05D005518 8.8e-19 98.2 186 42.5
Phvul.008G007200 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 8.8e-19 98.2 162 45.1
Cpa.g.sc170.57 Carica papaya HOM05D004795 ORTHO05D005518 1.1e-18 97.8 187 41.7
VMungo0464G1679 Vigna mungo HOM05D004795 ORTHO05D005518 1.1e-18 97.8 192 42.2
HanXRQChr11g0325401 Helianthus annuus HOM05D004795 ORTHO05D005518 1.5e-18 97.4 167 44.9
ECA232G0641 Erigeron canadensis HOM05D000072 ORTHO05D000026 2.0e-18 97.1 98 60.2
unitig_32.g11886 Utricularia gibba HOM05D004795 ORTHO05D005518 2.0e-18 97.1 172 40.7
Gohir.D11G326300 Gossypium hirsutum HOM05D004795 ORTHO05D005518 2.6e-18 96.7 199 40.7
BcaB06g27183 Brassica carinata HOM05D004795 ORTHO05D005518 3.3e-18 96.3 194 39.2
Ca_08078_v3 Cicer arietinum L. HOM05D004795 ORTHO05D005518 5.7e-18 95.5 163 43.6
Glyma.13G045200 Glycine max HOM05D004795 ORTHO05D005518 1.7e-17 94.0 192 42.7
Aa31LG9G17140 Aethionema arabicum HOM05D004795 ORTHO05D005518 1.1e-16 91.3 197 37.1
Carub.0002s1332 Capsella rubella HOM05D004795 ORTHO05D005518 1.4e-16 90.9 177 39.5
Gohir.A11G163900 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.4e-16 90.9 150 44.0
Gorai.007G182000 Gossypium raimondii HOM05D004795 ORTHO05D005518 1.4e-16 90.9 148 45.3
Lj1g0003158 Lotus japonicus HOM05D004795 ORTHO05D005518 1.4e-16 90.9 162 45.7
Solyc02g086140.2 Solanum lycopersicum HOM05D004795 ORTHO05D005518 1.8e-16 90.5 111 50.5
TAR622G0902 Trochodendron aralioides HOM05D004795 ORTHO05D005518 2.4e-16 90.1 188 40.4
Glyma.18G295700 Glycine max HOM05D004795 ORTHO05D005518 3.1e-16 89.7 220 37.3
Hma1.2p1_1109F.1_g258120 Hydrangea macrophylla HOM05D004795 ORTHO05D005518 3.1e-16 89.7 179 43.0
Sp5g21970 Schrenkiella parvula HOM05D004795 ORTHO05D005518 4.1e-16 89.4 183 37.7
TAR629G1480 Trochodendron aralioides HOM05D004795 ORTHO05D005518 7.0e-16 88.6 187 38.5
TPR.G31528 Trifolium pratense HOM05D004795 ORTHO05D005518 1.2e-15 87.8 175 38.9
A04p11270 Brassica napus HOM05D004795 ORTHO05D005518 1.6e-15 87.4 213 37.6
BraA04t16787Z Brassica rapa HOM05D004795 ORTHO05D005518 1.6e-15 87.4 213 37.6
THA.LOC104805574 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 1.6e-15 87.4 184 39.7
BcaC02g09641 Brassica carinata HOM05D004795 ORTHO05D005518 5.9e-15 85.5 178 38.2
BolC4t26077H Brassica oleracea HOM05D004795 ORTHO05D005518 5.9e-15 85.5 178 38.2
Lj2g0010000 Lotus japonicus HOM05D004795 ORTHO05D005518 5.9e-15 85.5 195 40.0
Lalb_Chr10g0091311 Lupinus albus HOM05D004795 ORTHO05D005518 1.0e-14 84.7 186 37.1
A07p33770 Brassica napus HOM05D004795 ORTHO05D005518 1.7e-14 84.0 173 38.2
C04p44990 Brassica napus HOM05D004795 ORTHO05D005518 1.7e-14 84.0 182 36.8
Thhalv10027906m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 1.7e-14 84.0 176 40.3
FAN05G2248 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.2e-14 83.6 172 43.6
FAN02G3195 Fragaria x ananassa HOM05D004795 ORTHO05D005518 2.9e-14 83.2 172 43.6
Sp7g03720 Schrenkiella parvula HOM05D004795 ORTHO05D005518 2.9e-14 83.2 194 36.1
Gohir.D12G053200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 5.0e-14 82.4 157 42.0
AT1G67035 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 8.5e-14 81.6 179 35.8
C02p22330 Brassica napus HOM05D004795 ORTHO05D005518 8.5e-14 81.6 175 38.3
TAR371G0696 Trochodendron aralioides HOM05D004795 ORTHO05D005518 8.5e-14 81.6 189 37.6
BraA02t06447Z Brassica rapa HOM05D004795 ORTHO05D005518 1.1e-13 81.3 172 36.6
FAN14G2363 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.1e-13 81.3 172 41.3
FAN14G5069 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.1e-13 81.3 172 41.3
BraA07t31003Z Brassica rapa HOM05D004795 ORTHO05D005518 1.5e-13 80.9 170 35.3
Psat3g098240 Pisum sativum HOM05D004795 ORTHO05D005518 1.5e-13 80.9 169 40.2
AUR62023290 Chenopodium quinoa HOM05D004795 ORTHO05D005518 1.9e-13 80.5 99 53.5
CARHR214290 Cardamine hirsuta HOM05D004795 ORTHO05D005518 2.5e-13 80.1 183 37.7
AUR62043981 Chenopodium quinoa HOM05D004795 ORTHO05D005518 2.5e-13 80.1 236 32.6
PSO532G0010 Papaver somniferum HOM05D004795 ORTHO05D005518 2.5e-13 80.1 146 39.0
RcHm_v2.0_Chr2g0148201 Rosa chinensis HOM05D004795 ORTHO05D005518 2.5e-13 80.1 176 40.3
THA.LOC104822635 Tarenaya hassleriana HOM05D004795 ORTHO05D005518 3.2e-13 79.7 205 38.0
Aa31LG2G3430 Aethionema arabicum HOM05D004795 ORTHO05D005518 4.2e-13 79.3 188 36.2
AT5G38300 Arabidopsis thaliana HOM05D004795 ORTHO05D005518 4.2e-13 79.3 215 34.9
Gorai.008G056400 Gossypium raimondii HOM05D004795 ORTHO05D005518 4.2e-13 79.3 157 40.8
Thhalv10019032m.g Eutrema salsugineum HOM05D004795 ORTHO05D005518 5.5e-13 79.0 189 37.6
FvH4_6g36230 Fragaria vesca HOM05D004795 ORTHO05D005518 5.5e-13 79.0 170 41.2
Phvul.004G066100 Phaseolus vulgaris HOM05D004795 ORTHO05D005518 7.2e-13 78.6 191 39.8
Ah.06g188560 Amaranthus hybridus HOM05D004795 ORTHO05D005518 9.4e-13 78.2 123 39.8
Glyma.19G049900 Glycine max HOM05D004795 ORTHO05D005518 9.4e-13 78.2 184 38.0
Nn3g17899 Nelumbo nucifera HOM05D004795 ORTHO05D005518 9.4e-13 78.2 194 35.6
AL7G52500 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 1.2e-12 77.8 215 33.0
FAN09G4185 Fragaria x ananassa HOM05D004795 ORTHO05D005518 1.6e-12 77.4 173 41.0
Carub.0005s1274 Capsella rubella HOM05D004795 ORTHO05D005518 2.1e-12 77.0 182 36.8
PSO541G1476 Papaver somniferum HOM05D004795 ORTHO05D005518 2.1e-12 77.0 161 36.0
BolC2t08386H Brassica oleracea HOM05D004795 ORTHO05D005518 2.7e-12 76.6 177 37.9
unitig_748.g8746 Utricularia gibba HOM05D004795 ORTHO05D005518 2.7e-12 76.6 126 42.1
AL2G25370 Arabidopsis lyrata HOM05D004795 ORTHO05D005518 3.6e-12 76.3 172 35.5
Gohir.A12G054400 Gossypium hirsutum HOM05D004795 ORTHO05D005518 3.6e-12 76.3 157 39.5
AUR62009011 Chenopodium quinoa HOM05D004795 ORTHO05D005518 4.7e-12 75.9 99 52.5
BcaC03g14785 Brassica carinata HOM05D004795 ORTHO05D005518 1.0e-11 74.7 182 36.3
PSO541G4271 Papaver somniferum HOM05D004795 ORTHO05D005518 1.0e-11 74.7 156 35.9
C06p43160 Brassica napus HOM05D004795 ORTHO05D005518 1.8e-11 73.9 177 36.2
Lalb_Chr02g0158191 Lupinus albus HOM05D004795 ORTHO05D005518 3.0e-11 73.2 175 37.1
Medtr7g082230 Medicago truncatula HOM05D004795 ORTHO05D005518 4.0e-11 72.8 168 36.9
BolC6t39123H Brassica oleracea HOM05D004795 ORTHO05D005518 6.7e-11 72.0 170 35.9
CARHR059450 Cardamine hirsuta HOM05D004795 ORTHO05D005518 8.8e-11 71.6 187 35.8
BcaB05g24226 Brassica carinata HOM05D004795 ORTHO05D005518 1.2e-10 71.2 210 35.7
BcaNung06250 Brassica carinata HOM05D004795 ORTHO05D005518 1.2e-10 71.2 175 34.9
ATR0752G028 Amborella trichopoda HOM05D004795 ORTHO05D005518 2.6e-10 70.1 182 33.5
Gorai.001G202200 Gossypium raimondii HOM05D004795 ORTHO05D005518 2.6e-10 70.1 147 38.8
SalBow3G3444 Salvia bowleyana HOM05D004795 ORTHO05D005518 2.6e-10 70.1 55 63.6
Actinidia15890 Actinidia chinensis HOM05D004795 ORTHO05D005518 3.3e-10 69.7 191 34.6
Potri.004G098200 Populus trichocarpa HOM05D004795 ORTHO05D005518 4.4e-10 69.3 112 42.0
MBI09_g36997_MAGBIO Magnolia biondii HOM05D004795 ORTHO05D005518 9.7e-10 68.2 160 37.5
Gohir.D11G170200 Gossypium hirsutum HOM05D004795 ORTHO05D005518 1.3e-09 67.8 216 32.4
Gorai.007G356700 Gossypium raimondii HOM05D004795 ORTHO05D005518 8.2e-09 65.1 157 36.9
CAN.G358.61 Capsicum annuum HOM05D004795 ORTHO05D005518 1.0e-06 58.2 70 54.3
Medtr6g018780 Medicago truncatula HOM05D004795 ORTHO05D005518 1.3e-06 57.8 101 44.6
SGA_v2.0_scaffold110G31184 Striga asiatica HOM05D000389 ORTHO05D000287 1.7e-06 57.4 28 96.4
Aqoxy3G00247 Aquilegia oxysepala HOM05D004795 ORTHO05D005518 2.9e-06 56.6 186 32.8
TPR.G32442 Trifolium pratense HOM05D004795 ORTHO05D005518 8.5e-06 55.1 101 42.6


User provided reference genes

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